RNA–Protein interactions for RNA: ENST00000395205.6

BBS4-202, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best) BASIC

Gene BBS4, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-202ENST00000395205 USP48Q86UV5 1035 aa11.43□□□□□ -0.58
BBS4-202ENST00000395205 ACER1Q8TDN7 264 aa11.43□□□□□ -0.58
BBS4-202ENST00000395205 ZC3H15Q8WU90 426 aaKnown RBP11.43□□□□□ -0.58
BBS4-202ENST00000395205 CPVLQ9H3G5 476 aa11.43□□□□□ -0.58
BBS4-202ENST00000395205 RBM27Q9P2N5 1060 aaKnown RBP11.43□□□□□ -0.58
BBS4-202ENST00000395205 CLEC11AQ9Y240 323 aa11.43□□□□□ -0.58
BBS4-202ENST00000395205 SRCAPQ6ZRS2 3230 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 A0A1W2PRG0 241 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 ECE1P42892 770 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 RESTQ13127 1097 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 GPATCH4Q5T3I0 446 aaKnown RBP11.42□□□□□ -0.58
BBS4-202ENST00000395205 PNMA8AQ86V59 439 aaPredicted RBP11.42□□□□□ -0.58
BBS4-202ENST00000395205 DCAF4Q8WV16 495 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 WRNIP1Q96S55 665 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 FZD1Q9UP38 647 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 UTRNP46939 3433 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 POTECB2RU33 542 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 CYTH3O43739 400 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 SCG2P13521 617 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 SMARCA1P28370 1054 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 INPP5BP32019 993 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 SAFBQ15424 915 aaKnown RBP eCLIP11.42□□□□□ -0.58
BBS4-202ENST00000395205 GLIPR1L2Q4G1C9 344 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 TTBK2Q6IQ55 1244 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 FAM173BQ6P4H8 233 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 CCDC84Q86UT8 332 aaPredicted RBP11.42□□□□□ -0.58
BBS4-202ENST00000395205 GMCL1P1Q8NEA9 526 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 RRP36Q96EU6 259 aaKnown RBP11.42□□□□□ -0.58
BBS4-202ENST00000395205 SPZ1Q9BXG8 430 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 GOPCQ9HD26 462 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 GINM1Q9NU53 330 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 VPS54Q9P1Q0 977 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 KCNJ14Q9UNX9 436 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 TMX2Q9Y320 296 aa11.42□□□□□ -0.58
BBS4-202ENST00000395205 SIPA1L1O43166 1804 aa11.41□□□□□ -0.58
BBS4-202ENST00000395205 DDX11L8A8MPP1 907 aa11.41□□□□□ -0.58
BBS4-202ENST00000395205 NDUFB10O96000 172 aa11.41□□□□□ -0.58
BBS4-202ENST00000395205 DNM1Q05193 864 aaKnown RBP11.41□□□□□ -0.58
BBS4-202ENST00000395205 ZYXQ15942 572 aaKnown RBP11.41□□□□□ -0.58
BBS4-202ENST00000395205 PFKFB3Q16875 520 aaPredicted RBP11.41□□□□□ -0.58
BBS4-202ENST00000395205 HOMER1Q86YM7 354 aa11.41□□□□□ -0.58
BBS4-202ENST00000395205 SPICE1Q8N0Z3 855 aa11.41□□□□□ -0.58
BBS4-202ENST00000395205 RGS22Q8NE09 1264 aa11.41□□□□□ -0.58
BBS4-202ENST00000395205 ZKSCAN4Q969J2 545 aaPredicted RBP11.41□□□□□ -0.58
BBS4-202ENST00000395205 SH2D4AQ9H788 454 aa11.41□□□□□ -0.58
BBS4-202ENST00000395205 PICK1Q9NRD5 415 aa11.41□□□□□ -0.58
BBS4-202ENST00000395205 SEC63Q9UGP8 760 aaKnown RBP11.41□□□□□ -0.58
BBS4-202ENST00000395205 ZNF112Q9UJU3 913 aa11.41□□□□□ -0.58
BBS4-202ENST00000395205 SYNPO2Q9UMS6 1093 aa11.41□□□□□ -0.58
BBS4-202ENST00000395205 SLC16A2P36021 539 aa11.41□□□□□ -0.58
BBS4-202ENST00000395205 IKQ13123 557 aaPredicted RBP11.41□□□□□ -0.58
BBS4-202ENST00000395205 SLC35G1Q2M3R5 365 aa11.41□□□□□ -0.58
BBS4-202ENST00000395205 NUP88Q99567 741 aaPredicted RBP11.41□□□□□ -0.58
BBS4-202ENST00000395205 FEZ1Q99689 392 aa11.41□□□□□ -0.58
BBS4-202ENST00000395205 RRAGCQ9HB90 399 aa11.41□□□□□ -0.58
BBS4-202ENST00000395205 BMP3P12645 472 aa11.4□□□□□ -0.58
BBS4-202ENST00000395205 HEATR3Q7Z4Q2 680 aa11.4□□□□□ -0.58
BBS4-202ENST00000395205 SCYL3Q8IZE3 742 aa11.4□□□□□ -0.58
BBS4-202ENST00000395205 KLRG1Q96E93 195 aa11.4□□□□□ -0.58
BBS4-202ENST00000395205 GMCL1Q96IK5 515 aa11.4□□□□□ -0.58
BBS4-202ENST00000395205 PIGSQ96S52 555 aa11.4□□□□□ -0.58
BBS4-202ENST00000395205 RIOX1Q9H6W3 641 aa11.4□□□□□ -0.58
BBS4-202ENST00000395205 RNF216Q9NWF9 866 aaPredicted RBP11.4□□□□□ -0.58
BBS4-202ENST00000395205 PPP1R12BO60237 982 aaPredicted RBP11.4□□□□□ -0.59
BBS4-202ENST00000395205 PRPF40AO75400 957 aaKnown RBP11.4□□□□□ -0.59
BBS4-202ENST00000395205 USP2O75604 605 aaPredicted RBP11.4□□□□□ -0.59
BBS4-202ENST00000395205 MMP1P03956 469 aa11.4□□□□□ -0.59
BBS4-202ENST00000395205 VEGFAP15692 232 aaPredicted RBP11.4□□□□□ -0.59
BBS4-202ENST00000395205 NF2P35240 595 aa11.4□□□□□ -0.59
BBS4-202ENST00000395205 NLRP5P59047 1200 aa11.4□□□□□ -0.59
BBS4-202ENST00000395205 KIF23Q02241 960 aaPredicted RBP11.4□□□□□ -0.59
BBS4-202ENST00000395205 ADGRF4Q8IZF3 695 aa11.4□□□□□ -0.59
BBS4-202ENST00000395205 GLIS2Q9BZE0 524 aaPredicted RBP11.4□□□□□ -0.59
BBS4-202ENST00000395205 TFIP11Q9UBB9 837 aaKnown RBP11.4□□□□□ -0.59
BBS4-202ENST00000395205 CNPY2Q9Y2B0 182 aa11.4□□□□□ -0.59
BBS4-202ENST00000395205 TMEM232C9JQI7 657 aa11.39□□□□□ -0.59
BBS4-202ENST00000395205 KRT85P78386 507 aa11.39□□□□□ -0.59
BBS4-202ENST00000395205 GPKOWQ92917 476 aaPredicted RBP eCLIP11.39□□□□□ -0.59
BBS4-202ENST00000395205 VCPKMTQ9H867 229 aa11.39□□□□□ -0.59
BBS4-202ENST00000395205 GDPD2Q9HCC8 539 aa11.39□□□□□ -0.59
BBS4-202ENST00000395205 GOLGA6L3A6NEY3 463 aa11.38□□□□□ -0.59
BBS4-202ENST00000395205 BTBD18B2RXH4 712 aa11.38□□□□□ -0.59
BBS4-202ENST00000395205 KIF28PB7ZC32 967 aa11.38□□□□□ -0.59
BBS4-202ENST00000395205 PTMSP20962 102 aa11.38□□□□□ -0.59
BBS4-202ENST00000395205 MAP3K9P80192 1104 aa11.38□□□□□ -0.59
BBS4-202ENST00000395205 TTLL12Q14166 644 aaPredicted RBP11.38□□□□□ -0.59
BBS4-202ENST00000395205 BRAPQ7Z569 592 aa11.38□□□□□ -0.59
BBS4-202ENST00000395205 DIS3L2Q8IYB7 885 aaKnown RBP11.38□□□□□ -0.59
BBS4-202ENST00000395205 CDCA5Q96FF9 252 aa11.38□□□□□ -0.59
BBS4-202ENST00000395205 ZNF396Q96N95 335 aaPredicted RBP11.38□□□□□ -0.59
BBS4-202ENST00000395205 JMJD4Q9H9V9 463 aa11.38□□□□□ -0.59
BBS4-202ENST00000395205 AS3MTQ9HBK9 375 aa11.38□□□□□ -0.59
BBS4-202ENST00000395205 BRMS1Q9HCU9 246 aa11.38□□□□□ -0.59
BBS4-202ENST00000395205 FSD2A1L4K1 749 aa11.38□□□□□ -0.59
BBS4-202ENST00000395205 USP17L10C9JJH3 530 aa11.38□□□□□ -0.59
BBS4-202ENST00000395205 FIBPO43427 364 aa11.38□□□□□ -0.59
BBS4-202ENST00000395205 PTPRAP18433 802 aa11.38□□□□□ -0.59
BBS4-202ENST00000395205 KIAA1755Q5JYT7 1200 aa11.38□□□□□ -0.59
BBS4-202ENST00000395205 PHF20Q9BVI0 1012 aa11.38□□□□□ -0.59
BBS4-202ENST00000395205 SH3GLB2Q9NR46 395 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms