RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 TMEM164Q5U3C3 297 aa13.5□□□□□ -0.25
RTN1-203ENST00000395090 STOX1Q6ZVD7 989 aa13.5□□□□□ -0.25
RTN1-203ENST00000395090 NEK1Q96PY6 1258 aa13.5□□□□□ -0.25
RTN1-203ENST00000395090 NAPBQ9H115 298 aa13.5□□□□□ -0.25
RTN1-203ENST00000395090 TTF2Q9UNY4 1162 aaKnown RBP13.5□□□□□ -0.25
RTN1-203ENST00000395090 KIAA1024Q9UPX6 916 aa13.5□□□□□ -0.25
RTN1-203ENST00000395090 CYP46A1Q9Y6A2 500 aa13.5□□□□□ -0.25
RTN1-203ENST00000395090 WASF2Q9Y6W5 498 aa13.5□□□□□ -0.25
RTN1-203ENST00000395090 COL4A5P29400 1685 aa13.49□□□□□ -0.25
RTN1-203ENST00000395090 CARNS1A5YM72 827 aa13.49□□□□□ -0.25
RTN1-203ENST00000395090 HMGB1P09429 215 aaKnown RBP13.49□□□□□ -0.25
RTN1-203ENST00000395090 DPYDQ12882 1025 aa13.49□□□□□ -0.25
RTN1-203ENST00000395090 HSCBQ8IWL3 235 aa13.49□□□□□ -0.25
RTN1-203ENST00000395090 NIM1KQ8IY84 436 aa13.49□□□□□ -0.25
RTN1-203ENST00000395090 SIX5Q8N196 739 aa13.49□□□□□ -0.25
RTN1-203ENST00000395090 ZNF784Q8NCA9 323 aaPredicted RBP13.49□□□□□ -0.25
RTN1-203ENST00000395090 SDR42E1Q8WUS8 393 aa13.49□□□□□ -0.25
RTN1-203ENST00000395090 GMLQ99445 158 aa13.49□□□□□ -0.25
RTN1-203ENST00000395090 NOL10Q9BSC4 688 aaKnown RBP13.49□□□□□ -0.25
RTN1-203ENST00000395090 DCP1AQ9NPI6 582 aaPredicted RBP13.49□□□□□ -0.25
RTN1-203ENST00000395090 CYLDQ9NQC7 956 aa13.49□□□□□ -0.25
RTN1-203ENST00000395090 ANAPC4Q9UJX5 808 aa13.49□□□□□ -0.25
RTN1-203ENST00000395090 DAGLAQ9Y4D2 1042 aa13.49□□□□□ -0.25
RTN1-203ENST00000395090 K7ELQ4 463 aaPredicted RBP13.48□□□□□ -0.25
RTN1-203ENST00000395090 GDF9O60383 454 aa13.48□□□□□ -0.25
RTN1-203ENST00000395090 BTDP43251 543 aa13.48□□□□□ -0.25
RTN1-203ENST00000395090 RHBDL3P58872 404 aa13.48□□□□□ -0.25
RTN1-203ENST00000395090 COL9A3Q14050 684 aaPredicted RBP13.48□□□□□ -0.25
RTN1-203ENST00000395090 SBK1Q52WX2 424 aa13.48□□□□□ -0.25
RTN1-203ENST00000395090 BLOC1S2Q6QNY1 142 aa13.48□□□□□ -0.25
RTN1-203ENST00000395090 SH3RF3Q8TEJ3 882 aaPredicted RBP13.48□□□□□ -0.25
RTN1-203ENST00000395090 ZDHHC15Q96MV8 337 aa13.48□□□□□ -0.25
RTN1-203ENST00000395090 ANP32EQ9BTT0 268 aa13.48□□□□□ -0.25
RTN1-203ENST00000395090 ZNF646O15015 1829 aaPredicted RBP13.48□□□□□ -0.25
RTN1-203ENST00000395090 ARFGEF1Q9Y6D6 1849 aa13.48□□□□□ -0.25
RTN1-203ENST00000395090 MYO3BQ8WXR4 1341 aa13.48□□□□□ -0.25
RTN1-203ENST00000395090 MYH2Q9UKX2 1941 aa13.48□□□□□ -0.25
RTN1-203ENST00000395090 CPA1P15085 419 aa13.47□□□□□ -0.25
RTN1-203ENST00000395090 RPS6KB1P23443 525 aa13.47□□□□□ -0.25
RTN1-203ENST00000395090 HAND2P61296 217 aa13.47□□□□□ -0.25
RTN1-203ENST00000395090 EXOSC10Q01780 885 aaKnown RBP13.47□□□□□ -0.25
RTN1-203ENST00000395090 NNTQ13423 1086 aa13.47□□□□□ -0.25
RTN1-203ENST00000395090 APOBEC3HQ6NTF7 200 aaKnown RBP13.47□□□□□ -0.25
RTN1-203ENST00000395090 CTR9Q6PD62 1173 aa13.47□□□□□ -0.25
RTN1-203ENST00000395090 DHX32Q7L7V1 743 aaKnown RBP13.47□□□□□ -0.25
RTN1-203ENST00000395090 JDP2Q8WYK2 163 aa13.47□□□□□ -0.25
RTN1-203ENST00000395090 TEKT1Q969V4 418 aa13.47□□□□□ -0.25
RTN1-203ENST00000395090 PDRG1Q9NUG6 133 aa13.47□□□□□ -0.25
RTN1-203ENST00000395090 PGPEP1Q9NXJ5 209 aa13.47□□□□□ -0.25
RTN1-203ENST00000395090 GOLGB1Q14789 3259 aaKnown RBP13.47□□□□□ -0.25
RTN1-203ENST00000395090 F8W031 263 aaPredicted RBP13.46□□□□□ -0.25
RTN1-203ENST00000395090 TNFRSF10AO00220 468 aa13.46□□□□□ -0.25
RTN1-203ENST00000395090 PSMD14O00487 310 aa13.46□□□□□ -0.25
RTN1-203ENST00000395090 RAD17O75943 681 aa13.46□□□□□ -0.25
RTN1-203ENST00000395090 FGRP09769 529 aa13.46□□□□□ -0.25
RTN1-203ENST00000395090 TDO2P48775 406 aa13.46□□□□□ -0.25
RTN1-203ENST00000395090 PRELPP51888 382 aa13.46□□□□□ -0.25
RTN1-203ENST00000395090 CXCL9Q07325 125 aa13.46□□□□□ -0.25
RTN1-203ENST00000395090 KIAA0825Q8IV33 1275 aa13.46□□□□□ -0.25
RTN1-203ENST00000395090 CYP4X1Q8N118 509 aa13.46□□□□□ -0.25
RTN1-203ENST00000395090 FBXL16Q8N461 479 aa13.46□□□□□ -0.25
RTN1-203ENST00000395090 TPCN2Q8NHX9 752 aa13.46□□□□□ -0.25
RTN1-203ENST00000395090 TTC24A2A3L6 582 aaPredicted RBP13.46□□□□□ -0.26
RTN1-203ENST00000395090 CRKP46108 304 aa13.46□□□□□ -0.26
RTN1-203ENST00000395090 SCNN1DP51172 638 aa13.46□□□□□ -0.26
RTN1-203ENST00000395090 AK2P54819 239 aa13.46□□□□□ -0.26
RTN1-203ENST00000395090 PPARAQ07869 468 aa13.46□□□□□ -0.26
RTN1-203ENST00000395090 KCTD17Q8N5Z5 321 aa13.46□□□□□ -0.26
RTN1-203ENST00000395090 AGBL3Q8NEM8 1001 aa13.46□□□□□ -0.26
RTN1-203ENST00000395090 AGXT2Q9BYV1 514 aa13.46□□□□□ -0.26
RTN1-203ENST00000395090 PSME4Q14997 1843 aa13.45□□□□□ -0.26
RTN1-203ENST00000395090 FZD9O00144 591 aa13.45□□□□□ -0.26
RTN1-203ENST00000395090 MMP14P50281 582 aa13.45□□□□□ -0.26
RTN1-203ENST00000395090 AKNAD1Q5T1N1 836 aa13.45□□□□□ -0.26
RTN1-203ENST00000395090 TBC1D10CQ8IV04 446 aa13.45□□□□□ -0.26
RTN1-203ENST00000395090 NCOA7Q8NI08 942 aa13.45□□□□□ -0.26
RTN1-203ENST00000395090 STAG1Q8WVM7 1258 aa13.45□□□□□ -0.26
RTN1-203ENST00000395090 WDR19Q8NEZ3 1342 aa13.45□□□□□ -0.26
RTN1-203ENST00000395090 DKK1O94907 266 aa13.44□□□□□ -0.26
RTN1-203ENST00000395090 PCP11498 1178 aaKnown RBP13.44□□□□□ -0.26
RTN1-203ENST00000395090 USP5P45974 858 aa13.44□□□□□ -0.26
RTN1-203ENST00000395090 TNIP1Q15025 636 aa13.44□□□□□ -0.26
RTN1-203ENST00000395090 ANKRD1Q15327 319 aa13.44□□□□□ -0.26
RTN1-203ENST00000395090 MB21D2Q8IYB1 491 aaPredicted RBP13.44□□□□□ -0.26
RTN1-203ENST00000395090 TEX11Q8IYF3 940 aa13.44□□□□□ -0.26
RTN1-203ENST00000395090 TGFBRAP1Q8WUH2 860 aa13.44□□□□□ -0.26
RTN1-203ENST00000395090 TMX3Q96JJ7 454 aa13.44□□□□□ -0.26
RTN1-203ENST00000395090 ARPP21Q9UBL0 812 aaPredicted RBP13.44□□□□□ -0.26
RTN1-203ENST00000395090 LIMCH1Q9UPQ0 1083 aa13.44□□□□□ -0.26
RTN1-203ENST00000395090 TACC3Q9Y6A5 838 aa13.44□□□□□ -0.26
RTN1-203ENST00000395090 LILRA1O75019 489 aa13.43□□□□□ -0.26
RTN1-203ENST00000395090 SEC13P55735 322 aa13.43□□□□□ -0.26
RTN1-203ENST00000395090 RASSF7Q02833 373 aa13.43□□□□□ -0.26
RTN1-203ENST00000395090 TRDNQ13061 729 aa13.43□□□□□ -0.26
RTN1-203ENST00000395090 C12orf60Q5U649 245 aa13.43□□□□□ -0.26
RTN1-203ENST00000395090 CIAPIN1Q6FI81 312 aa13.43□□□□□ -0.26
RTN1-203ENST00000395090 CDC42EP5Q6NZY7 148 aa13.43□□□□□ -0.26
RTN1-203ENST00000395090 MFSD6Q6ZSS7 791 aa13.43□□□□□ -0.26
RTN1-203ENST00000395090 RNF41Q9H4P4 317 aaPredicted RBP13.43□□□□□ -0.26
RTN1-203ENST00000395090 CNNM2Q9H8M5 875 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms