RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 NFE2L3Q9Y4A8 694 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 DTNBO60941 627 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 GOLGA8HP0CJ92 632 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 ATF7P17544 494 aaPredicted RBP11.48□□□□□ -0.57
COL4A6-203ENST00000394872 KRT81Q14533 505 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 CCDC105Q8IYK2 499 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 DDX25Q9UHL0 483 aaKnown RBP11.48□□□□□ -0.57
COL4A6-203ENST00000394872 TRPC5Q9UL62 973 aaPredicted RBP11.48□□□□□ -0.57
COL4A6-203ENST00000394872 ZMYM4Q5VZL5 1548 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 LACTBP83111 547 aaPredicted RBP11.47□□□□□ -0.57
COL4A6-203ENST00000394872 IFRD2Q12894 506 aaPredicted RBP11.47□□□□□ -0.57
COL4A6-203ENST00000394872 RRAGAQ7L523 313 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 SWAP70Q9UH65 585 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 ZFYVE16Q7Z3T8 1539 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 OATP04181 439 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 IGBP1P78318 339 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 PEX26Q7Z412 305 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 TMTC1Q8IUR5 882 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 NLGN1Q8N2Q7 840 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 SUGCTQ9HAC7 445 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 CCPG1Q9ULG6 757 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 PCDHA12Q9UN75 941 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 THRAP3Q9Y2W1 955 aaKnown RBP11.47□□□□□ -0.57
COL4A6-203ENST00000394872 KIF21AQ7Z4S6 1674 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 ABCB5Q2M3G0 1257 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 CEP85LQ5SZL2 805 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 TYW1BQ6NUM6 668 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 TRMT44Q8IYL2 757 aaKnown RBP11.47□□□□□ -0.57
COL4A6-203ENST00000394872 PNMA1Q8ND90 353 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 FAM207AQ9NSI2 230 aaPredicted RBP11.47□□□□□ -0.57
COL4A6-203ENST00000394872 CAPN9O14815 690 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 POLA2Q14181 598 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 PSMB7Q99436 277 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 MAP3K15Q6ZN16 1313 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 CRKLP46109 303 aaKnown RBP11.47□□□□□ -0.57
COL4A6-203ENST00000394872 BSPRYQ5W0U4 402 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 PANK4Q9NVE7 773 aa11.47□□□□□ -0.57
COL4A6-203ENST00000394872 ZNF804BA4D1E1 1349 aa11.46□□□□□ -0.57
COL4A6-203ENST00000394872 TRIM37O94972 964 aa11.46□□□□□ -0.57
COL4A6-203ENST00000394872 PCCAP05165 728 aaPredicted RBP11.46□□□□□ -0.57
COL4A6-203ENST00000394872 RPS6KA1Q15418 735 aa11.46□□□□□ -0.57
COL4A6-203ENST00000394872 LGSNQ5TDP6 509 aa11.46□□□□□ -0.57
COL4A6-203ENST00000394872 SCYL2Q6P3W7 929 aa11.46□□□□□ -0.57
COL4A6-203ENST00000394872 SND1Q7KZF4 910 aaKnown RBP eCLIP11.46□□□□□ -0.57
COL4A6-203ENST00000394872 AFAP1L1Q8TED9 768 aa11.46□□□□□ -0.57
COL4A6-203ENST00000394872 NLRC4Q9NPP4 1024 aa11.46□□□□□ -0.57
COL4A6-203ENST00000394872 MLH3Q9UHC1 1453 aa11.46□□□□□ -0.57
COL4A6-203ENST00000394872 LOC102724428A0A0B4J2F2 783 aa11.46□□□□□ -0.57
COL4A6-203ENST00000394872 KLRF2D3W0D1 207 aa11.46□□□□□ -0.57
COL4A6-203ENST00000394872 PDE6AP16499 860 aa11.46□□□□□ -0.57
COL4A6-203ENST00000394872 POLGP54098 1239 aaPredicted RBP11.46□□□□□ -0.57
COL4A6-203ENST00000394872 SIK1P57059 783 aa11.46□□□□□ -0.57
COL4A6-203ENST00000394872 PLA2G4DQ86XP0 818 aa11.46□□□□□ -0.57
COL4A6-203ENST00000394872 EPSTI1Q96J88 318 aa11.46□□□□□ -0.57
COL4A6-203ENST00000394872 PLEKHG3A1L390 1219 aa11.46□□□□□ -0.57
COL4A6-203ENST00000394872 TMEM232C9JQI7 657 aa11.46□□□□□ -0.57
COL4A6-203ENST00000394872 XRCC5P13010 732 aaKnown RBP11.46□□□□□ -0.57
COL4A6-203ENST00000394872 MAN1A1P33908 653 aa11.46□□□□□ -0.57
COL4A6-203ENST00000394872 SLC12A2P55011 1212 aa11.46□□□□□ -0.57
COL4A6-203ENST00000394872 MYOCDQ8IZQ8 938 aa11.46□□□□□ -0.57
COL4A6-203ENST00000394872 NUCKS1Q9H1E3 243 aaKnown RBP11.46□□□□□ -0.57
COL4A6-203ENST00000394872 LRRC24Q50LG9 513 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 FAM160B1Q5W0V3 765 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 SLFN13Q68D06 897 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 CCDC84Q86UT8 332 aaPredicted RBP11.46□□□□□ -0.58
COL4A6-203ENST00000394872 U2AF1L4Q8WU68 220 aaKnown RBP11.46□□□□□ -0.58
COL4A6-203ENST00000394872 MAIP1Q8WWC4 291 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 PRPF31Q8WWY3 499 aaKnown RBP11.46□□□□□ -0.58
COL4A6-203ENST00000394872 GPKOWQ92917 476 aaPredicted RBP eCLIP11.46□□□□□ -0.58
COL4A6-203ENST00000394872 IMPACTQ9P2X3 320 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 CLRN2A0PK11 232 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 GOLGA6CA6NDK9 693 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 GOLGA6BA6NDN3 693 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 STAM2O75886 525 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 GOLGA6DP0CG33 693 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 TMOD1P28289 359 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 ZNF75DP51815 510 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 DMP1Q13316 513 aaPredicted RBP11.46□□□□□ -0.58
COL4A6-203ENST00000394872 MTX1Q13505 466 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 PPFIBP2Q8ND30 876 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 GOLGA6AQ9NYA3 693 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 KIAA0232Q92628 1395 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 ZMYM6O95789 1325 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 GKAP1Q5VSY0 366 aaPredicted RBP11.46□□□□□ -0.58
COL4A6-203ENST00000394872 HHATQ5VTY9 493 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 DPP9Q86TI2 863 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 TRIM50Q86XT4 487 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 RPUSD2Q8IZ73 545 aaKnown RBP11.46□□□□□ -0.58
COL4A6-203ENST00000394872 RSAD2Q8WXG1 361 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 ERO1AQ96HE7 468 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 TACC3Q9Y6A5 838 aa11.46□□□□□ -0.58
COL4A6-203ENST00000394872 TBC1D8O95759 1140 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 GTF3C6Q969F1 213 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 RBSNQ9H1K0 784 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 KDM5AP29375 1690 aaKnown RBP11.45□□□□□ -0.58
COL4A6-203ENST00000394872 TNKSO95271 1327 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 PER1O15534 1290 aaPredicted RBP11.45□□□□□ -0.58
COL4A6-203ENST00000394872 NEK8Q86SG6 692 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 SLF1Q9BQI6 1058 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 NRBP2Q9NSY0 501 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms