RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 MAGEC2Q9UBF1 373 aaPredicted RBP11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 MYO6Q9UM54 1294 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 ZBTB1Q9Y2K1 713 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 V9GY48 417 aaPredicted RBP11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 KCNJ18B7U540 433 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 FUT2Q10981 343 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 PTGDRQ13258 359 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 KCNJ12Q14500 433 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 PTPN21Q16825 1174 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 CAVIN4Q5BKX8 364 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 USP49Q70CQ1 688 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 RETREG2Q8NC44 543 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 TNFRSF25Q93038 417 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 THAP9Q9H5L6 903 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 ZNHIT6Q9NWK9 470 aaKnown RBP11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 PUF60Q9UHX1 559 aaKnown RBP11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 ADAM21Q9UKJ8 722 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 TACC3Q9Y6A5 838 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 NHSL1Q5SYE7 1610 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 ZNF804BA4D1E1 1349 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 A0A087X0B3 334 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 ORC4O43929 436 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 HOXA7P31268 230 aaPredicted RBP11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 KRT9P35527 623 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 NLRP5P59047 1200 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 KCNB1Q14721 858 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 E2F4Q16254 413 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 NOM1Q5C9Z4 860 aaKnown RBP11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 FAM114A1Q8IWE2 563 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 MIGA1Q8NAN2 632 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 OR8K1Q8NGG5 319 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 NELFBQ8WX92 580 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 CUEDC2Q9H467 287 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 L1RE1Q9UN81 338 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 MYH13Q9UKX3 1938 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 PSMD14O00487 310 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 LAD1O00515 517 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 RPN1P04843 607 aaKnown RBP11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 SCG2P13521 617 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 ACTN2P35609 894 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 CYLC1P35663 651 aaPredicted RBP11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 STAT6P42226 847 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 FXR1P51114 621 aaKnown RBP eCLIP11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 UBE4AQ14139 1066 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 ZNF174Q15697 407 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 GALNT17Q6IS24 598 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 PDXDC2PQ6P474 469 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 CMTR1Q8N1G2 835 aaKnown RBP11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 RUBCNQ92622 972 aa11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 MKRN1Q9UHC7 482 aaKnown RBP11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 LUC7L2Q9Y383 392 aaKnown RBP11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 EPN1Q9Y6I3 576 aaPredicted RBP11.31□□□□□ -0.6
UBE2D3-208ENST00000394803 PHLPP1O60346 1717 aa11.3□□□□□ -0.6
UBE2D3-208ENST00000394803 PDS5AQ29RF7 1337 aaKnown RBP11.3□□□□□ -0.6
UBE2D3-208ENST00000394803 TARSL2A2RTX5 802 aaKnown RBP11.3□□□□□ -0.6
UBE2D3-208ENST00000394803 PSMA7O14818 248 aa11.3□□□□□ -0.6
UBE2D3-208ENST00000394803 KRT86O43790 486 aa11.3□□□□□ -0.6
UBE2D3-208ENST00000394803 RPS6KA5O75582 802 aa11.3□□□□□ -0.6
UBE2D3-208ENST00000394803 CCT6AP40227 531 aaKnown RBP11.3□□□□□ -0.6
UBE2D3-208ENST00000394803 LMAN1P49257 510 aa11.3□□□□□ -0.6
UBE2D3-208ENST00000394803 GNAQP50148 359 aa11.3□□□□□ -0.6
UBE2D3-208ENST00000394803 BCAMP50895 628 aa11.3□□□□□ -0.6
UBE2D3-208ENST00000394803 UBXN1Q04323 297 aa11.3□□□□□ -0.6
UBE2D3-208ENST00000394803 TROAPQ12815 778 aa11.3□□□□□ -0.6
UBE2D3-208ENST00000394803 PFKFB3Q16875 520 aaPredicted RBP11.3□□□□□ -0.6
UBE2D3-208ENST00000394803 NEK11Q8NG66 645 aa11.3□□□□□ -0.6
UBE2D3-208ENST00000394803 ZNF652Q9Y2D9 606 aa11.3□□□□□ -0.6
UBE2D3-208ENST00000394803 XDHP47989 1333 aa11.3□□□□□ -0.6
UBE2D3-208ENST00000394803 CNTNAP5Q8WYK1 1306 aa11.3□□□□□ -0.6
UBE2D3-208ENST00000394803 BICDL2A1A5D9 508 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 NDUFA10O95299 355 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 DNM2P50570 870 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 CHRNDQ07001 517 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 CCDC170Q8IYT3 715 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 DNAJC7Q99615 494 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 CRNKL1Q9BZJ0 848 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 TSGA10Q9BZW7 698 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 EPC1Q9H2F5 836 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 SEC31BQ9NQW1 1179 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 VPS18Q9P253 973 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 ARPP21Q9UBL0 812 aaPredicted RBP11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 ABCF2Q9UG63 623 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 MYH8P13535 1937 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 LAMB1P07942 1786 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 ANO9A1A5B4 782 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 LGALS16A8MUM7 142 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 EIF5P55010 431 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 ERVK-24P63145 666 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 IRX5P78411 483 aaPredicted RBP11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 ST5P78524 1137 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 MCM6Q14566 821 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 SUSD4Q5VX71 490 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 ACRBPQ8NEB7 543 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 RIOK1Q9BRS2 568 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 IRX2Q9BZI1 471 aaPredicted RBP11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 VPS16Q9H269 839 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 ZSWIM4Q9H7M6 989 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 PDE11AQ9HCR9 933 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 CCDC87Q9NVE4 849 aa11.29□□□□□ -0.6
UBE2D3-208ENST00000394803 PLEKHA8P1O95397 391 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms