RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 OGFOD1Q8N543 542 aa25.45■■□□□ 1.66
HMGA2-203ENST00000393578 CCDC148Q8NFR7 591 aa25.45■■□□□ 1.66
HMGA2-203ENST00000393578 GPKOWQ92917 476 aaPredicted RBP eCLIP25.45■■□□□ 1.66
HMGA2-203ENST00000393578 BARHL2Q9NY43 387 aa25.45■■□□□ 1.66
HMGA2-203ENST00000393578 BRCA1P38398 1863 aaKnown RBP25.45■■□□□ 1.66
HMGA2-203ENST00000393578 SPDYE2BA6NHP3 402 aa25.44■■□□□ 1.66
HMGA2-203ENST00000393578 MPHOSPH10O00566 681 aaKnown RBP25.44■■□□□ 1.66
HMGA2-203ENST00000393578 BMP15O95972 392 aa25.44■■□□□ 1.66
HMGA2-203ENST00000393578 SPDYE6P0CI01 402 aa25.44■■□□□ 1.66
HMGA2-203ENST00000393578 FAM200AQ8TCP9 573 aa25.44■■□□□ 1.66
HMGA2-203ENST00000393578 CLIC6Q96NY7 704 aa25.44■■□□□ 1.66
HMGA2-203ENST00000393578 TRIM34Q9BYJ4 488 aa25.44■■□□□ 1.66
HMGA2-203ENST00000393578 FBXO2Q9UK22 296 aaPredicted RBP25.44■■□□□ 1.66
HMGA2-203ENST00000393578 PCDHA4Q9UN74 947 aa25.44■■□□□ 1.66
HMGA2-203ENST00000393578 CAVIN2O95810 425 aa25.44■■□□□ 1.66
HMGA2-203ENST00000393578 ATP2B1P20020 1258 aa25.44■■□□□ 1.66
HMGA2-203ENST00000393578 TRAPPC10P48553 1259 aa25.44■■□□□ 1.66
HMGA2-203ENST00000393578 WWC2Q6AWC2 1192 aa25.44■■□□□ 1.66
HMGA2-203ENST00000393578 TATDN1Q6P1N9 297 aa25.44■■□□□ 1.66
HMGA2-203ENST00000393578 BLIDQ8IZY5 108 aa25.44■■□□□ 1.66
HMGA2-203ENST00000393578 LRRC47Q8N1G4 583 aaKnown RBP25.44■■□□□ 1.66
HMGA2-203ENST00000393578 TIGD1Q96MW7 591 aa25.44■■□□□ 1.66
HMGA2-203ENST00000393578 SYKP43405 635 aa25.43■■□□□ 1.66
HMGA2-203ENST00000393578 EIF6P56537 245 aaKnown RBP25.43■■□□□ 1.66
HMGA2-203ENST00000393578 CERKLQ49MI3 558 aaPredicted RBP25.43■■□□□ 1.66
HMGA2-203ENST00000393578 HEATR3Q7Z4Q2 680 aa25.43■■□□□ 1.66
HMGA2-203ENST00000393578 ZNF579Q8NAF0 562 aaKnown RBP25.43■■□□□ 1.66
HMGA2-203ENST00000393578 RRP36Q96EU6 259 aaKnown RBP25.43■■□□□ 1.66
HMGA2-203ENST00000393578 TMOD2Q9NZR1 351 aa25.43■■□□□ 1.66
HMGA2-203ENST00000393578 SRPRBQ9Y5M8 271 aaKnown RBP25.43■■□□□ 1.66
HMGA2-203ENST00000393578 STXBP3O00186 592 aa25.42■■□□□ 1.66
HMGA2-203ENST00000393578 ANO6Q4KMQ2 910 aa25.42■■□□□ 1.66
HMGA2-203ENST00000393578 CLEC10AQ8IUN9 316 aa25.42■■□□□ 1.66
HMGA2-203ENST00000393578 DAGLBQ8NCG7 672 aa25.42■■□□□ 1.66
HMGA2-203ENST00000393578 AGBL3Q8NEM8 1001 aa25.42■■□□□ 1.66
HMGA2-203ENST00000393578 DLGAP5Q15398 846 aa25.42■■□□□ 1.66
HMGA2-203ENST00000393578 TYW1BQ6NUM6 668 aa25.42■■□□□ 1.66
HMGA2-203ENST00000393578 RIOX1Q9H6W3 641 aa25.42■■□□□ 1.66
HMGA2-203ENST00000393578 CCDC12Q8WUD4 166 aaPredicted RBP25.41■■□□□ 1.66
HMGA2-203ENST00000393578 TAOK3Q9H2K8 898 aa25.41■■□□□ 1.66
HMGA2-203ENST00000393578 CPVLQ9H3G5 476 aa25.41■■□□□ 1.66
HMGA2-203ENST00000393578 SEC63Q9UGP8 760 aaKnown RBP25.41■■□□□ 1.66
HMGA2-203ENST00000393578 SLURP2P0DP57 97 aa25.4■■□□□ 1.66
HMGA2-203ENST00000393578 R3HDM1Q15032 1099 aaKnown RBP25.4■■□□□ 1.66
HMGA2-203ENST00000393578 NOM1Q5C9Z4 860 aaKnown RBP25.4■■□□□ 1.66
HMGA2-203ENST00000393578 TTC38Q5R3I4 469 aa25.4■■□□□ 1.66
HMGA2-203ENST00000393578 PIK3AP1Q6ZUJ8 805 aa25.4■■□□□ 1.66
HMGA2-203ENST00000393578 TRIM44Q96DX7 344 aaPredicted RBP25.4■■□□□ 1.66
HMGA2-203ENST00000393578 ZBTB12Q9Y330 459 aaPredicted RBP25.4■■□□□ 1.66
HMGA2-203ENST00000393578 FAM196BA6NMK8 535 aa25.4■■□□□ 1.66
HMGA2-203ENST00000393578 KANSL2Q9H9L4 492 aa25.4■■□□□ 1.66
HMGA2-203ENST00000393578 CD2APQ9Y5K6 639 aa25.4■■□□□ 1.66
HMGA2-203ENST00000393578 FER1L6Q2WGJ9 1857 aa25.39■■□□□ 1.66
HMGA2-203ENST00000393578 M0R2N6 131 aa25.39■■□□□ 1.66
HMGA2-203ENST00000393578 STX1AQ16623 288 aa25.39■■□□□ 1.66
HMGA2-203ENST00000393578 KCNH3Q9ULD8 1083 aa25.39■■□□□ 1.66
HMGA2-203ENST00000393578 ZNF543Q08ER8 600 aa25.38■■□□□ 1.65
HMGA2-203ENST00000393578 MTMR14Q8NCE2 650 aa25.38■■□□□ 1.65
HMGA2-203ENST00000393578 MKL1Q969V6 931 aa25.38■■□□□ 1.65
HMGA2-203ENST00000393578 ZMYND12Q9H0C1 365 aa25.38■■□□□ 1.65
HMGA2-203ENST00000393578 FAM13BQ9NYF5 915 aa25.38■■□□□ 1.65
HMGA2-203ENST00000393578 NYAP2Q9P242 653 aa25.38■■□□□ 1.65
HMGA2-203ENST00000393578 KIAA1468Q9P260 1216 aa25.38■■□□□ 1.65
HMGA2-203ENST00000393578 PPP1R1BQ9UD71 204 aaPredicted RBP25.38■■□□□ 1.65
HMGA2-203ENST00000393578 FRMPD2Q68DX3 1309 aaPredicted RBP25.38■■□□□ 1.65
HMGA2-203ENST00000393578 hCG_1984214I3L0E3 225 aa25.38■■□□□ 1.65
HMGA2-203ENST00000393578 ADAMTS3O15072 1205 aa25.38■■□□□ 1.65
HMGA2-203ENST00000393578 CXCL9Q07325 125 aa25.38■■□□□ 1.65
HMGA2-203ENST00000393578 GPATCH4Q5T3I0 446 aaKnown RBP25.38■■□□□ 1.65
HMGA2-203ENST00000393578 TMEM179Q6ZVK1 233 aa25.38■■□□□ 1.65
HMGA2-203ENST00000393578 HOMER1Q86YM7 354 aa25.38■■□□□ 1.65
HMGA2-203ENST00000393578 ZNF713Q8N859 430 aaPredicted RBP25.38■■□□□ 1.65
HMGA2-203ENST00000393578 FERMT2Q96AC1 680 aa25.38■■□□□ 1.65
HMGA2-203ENST00000393578 CSRNP1Q96S65 589 aa25.38■■□□□ 1.65
HMGA2-203ENST00000393578 SGIP1Q9BQI5 828 aa25.38■■□□□ 1.65
HMGA2-203ENST00000393578 UBA5Q9GZZ9 404 aa25.38■■□□□ 1.65
HMGA2-203ENST00000393578 ZNF70Q9UC06 446 aaPredicted RBP25.38■■□□□ 1.65
HMGA2-203ENST00000393578 MYH4Q9Y623 1939 aa25.37■■□□□ 1.65
HMGA2-203ENST00000393578 ATP2B2Q01814 1243 aa25.37■■□□□ 1.65
HMGA2-203ENST00000393578 JDP2Q8WYK2 163 aa25.37■■□□□ 1.65
HMGA2-203ENST00000393578 PIGSQ96S52 555 aa25.37■■□□□ 1.65
HMGA2-203ENST00000393578 CBX8Q9HC52 389 aa25.37■■□□□ 1.65
HMGA2-203ENST00000393578 VAT1LQ9HCJ6 419 aa25.37■■□□□ 1.65
HMGA2-203ENST00000393578 WNT7AO00755 349 aa25.36■■□□□ 1.65
HMGA2-203ENST00000393578 ZNF165P49910 485 aa25.36■■□□□ 1.65
HMGA2-203ENST00000393578 NAPAP54920 295 aa25.36■■□□□ 1.65
HMGA2-203ENST00000393578 GRIN1Q05586 938 aa25.36■■□□□ 1.65
HMGA2-203ENST00000393578 ZNF174Q15697 407 aa25.36■■□□□ 1.65
HMGA2-203ENST00000393578 SPDYE2Q495Y8 402 aa25.36■■□□□ 1.65
HMGA2-203ENST00000393578 FKBP1CQ5VVH2 108 aa25.36■■□□□ 1.65
HMGA2-203ENST00000393578 DNAJC25Q9H1X3 360 aa25.36■■□□□ 1.65
HMGA2-203ENST00000393578 ANO10Q9NW15 660 aa25.36■■□□□ 1.65
HMGA2-203ENST00000393578 HERC5Q9UII4 1024 aaKnown RBP25.36■■□□□ 1.65
HMGA2-203ENST00000393578 FAM151AQ8WW52 585 aa25.36■■□□□ 1.65
HMGA2-203ENST00000393578 USP25Q9UHP3 1055 aa25.36■■□□□ 1.65
HMGA2-203ENST00000393578 PCDHA6Q9UN73 950 aa25.36■■□□□ 1.65
HMGA2-203ENST00000393578 PCDHA8Q9Y5H6 950 aa25.36■■□□□ 1.65
HMGA2-203ENST00000393578 CCDC194A0A1B0GVG4 234 aa25.35■■□□□ 1.65
HMGA2-203ENST00000393578 CLRN2A0PK11 232 aa25.35■■□□□ 1.65
HMGA2-203ENST00000393578 TCP10L2B9ZVM9 353 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms