RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 ADAMTS3O15072 1205 aa16.34■□□□□ 0.21
SFXN3-202ENST00000393459 MMP1P03956 469 aa16.34■□□□□ 0.21
SFXN3-202ENST00000393459 INPP5BP32019 993 aa16.34■□□□□ 0.21
SFXN3-202ENST00000393459 GUCY1A3Q02108 690 aa16.34■□□□□ 0.21
SFXN3-202ENST00000393459 RABL6Q3YEC7 729 aaPredicted RBP16.34■□□□□ 0.21
SFXN3-202ENST00000393459 TMC4Q7Z404 712 aa16.34■□□□□ 0.21
SFXN3-202ENST00000393459 PANX2Q96RD6 677 aa16.34■□□□□ 0.21
SFXN3-202ENST00000393459 UBAC1Q9BSL1 405 aa16.34■□□□□ 0.21
SFXN3-202ENST00000393459 GBP3Q9H0R5 595 aa16.34■□□□□ 0.21
SFXN3-202ENST00000393459 MLXIPQ9HAP2 919 aa16.34■□□□□ 0.21
SFXN3-202ENST00000393459 B4DLN1 442 aa16.34■□□□□ 0.21
SFXN3-202ENST00000393459 KCNJ18B7U540 433 aa16.34■□□□□ 0.21
SFXN3-202ENST00000393459 BUB1O43683 1085 aa16.34■□□□□ 0.21
SFXN3-202ENST00000393459 KCNJ12Q14500 433 aa16.34■□□□□ 0.21
SFXN3-202ENST00000393459 MYCBPQ99417 103 aaPredicted RBP16.34■□□□□ 0.21
SFXN3-202ENST00000393459 BCCIPQ9P287 314 aaKnown RBP eCLIP16.34■□□□□ 0.21
SFXN3-202ENST00000393459 SIPA1L3O60292 1781 aaPredicted RBP16.34■□□□□ 0.21
SFXN3-202ENST00000393459 HNRNPH1P31943 449 aaKnown RBP16.33■□□□□ 0.21
SFXN3-202ENST00000393459 COPB1P53618 953 aaKnown RBP16.33■□□□□ 0.21
SFXN3-202ENST00000393459 PMS1P54277 932 aaKnown RBP16.33■□□□□ 0.21
SFXN3-202ENST00000393459 EVX2Q03828 476 aa16.33■□□□□ 0.21
SFXN3-202ENST00000393459 CYP26C1Q6V0L0 522 aa16.33■□□□□ 0.21
SFXN3-202ENST00000393459 IGDCC4Q8TDY8 1250 aa16.33■□□□□ 0.21
SFXN3-202ENST00000393459 COG1Q8WTW3 980 aa16.33■□□□□ 0.21
SFXN3-202ENST00000393459 CAPS2Q9BXY5 557 aa16.33■□□□□ 0.21
SFXN3-202ENST00000393459 TTF2Q9UNY4 1162 aaKnown RBP16.33■□□□□ 0.21
SFXN3-202ENST00000393459 JAG2Q9Y219 1238 aa16.33■□□□□ 0.21
SFXN3-202ENST00000393459 MEGF6O75095 1541 aa16.33■□□□□ 0.2
SFXN3-202ENST00000393459 WTAPQ15007 396 aa16.33■□□□□ 0.2
SFXN3-202ENST00000393459 PIK3AP1Q6ZUJ8 805 aa16.33■□□□□ 0.2
SFXN3-202ENST00000393459 DNAAF5Q86Y56 855 aa16.33■□□□□ 0.2
SFXN3-202ENST00000393459 MS4A14Q96JA4 679 aa16.33■□□□□ 0.2
SFXN3-202ENST00000393459 MKRN1Q9UHC7 482 aaKnown RBP16.33■□□□□ 0.2
SFXN3-202ENST00000393459 CDHR2Q9BYE9 1310 aa16.33■□□□□ 0.2
SFXN3-202ENST00000393459 TRIM75PA6NK02 468 aa16.32■□□□□ 0.2
SFXN3-202ENST00000393459 USP14P54578 494 aa16.32■□□□□ 0.2
SFXN3-202ENST00000393459 IFIT5Q13325 482 aaKnown RBP16.32■□□□□ 0.2
SFXN3-202ENST00000393459 CT47A1Q5JQC4 288 aaPredicted RBP16.32■□□□□ 0.2
SFXN3-202ENST00000393459 PRDM11Q9NQV5 511 aa16.32■□□□□ 0.2
SFXN3-202ENST00000393459 ERICH2A1L162 156 aa16.32■□□□□ 0.2
SFXN3-202ENST00000393459 AGPSO00116 658 aa16.32■□□□□ 0.2
SFXN3-202ENST00000393459 PLEKHA8P1O95397 391 aa16.32■□□□□ 0.2
SFXN3-202ENST00000393459 ARID5AQ03989 594 aa16.32■□□□□ 0.2
SFXN3-202ENST00000393459 PTGDRQ13258 359 aa16.32■□□□□ 0.2
SFXN3-202ENST00000393459 NFRKBQ6P4R8 1299 aa16.32■□□□□ 0.2
SFXN3-202ENST00000393459 MFSD6Q6ZSS7 791 aa16.32■□□□□ 0.2
SFXN3-202ENST00000393459 LUC7L2Q9Y383 392 aaKnown RBP16.32■□□□□ 0.2
SFXN3-202ENST00000393459 SHTN1A0MZ66 631 aa16.32■□□□□ 0.2
SFXN3-202ENST00000393459 POTEB2H3BUK9 544 aa16.32■□□□□ 0.2
SFXN3-202ENST00000393459 CYP27B1O15528 508 aa16.32■□□□□ 0.2
SFXN3-202ENST00000393459 MAP2K2P36507 400 aa16.32■□□□□ 0.2
SFXN3-202ENST00000393459 ANKRD20A12PQ8NF67 263 aa16.32■□□□□ 0.2
SFXN3-202ENST00000393459 PLBD2Q8NHP8 589 aa16.32■□□□□ 0.2
SFXN3-202ENST00000393459 HNRNPLLQ8WVV9 542 aaKnown RBP16.32■□□□□ 0.2
SFXN3-202ENST00000393459 DCAF5Q96JK2 942 aa16.32■□□□□ 0.2
SFXN3-202ENST00000393459 TRIM47Q96LD4 638 aa16.32■□□□□ 0.2
SFXN3-202ENST00000393459 GREM2Q9H772 168 aa16.32■□□□□ 0.2
SFXN3-202ENST00000393459 EIF4E1BA6NMX2 242 aaKnown RBP16.31■□□□□ 0.2
SFXN3-202ENST00000393459 PPP1R3GB7ZBB8 358 aa16.31■□□□□ 0.2
SFXN3-202ENST00000393459 IPO7O95373 1038 aaKnown RBP16.31■□□□□ 0.2
SFXN3-202ENST00000393459 USP5P45974 858 aa16.31■□□□□ 0.2
SFXN3-202ENST00000393459 CASP7P55210 303 aa16.31■□□□□ 0.2
SFXN3-202ENST00000393459 E2F5Q15329 346 aa16.31■□□□□ 0.2
SFXN3-202ENST00000393459 TTF1Q15361 905 aaPredicted RBP16.31■□□□□ 0.2
SFXN3-202ENST00000393459 TRADDQ15628 312 aa16.31■□□□□ 0.2
SFXN3-202ENST00000393459 WHAMMP3Q1A5X7 153 aa16.31■□□□□ 0.2
SFXN3-202ENST00000393459 TYW1BQ6NUM6 668 aa16.31■□□□□ 0.2
SFXN3-202ENST00000393459 MMS22LQ6ZRQ5 1243 aa16.31■□□□□ 0.2
SFXN3-202ENST00000393459 NCAPGQ9BPX3 1015 aa16.31■□□□□ 0.2
SFXN3-202ENST00000393459 PPANQ9NQ55 473 aaKnown RBP16.31■□□□□ 0.2
SFXN3-202ENST00000393459 LRWD1Q9UFC0 647 aa16.31■□□□□ 0.2
SFXN3-202ENST00000393459 PACSIN2Q9UNF0 486 aaPredicted RBP16.31■□□□□ 0.2
SFXN3-202ENST00000393459 LAMA4Q16363 1823 aa16.31■□□□□ 0.2
SFXN3-202ENST00000393459 MOCS3O95396 460 aa16.31■□□□□ 0.2
SFXN3-202ENST00000393459 TMTC1Q8IUR5 882 aa16.31■□□□□ 0.2
SFXN3-202ENST00000393459 TSEN2Q8NCE0 465 aaKnown RBP16.31■□□□□ 0.2
SFXN3-202ENST00000393459 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.31■□□□□ 0.2
SFXN3-202ENST00000393459 FAM207AQ9NSI2 230 aaPredicted RBP16.31■□□□□ 0.2
SFXN3-202ENST00000393459 KDM6AO15550 1401 aaPredicted RBP16.3■□□□□ 0.2
SFXN3-202ENST00000393459 PRPF6O94906 941 aaKnown RBP16.3■□□□□ 0.2
SFXN3-202ENST00000393459 PDE6AP16499 860 aa16.3■□□□□ 0.2
SFXN3-202ENST00000393459 CCDC181Q5TID7 509 aa16.3■□□□□ 0.2
SFXN3-202ENST00000393459 EFCAB13Q8IY85 973 aa16.3■□□□□ 0.2
SFXN3-202ENST00000393459 KANSL2Q9H9L4 492 aa16.3■□□□□ 0.2
SFXN3-202ENST00000393459 EPB41L4AQ9HCS5 686 aaPredicted RBP16.3■□□□□ 0.2
SFXN3-202ENST00000393459 NMT2O60551 498 aa16.3■□□□□ 0.2
SFXN3-202ENST00000393459 PRCPP42785 496 aa16.3■□□□□ 0.2
SFXN3-202ENST00000393459 HERVK_113P62684 666 aa16.3■□□□□ 0.2
SFXN3-202ENST00000393459 KCNV1Q6PIU1 500 aa16.3■□□□□ 0.2
SFXN3-202ENST00000393459 SHISA4Q96DD7 197 aa16.3■□□□□ 0.2
SFXN3-202ENST00000393459 MED4Q9NPJ6 270 aa16.3■□□□□ 0.2
SFXN3-202ENST00000393459 SARSP49591 514 aaKnown RBP16.3■□□□□ 0.2
SFXN3-202ENST00000393459 RILPL1Q5EBL4 403 aa16.3■□□□□ 0.2
SFXN3-202ENST00000393459 OTUD6BQ8N6M0 293 aa16.3■□□□□ 0.2
SFXN3-202ENST00000393459 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.3■□□□□ 0.2
SFXN3-202ENST00000393459 STRN4Q9NRL3 753 aa16.3■□□□□ 0.2
SFXN3-202ENST00000393459 WDR17Q8IZU2 1322 aa16.29■□□□□ 0.2
SFXN3-202ENST00000393459 SCN11AQ9UI33 1791 aa16.29■□□□□ 0.2
SFXN3-202ENST00000393459 A0A087WUV0 522 aaPredicted RBP16.29■□□□□ 0.2
SFXN3-202ENST00000393459 HGSO14964 777 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms