RNA–Protein interactions for RNA: ENST00000393164.6

ATP2B1-203, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2B1, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-203ENST00000393164 PLA2G6O60733 806 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 NDUFB10O96000 172 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 PDHBP11177 359 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 OSBPP22059 807 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 CCT2P78371 535 aaKnown RBP4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 IRX3P78415 501 aaPredicted RBP4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 ZNF543Q08ER8 600 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 SREBF2Q12772 1141 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 ME3Q16798 604 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 SH3D19Q5HYK7 790 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 RGMBQ6NW40 437 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 FAM177A1Q8N128 213 aaPredicted RBP4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 ZNF713Q8N859 430 aaPredicted RBP4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 IPO9Q96P70 1041 aaKnown RBP4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 TANGO6Q9C0B7 1094 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 BRPF3Q9ULD4 1205 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 AFG3L2Q9Y4W6 797 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 TLL2Q9Y6L7 1015 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 SSC5DA1L4H1 1573 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 MYPNQ86TC9 1320 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 NID2Q14112 1375 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 MYH8P13535 1937 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 USP17L15C9J2P7 530 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 USP17L13C9JLJ4 530 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 USP17L11C9JVI0 530 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 KLRF2D3W0D1 207 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 USP17L18D6R9N7 530 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 USP17L22D6RA61 530 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 USP17L17D6RBQ6 530 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 USP17L19D6RCP7 530 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 USP17L20D6RJB6 530 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 SNHG28P0DPA3 235 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 IFNAR1P17181 557 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 GUCY1A2P33402 732 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 APLP1P51693 650 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 HMGCS2P54868 508 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 USP17L24Q0WX57 530 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 RRP1BQ14684 758 aaKnown RBP4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 ZYXQ15942 572 aaKnown RBP4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 TMTC3Q6ZXV5 915 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 SAPCD2Q86UD0 394 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 CCDC83Q8IWF9 413 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 PRPF38AQ8NAV1 312 aaKnown RBP4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 WNK4Q96J92 1243 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 SPZ1Q9BXG8 430 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 RNF26Q9BY78 433 aaPredicted RBP4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 GLT8D2Q9H1C3 349 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 BRMS1Q9HCU9 246 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 CREBZFQ9NS37 354 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 HOXC10Q9NYD6 342 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 KCNH4Q9UQ05 1017 aa4.1□□□□□ -1.75
ATP2B1-203ENST00000393164 STK36Q9NRP7 1315 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 A0A0G2JLL6 359 aaPredicted RBP4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 PALM3A6NDB9 673 aaPredicted RBP4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 TMEM232C9JQI7 657 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 IRF6O14896 467 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 ZBED4O75132 1171 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 FLOT1O75955 427 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 DEXIO95424 95 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 SLURP2P0DP57 97 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 VCAM1P19320 739 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 SCRN1Q12765 414 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 NOGQ13253 232 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 CUL4AQ13619 759 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 SAFBQ15424 915 aaKnown RBP eCLIP4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 SPRYD7Q5W111 196 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 CST9Q5W186 159 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 GADL1Q6ZQY3 521 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 PRRT2Q7Z6L0 340 aaPredicted RBP4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 CLEC10AQ8IUN9 316 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 TEX2Q8IWB9 1127 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 CCDC144CPQ8IYA2 1237 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 SPICE1Q8N0Z3 855 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 MB21D1Q8N884 522 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 RGS22Q8NE09 1264 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 CCDC148Q8NFR7 591 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 ACER1Q8TDN7 264 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 CLMNQ96JQ2 1002 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 SLF1Q9BQI6 1058 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 MYL10Q9BUA6 226 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 ZCCHC17Q9NP64 241 aaKnown RBP4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 GPCPD1Q9NPB8 672 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 GPHNQ9NQX3 736 aaPredicted RBP4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 SLC45A1Q9Y2W3 748 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 POLR2AP24928 1970 aaKnown RBP4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 CCL15-CCL14A0A0B4J2E2 113 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 A0A1W2PRG0 241 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 PTPDC1A2A3K4 754 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 H3BQV1 296 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 PRPF3O43395 683 aaKnown RBP4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 ALDH1A1P00352 501 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 RXRAP19793 462 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 COPB2P35606 906 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 GNL2Q13823 731 aaKnown RBP4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 COG2Q14746 738 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 CCL15Q16663 113 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 FAM83BQ5T0W9 1011 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 SYDE2Q5VT97 1194 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 DLK2Q6UY11 383 aa4.09□□□□□ -1.75
ATP2B1-203ENST00000393164 MOB2Q70IA6 237 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms