RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 NAP1L4Q99733 375 aaKnown RBP18.53■□□□□ 0.56
SNX9-201ENST00000392185 ERLIN1O75477 346 aa18.52■□□□□ 0.56
SNX9-201ENST00000392185 MMP1P03956 469 aa18.52■□□□□ 0.56
SNX9-201ENST00000392185 CDC27P30260 824 aa18.52■□□□□ 0.56
SNX9-201ENST00000392185 UBXN2AP68543 259 aa18.52■□□□□ 0.56
SNX9-201ENST00000392185 PAK1Q13153 545 aa18.52■□□□□ 0.56
SNX9-201ENST00000392185 SYMPKQ92797 1274 aaKnown RBP18.52■□□□□ 0.56
SNX9-201ENST00000392185 PI4KBQ9UBF8 816 aa18.52■□□□□ 0.56
SNX9-201ENST00000392185 PXDNLA1KZ92 1463 aa18.52■□□□□ 0.56
SNX9-201ENST00000392185 KRBA2Q6ZNG9 492 aa18.52■□□□□ 0.56
SNX9-201ENST00000392185 PCDHB6Q9Y5E3 794 aa18.52■□□□□ 0.56
SNX9-201ENST00000392185 COL5A2P05997 1499 aaPredicted RBP18.52■□□□□ 0.56
SNX9-201ENST00000392185 FLOT1O75955 427 aa18.52■□□□□ 0.56
SNX9-201ENST00000392185 POTEJP0CG39 1038 aa18.52■□□□□ 0.56
SNX9-201ENST00000392185 CYLC1P35663 651 aaPredicted RBP18.52■□□□□ 0.56
SNX9-201ENST00000392185 PRPF4BQ13523 1007 aaKnown RBP18.52■□□□□ 0.56
SNX9-201ENST00000392185 CTR9Q6PD62 1173 aa18.52■□□□□ 0.56
SNX9-201ENST00000392185 FAM212AQ96EL1 285 aa18.52■□□□□ 0.56
SNX9-201ENST00000392185 FOXP1Q9H334 677 aaPredicted RBP18.52■□□□□ 0.56
SNX9-201ENST00000392185 KANSL2Q9H9L4 492 aa18.52■□□□□ 0.56
SNX9-201ENST00000392185 OR52Z1P0C646 297 aa18.52■□□□□ 0.55
SNX9-201ENST00000392185 PAFAH1B1P43034 410 aa18.52■□□□□ 0.55
SNX9-201ENST00000392185 CRKP46108 304 aa18.52■□□□□ 0.55
SNX9-201ENST00000392185 GRAMD1CQ8IYS0 662 aa18.52■□□□□ 0.55
SNX9-201ENST00000392185 CCDC42Q96M95 316 aa18.52■□□□□ 0.55
SNX9-201ENST00000392185 NOC4LQ9BVI4 516 aaKnown RBP18.52■□□□□ 0.55
SNX9-201ENST00000392185 XPO4Q9C0E2 1151 aaKnown RBP18.52■□□□□ 0.55
SNX9-201ENST00000392185 ZNF277Q9NRM2 450 aaPredicted RBP18.52■□□□□ 0.55
SNX9-201ENST00000392185 HARSP12081 509 aaKnown RBP18.51■□□□□ 0.55
SNX9-201ENST00000392185 KLRK1P26718 216 aa18.51■□□□□ 0.55
SNX9-201ENST00000392185 TPH2Q8IWU9 490 aa18.51■□□□□ 0.55
SNX9-201ENST00000392185 NSUN4Q96CB9 384 aaKnown RBP18.51■□□□□ 0.55
SNX9-201ENST00000392185 PAGR1Q9BTK6 254 aa18.51■□□□□ 0.55
SNX9-201ENST00000392185 COBLO75128 1261 aa18.51■□□□□ 0.55
SNX9-201ENST00000392185 CYP4A11Q02928 519 aa18.51■□□□□ 0.55
SNX9-201ENST00000392185 POLR3EQ9NVU0 708 aa18.51■□□□□ 0.55
SNX9-201ENST00000392185 DNM3Q9UQ16 869 aa18.51■□□□□ 0.55
SNX9-201ENST00000392185 ARHGEF35A5YM69 484 aa18.51■□□□□ 0.55
SNX9-201ENST00000392185 DALRD3Q5D0E6 543 aaKnown RBP18.51■□□□□ 0.55
SNX9-201ENST00000392185 GPATCH4Q5T3I0 446 aaKnown RBP18.51■□□□□ 0.55
SNX9-201ENST00000392185 PODNQ7Z5L7 613 aa18.51■□□□□ 0.55
SNX9-201ENST00000392185 TBC1D16Q8TBP0 767 aa18.51■□□□□ 0.55
SNX9-201ENST00000392185 CCDC169A6NNP5 214 aa18.5■□□□□ 0.55
SNX9-201ENST00000392185 CNNM4Q6P4Q7 775 aa18.5■□□□□ 0.55
SNX9-201ENST00000392185 RRAGDQ9NQL2 400 aaPredicted RBP18.5■□□□□ 0.55
SNX9-201ENST00000392185 SORBS3O60504 671 aa18.5■□□□□ 0.55
SNX9-201ENST00000392185 PHACTR2O75167 634 aa18.5■□□□□ 0.55
SNX9-201ENST00000392185 SNAP25P60880 206 aa18.5■□□□□ 0.55
SNX9-201ENST00000392185 NEK11Q8NG66 645 aa18.5■□□□□ 0.55
SNX9-201ENST00000392185 LY9Q9HBG7 655 aa18.5■□□□□ 0.55
SNX9-201ENST00000392185 SWAP70Q9UH65 585 aa18.5■□□□□ 0.55
SNX9-201ENST00000392185 UBR1Q8IWV7 1749 aa18.5■□□□□ 0.55
SNX9-201ENST00000392185 GOLGA6L9A6NEM1 432 aa18.5■□□□□ 0.55
SNX9-201ENST00000392185 ECE2O60344 883 aa18.5■□□□□ 0.55
SNX9-201ENST00000392185 SLC4A9Q96Q91 983 aa18.5■□□□□ 0.55
SNX9-201ENST00000392185 TMEM47Q9BQJ4 181 aa18.5■□□□□ 0.55
SNX9-201ENST00000392185 DGKHQ86XP1 1220 aa18.49■□□□□ 0.55
SNX9-201ENST00000392185 MYO6Q9UM54 1294 aa18.49■□□□□ 0.55
SNX9-201ENST00000392185 GUCA1BQ9UMX6 200 aa18.49■□□□□ 0.55
SNX9-201ENST00000392185 GH2P01242 217 aa18.49■□□□□ 0.55
SNX9-201ENST00000392185 CCDC175P0C221 793 aa18.49■□□□□ 0.55
SNX9-201ENST00000392185 TAF3Q5VWG9 929 aa18.49■□□□□ 0.55
SNX9-201ENST00000392185 AMNQ9BXJ7 453 aa18.49■□□□□ 0.55
SNX9-201ENST00000392185 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.49■□□□□ 0.552e-6■■■■■ 73.6
SNX9-201ENST00000392185 TESPA1A2RU30 521 aaPredicted RBP18.49■□□□□ 0.55
SNX9-201ENST00000392185 GAS7O60861 476 aa18.49■□□□□ 0.55
SNX9-201ENST00000392185 IRX3P78415 501 aaPredicted RBP18.49■□□□□ 0.55
SNX9-201ENST00000392185 ASPRV1Q53RT3 343 aa18.49■□□□□ 0.55
SNX9-201ENST00000392185 CIAPIN1Q6FI81 312 aa18.49■□□□□ 0.55
SNX9-201ENST00000392185 IQCEQ6IPM2 695 aa18.49■□□□□ 0.55
SNX9-201ENST00000392185 TMCO3Q6UWJ1 677 aa18.49■□□□□ 0.55
SNX9-201ENST00000392185 NELFBQ8WX92 580 aa18.49■□□□□ 0.55
SNX9-201ENST00000392185 MXD3Q9BW11 206 aa18.49■□□□□ 0.55
SNX9-201ENST00000392185 CSADQ9Y600 493 aa18.49■□□□□ 0.55
SNX9-201ENST00000392185 A0A1W2PQ27 194 aa18.49■□□□□ 0.55
SNX9-201ENST00000392185 A0A1W2PQ64 194 aa18.49■□□□□ 0.55
SNX9-201ENST00000392185 A0A1W2PQD8 194 aa18.49■□□□□ 0.55
SNX9-201ENST00000392185 ALX1Q15699 326 aa18.49■□□□□ 0.55
SNX9-201ENST00000392185 TBCKQ8TEA7 893 aa18.49■□□□□ 0.55
SNX9-201ENST00000392185 BAG1Q99933 345 aaPredicted RBP18.49■□□□□ 0.55
SNX9-201ENST00000392185 HS1BP3Q53T59 392 aa18.48■□□□□ 0.55
SNX9-201ENST00000392185 CCDC102AQ96A19 550 aa18.48■□□□□ 0.55
SNX9-201ENST00000392185 HOOK2Q96ED9 719 aa18.48■□□□□ 0.55
SNX9-201ENST00000392185 DHX36Q9H2U1 1008 aaKnown RBP18.48■□□□□ 0.55
SNX9-201ENST00000392185 GINS2Q9Y248 185 aa18.48■□□□□ 0.55
SNX9-201ENST00000392185 B4DLN1 442 aa18.48■□□□□ 0.55
SNX9-201ENST00000392185 RAPGEF1Q13905 1077 aa18.48■□□□□ 0.55
SNX9-201ENST00000392185 DCAF15Q66K64 600 aa18.48■□□□□ 0.55
SNX9-201ENST00000392185 SYT10Q6XYQ8 523 aa18.48■□□□□ 0.55
SNX9-201ENST00000392185 ZBTB9Q96C00 473 aa18.48■□□□□ 0.55
SNX9-201ENST00000392185 FANCLQ9NW38 375 aa18.48■□□□□ 0.55
SNX9-201ENST00000392185 PIM2Q9P1W9 311 aa18.48■□□□□ 0.55
SNX9-201ENST00000392185 MROH7-TTC4A0A0A0MT08 1334 aa18.48■□□□□ 0.55
SNX9-201ENST00000392185 AKR1B15C9JRZ8 316 aaPredicted RBP18.48■□□□□ 0.55
SNX9-201ENST00000392185 PRPF3O43395 683 aaKnown RBP18.48■□□□□ 0.55
SNX9-201ENST00000392185 DPCR1Q3MIW9 517 aa18.48■□□□□ 0.55
SNX9-201ENST00000392185 SULF1Q8IWU6 871 aa18.48■□□□□ 0.55
SNX9-201ENST00000392185 CEP95Q96GE4 821 aa18.48■□□□□ 0.55
SNX9-201ENST00000392185 SRRTQ9BXP5 876 aaKnown RBP18.48■□□□□ 0.55
SNX9-201ENST00000392185 PCDHA4Q9UN74 947 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms