RNA–Protein interactions for RNA: ENST00000390454.2

TRAV25-201, Transcript of T cell receptor alpha variable 25, humanhuman

APPRIS P1 BASIC

Gene TRAV25, Length 403 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25-201ENST00000390454 SLC5A4Q9NY91 659 aa7.5□□□□□ -1.21
TRAV25-201ENST00000390454 POLR3KQ9Y2Y1 108 aaPredicted RBP7.5□□□□□ -1.21
TRAV25-201ENST00000390454 ARHGAP31Q2M1Z3 1444 aa7.5□□□□□ -1.21
TRAV25-201ENST00000390454 TRAPPC8Q9Y2L5 1435 aa7.5□□□□□ -1.21
TRAV25-201ENST00000390454 ADGRB2O60241 1585 aa7.5□□□□□ -1.21
TRAV25-201ENST00000390454 ZFYVE16Q7Z3T8 1539 aa7.49□□□□□ -1.21
TRAV25-201ENST00000390454 LMTK2Q8IWU2 1503 aa7.49□□□□□ -1.21
TRAV25-201ENST00000390454 CCDC189A1A4V9 331 aa7.49□□□□□ -1.21
TRAV25-201ENST00000390454 AKAP10O43572 662 aa7.49□□□□□ -1.21
TRAV25-201ENST00000390454 NAT2P11245 290 aa7.49□□□□□ -1.21
TRAV25-201ENST00000390454 ARNTP27540 789 aa7.49□□□□□ -1.21
TRAV25-201ENST00000390454 L1CAMP32004 1257 aa7.49□□□□□ -1.21
TRAV25-201ENST00000390454 CTSOP43234 321 aaPredicted RBP7.49□□□□□ -1.21
TRAV25-201ENST00000390454 MTHFSP49914 203 aa7.49□□□□□ -1.21
TRAV25-201ENST00000390454 PIN1Q13526 163 aaPredicted RBP7.49□□□□□ -1.21
TRAV25-201ENST00000390454 RNF219Q5W0B1 726 aaPredicted RBP7.49□□□□□ -1.21
TRAV25-201ENST00000390454 KIAA1211LQ6NV74 962 aa7.49□□□□□ -1.21
TRAV25-201ENST00000390454 ZBTB46Q86UZ6 589 aa7.49□□□□□ -1.21
TRAV25-201ENST00000390454 ZSCAN30Q86W11 494 aa7.49□□□□□ -1.21
TRAV25-201ENST00000390454 SNIP1Q8TAD8 396 aaKnown RBP7.49□□□□□ -1.21
TRAV25-201ENST00000390454 TTC8Q8TAM2 541 aa7.49□□□□□ -1.21
TRAV25-201ENST00000390454 WDR66Q8TBY9 1149 aa7.49□□□□□ -1.21
TRAV25-201ENST00000390454 DDX54Q8TDD1 881 aaKnown RBP7.49□□□□□ -1.21
TRAV25-201ENST00000390454 LEO1Q8WVC0 666 aaPredicted RBP7.49□□□□□ -1.21
TRAV25-201ENST00000390454 SCYL1Q96KG9 808 aa7.49□□□□□ -1.21
TRAV25-201ENST00000390454 ZBTB40Q9NUA8 1239 aa7.49□□□□□ -1.21
TRAV25-201ENST00000390454 GNL3LQ9NVN8 582 aaKnown RBP7.49□□□□□ -1.21
TRAV25-201ENST00000390454 DACH1Q9UI36 760 aa7.49□□□□□ -1.21
TRAV25-201ENST00000390454 KIF1BO60333 1816 aa7.49□□□□□ -1.21
TRAV25-201ENST00000390454 EVC2Q86UK5 1308 aa7.49□□□□□ -1.21
TRAV25-201ENST00000390454 ANKRD36BQ8N2N9 1353 aa7.48□□□□□ -1.21
TRAV25-201ENST00000390454 FOSP01100 380 aaPredicted RBP7.48□□□□□ -1.21
TRAV25-201ENST00000390454 U2AF1L5P0DN76 240 aaPredicted RBP7.48□□□□□ -1.21
TRAV25-201ENST00000390454 TRIM27P14373 513 aa7.48□□□□□ -1.21
TRAV25-201ENST00000390454 NFKB1P19838 968 aa7.48□□□□□ -1.21
TRAV25-201ENST00000390454 MCM5P33992 734 aa7.48□□□□□ -1.21
TRAV25-201ENST00000390454 NUCB2P80303 420 aa7.48□□□□□ -1.21
TRAV25-201ENST00000390454 U2AF1Q01081 240 aaKnown RBP eCLIP7.48□□□□□ -1.21
TRAV25-201ENST00000390454 CALD1Q05682 793 aaKnown RBP7.48□□□□□ -1.21
TRAV25-201ENST00000390454 MLC1Q15049 377 aa7.48□□□□□ -1.21
TRAV25-201ENST00000390454 KLHL40Q2TBA0 621 aa7.48□□□□□ -1.21
TRAV25-201ENST00000390454 GFOD2Q3B7J2 385 aa7.48□□□□□ -1.21
TRAV25-201ENST00000390454 EFHC2Q5JST6 749 aa7.48□□□□□ -1.21
TRAV25-201ENST00000390454 COL13A1Q5TAT6 717 aaPredicted RBP7.48□□□□□ -1.21
TRAV25-201ENST00000390454 RASIP1Q5U651 963 aa7.48□□□□□ -1.21
TRAV25-201ENST00000390454 CHD1LQ86WJ1 897 aa7.48□□□□□ -1.21
TRAV25-201ENST00000390454 ITPRIPQ8IWB1 547 aa7.48□□□□□ -1.21
TRAV25-201ENST00000390454 ARHGAP45Q92619 1136 aa7.48□□□□□ -1.21
TRAV25-201ENST00000390454 TNPO1Q92973 898 aaKnown RBP7.48□□□□□ -1.21
TRAV25-201ENST00000390454 MRPL4Q9BYD3 311 aaKnown RBP7.48□□□□□ -1.21
TRAV25-201ENST00000390454 C14orf93Q9H972 538 aaKnown RBP7.48□□□□□ -1.21
TRAV25-201ENST00000390454 GPAMQ9HCL2 828 aa7.48□□□□□ -1.21
TRAV25-201ENST00000390454 IFT172Q9UG01 1749 aa7.48□□□□□ -1.21
TRAV25-201ENST00000390454 SFMBT1Q9UHJ3 866 aa7.48□□□□□ -1.21
TRAV25-201ENST00000390454 PNMA2Q9UL42 364 aa7.48□□□□□ -1.21
TRAV25-201ENST00000390454 MRPS23Q9Y3D9 190 aaKnown RBP7.48□□□□□ -1.21
TRAV25-201ENST00000390454 ADGRF5Q8IZF2 1346 aa7.48□□□□□ -1.21
TRAV25-201ENST00000390454 TRAV20A0A0B4J274 112 aa7.47□□□□□ -1.21
TRAV25-201ENST00000390454 OFD1O75665 1012 aa7.47□□□□□ -1.21
TRAV25-201ENST00000390454 RGS20O76081 388 aa7.47□□□□□ -1.21
TRAV25-201ENST00000390454 HOXD8P13378 290 aaPredicted RBP7.47□□□□□ -1.21
TRAV25-201ENST00000390454 MSNP26038 577 aaKnown RBP7.47□□□□□ -1.21
TRAV25-201ENST00000390454 SLC19A1P41440 591 aa7.47□□□□□ -1.21
TRAV25-201ENST00000390454 ZNF445P59923 1031 aa7.47□□□□□ -1.21
TRAV25-201ENST00000390454 SLC7A5Q01650 507 aa7.47□□□□□ -1.21
TRAV25-201ENST00000390454 STRN3Q13033 797 aa7.47□□□□□ -1.21
TRAV25-201ENST00000390454 INTS3Q68E01 1043 aaKnown RBP7.47□□□□□ -1.21
TRAV25-201ENST00000390454 UNC5AQ6ZN44 842 aa7.47□□□□□ -1.21
TRAV25-201ENST00000390454 TCEAL8Q8IYN2 117 aa7.47□□□□□ -1.21
TRAV25-201ENST00000390454 KISS1RQ969F8 398 aaPredicted RBP7.47□□□□□ -1.21
TRAV25-201ENST00000390454 GAL3ST3Q96A11 431 aa7.47□□□□□ -1.21
TRAV25-201ENST00000390454 CHMP4CQ96CF2 233 aa7.47□□□□□ -1.21
TRAV25-201ENST00000390454 NSUN5Q96P11 429 aaKnown RBP7.47□□□□□ -1.21
TRAV25-201ENST00000390454 HHIPQ96QV1 700 aa7.47□□□□□ -1.21
TRAV25-201ENST00000390454 CDH19Q9H159 772 aa7.47□□□□□ -1.21
TRAV25-201ENST00000390454 RUBCNLQ9H714 662 aa7.47□□□□□ -1.21
TRAV25-201ENST00000390454 PLA2G2EQ9NZK7 142 aa7.47□□□□□ -1.21
TRAV25-201ENST00000390454 GMIPQ9P107 970 aa7.47□□□□□ -1.21
TRAV25-201ENST00000390454 ZFATQ9P243 1243 aa7.47□□□□□ -1.21
TRAV25-201ENST00000390454 RRP7AQ9Y3A4 280 aaKnown RBP7.47□□□□□ -1.21
TRAV25-201ENST00000390454 NOS1P29475 1434 aa7.46□□□□□ -1.21
TRAV25-201ENST00000390454 TRBV23-1A0A0A0MS06 115 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 NFKBIEO00221 500 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 BRINP1O60477 761 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 HTR3BO95264 441 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 MAP3K6O95382 1288 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 EYA4O95677 639 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 ITGBL1O95965 494 aaPredicted RBP7.46□□□□□ -1.22
TRAV25-201ENST00000390454 CDC27P30260 824 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 TMPOP42166 694 aaKnown RBP7.46□□□□□ -1.22
TRAV25-201ENST00000390454 EXOSC9Q06265 439 aaKnown RBP7.46□□□□□ -1.22
TRAV25-201ENST00000390454 PCDH1Q08174 1060 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 MTMR1Q13613 665 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 RABEP1Q15276 862 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 SV2CQ496J9 727 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 IFFO2Q5TF58 517 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 NXNQ6DKJ4 435 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 FIGNL1Q6PIW4 674 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 SCUBE1Q8IWY4 988 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 LINC00528Q8N1L1 170 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms