RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 PCDHA1Q9Y5I3 950 aa16.45■□□□□ 0.22
LRRK1-201ENST00000388948 H0YCG3 227 aa16.45■□□□□ 0.22
LRRK1-201ENST00000388948 MIGA2Q7L4E1 593 aa16.45■□□□□ 0.22
LRRK1-201ENST00000388948 TRIM50Q86XT4 487 aa16.45■□□□□ 0.22
LRRK1-201ENST00000388948 VPS52Q8N1B4 723 aa16.45■□□□□ 0.22
LRRK1-201ENST00000388948 OTUD7AQ8TE49 926 aaPredicted RBP16.45■□□□□ 0.22
LRRK1-201ENST00000388948 DDX25Q9UHL0 483 aaKnown RBP16.45■□□□□ 0.22
LRRK1-201ENST00000388948 C21orf2O43822 256 aa16.45■□□□□ 0.22
LRRK1-201ENST00000388948 TFDP1Q14186 410 aa16.45■□□□□ 0.22
LRRK1-201ENST00000388948 GPIHBP1Q8IV16 184 aa16.45■□□□□ 0.22
LRRK1-201ENST00000388948 RETREG2Q8NC44 543 aa16.45■□□□□ 0.22
LRRK1-201ENST00000388948 E7EWF7 191 aa16.44■□□□□ 0.22
LRRK1-201ENST00000388948 PDE6AP16499 860 aa16.44■□□□□ 0.22
LRRK1-201ENST00000388948 USP26Q9BXU7 913 aa16.44■□□□□ 0.22
LRRK1-201ENST00000388948 ZNF277Q9NRM2 450 aaPredicted RBP16.44■□□□□ 0.22
LRRK1-201ENST00000388948 XPAP23025 273 aaPredicted RBP16.44■□□□□ 0.22
LRRK1-201ENST00000388948 KRT81Q14533 505 aa16.44■□□□□ 0.22
LRRK1-201ENST00000388948 KRT40Q6A162 431 aa16.44■□□□□ 0.22
LRRK1-201ENST00000388948 INTS4Q96HW7 963 aaKnown RBP16.44■□□□□ 0.22
LRRK1-201ENST00000388948 PBRM1Q86U86 1689 aa16.44■□□□□ 0.22
LRRK1-201ENST00000388948 SLC12A2P55011 1212 aa16.44■□□□□ 0.22
LRRK1-201ENST00000388948 EEPD1Q7L9B9 569 aa16.44■□□□□ 0.22
LRRK1-201ENST00000388948 MKRN1Q9UHC7 482 aaKnown RBP16.44■□□□□ 0.22
LRRK1-201ENST00000388948 GDF11O95390 407 aa16.44■□□□□ 0.22
LRRK1-201ENST00000388948 DLATP10515 647 aaKnown RBP16.44■□□□□ 0.22
LRRK1-201ENST00000388948 EDC3Q96F86 508 aaKnown RBP16.44■□□□□ 0.22
LRRK1-201ENST00000388948 CCDC17Q96LX7 622 aa16.44■□□□□ 0.22
LRRK1-201ENST00000388948 SWAP70Q9UH65 585 aa16.44■□□□□ 0.22
LRRK1-201ENST00000388948 PNMA3Q9UL41 463 aa16.44■□□□□ 0.22
LRRK1-201ENST00000388948 ATP5JP18859 108 aa16.44■□□□□ 0.22
LRRK1-201ENST00000388948 SRGAP1Q7Z6B7 1085 aa16.44■□□□□ 0.22
LRRK1-201ENST00000388948 CCDC89Q8N998 374 aa16.44■□□□□ 0.22
LRRK1-201ENST00000388948 STAMQ92783 540 aa16.44■□□□□ 0.22
LRRK1-201ENST00000388948 SHANK2Q9UPX8 1470 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 XPOTO43592 962 aaKnown RBP16.43■□□□□ 0.22
LRRK1-201ENST00000388948 ATXN8OSP0DMR3 200 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 NPR1P16066 1061 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 KIF11P52732 1056 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 ZBTB33Q86T24 672 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 USP17L3A6NCW0 530 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 USP17L4A6NCW7 530 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 GOLGA6CA6NDK9 693 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 GOLGA6BA6NDN3 693 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 GOLGA6DP0CG33 693 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 USP17L1Q7RTZ2 530 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 FAM178BQ8IXR5 827 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 AFAP1L2Q8N4X5 818 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 GOLGA6AQ9NYA3 693 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 ESYT2A0FGR8 921 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 KIF9Q9HAQ2 790 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 HSPA4P34932 840 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 LRRC24Q50LG9 513 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 NOP9Q86U38 636 aaKnown RBP16.43■□□□□ 0.22
LRRK1-201ENST00000388948 BAG1Q99933 345 aaPredicted RBP16.43■□□□□ 0.22
LRRK1-201ENST00000388948 NEO1Q92859 1461 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 BLIDQ8IZY5 108 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 ZBTB9Q96C00 473 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 MLH3Q9UHC1 1453 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 AFF2P51816 1311 aa16.43■□□□□ 0.22
LRRK1-201ENST00000388948 GTF2F1P35269 517 aaKnown RBP eCLIP16.42■□□□□ 0.22
LRRK1-201ENST00000388948 ARPP19P56211 112 aa16.42■□□□□ 0.22
LRRK1-201ENST00000388948 DSCC1Q9BVC3 393 aa16.42■□□□□ 0.22
LRRK1-201ENST00000388948 SNX14Q9Y5W7 946 aa16.42■□□□□ 0.22
LRRK1-201ENST00000388948 SYNJ2BP-COX16A0A087WUM0 186 aa16.42■□□□□ 0.22
LRRK1-201ENST00000388948 TRIM14Q14142 442 aa16.42■□□□□ 0.22
LRRK1-201ENST00000388948 RSRC2Q7L4I2 434 aaKnown RBP16.42■□□□□ 0.22
LRRK1-201ENST00000388948 SEC62Q99442 399 aaKnown RBP16.42■□□□□ 0.22
LRRK1-201ENST00000388948 BLZF1Q9H2G9 400 aa16.42■□□□□ 0.22
LRRK1-201ENST00000388948 COX16Q9P0S2 106 aa16.42■□□□□ 0.22
LRRK1-201ENST00000388948 ASIC3Q9UHC3 531 aa16.42■□□□□ 0.22
LRRK1-201ENST00000388948 UBXN2AP68543 259 aa16.42■□□□□ 0.22
LRRK1-201ENST00000388948 ELMSAN1Q6PJG2 1045 aa16.42■□□□□ 0.22
LRRK1-201ENST00000388948 IL17REQ8NFR9 667 aa16.42■□□□□ 0.22
LRRK1-201ENST00000388948 ACTN4O43707 911 aaKnown RBP16.42■□□□□ 0.22
LRRK1-201ENST00000388948 RHOXF2BP0C7M4 288 aa16.42■□□□□ 0.22
LRRK1-201ENST00000388948 CCDC110Q8TBZ0 833 aa16.42■□□□□ 0.22
LRRK1-201ENST00000388948 RHOXF2Q9BQY4 288 aa16.42■□□□□ 0.22
LRRK1-201ENST00000388948 KDRP35968 1356 aa16.42■□□□□ 0.22
LRRK1-201ENST00000388948 AOX1Q06278 1338 aa16.42■□□□□ 0.22
LRRK1-201ENST00000388948 INO80B-WBP1J3KQ70 363 aa16.42■□□□□ 0.22
LRRK1-201ENST00000388948 MAN1A1P33908 653 aa16.42■□□□□ 0.22
LRRK1-201ENST00000388948 MUM1L1Q5H9M0 696 aa16.42■□□□□ 0.22
LRRK1-201ENST00000388948 SNX21Q969T3 373 aa16.42■□□□□ 0.22
LRRK1-201ENST00000388948 INO80BQ9C086 356 aaPredicted RBP16.42■□□□□ 0.22
LRRK1-201ENST00000388948 UTP11Q9Y3A2 253 aaKnown RBP16.42■□□□□ 0.22
LRRK1-201ENST00000388948 WDR17Q8IZU2 1322 aa16.42■□□□□ 0.22
LRRK1-201ENST00000388948 KCTD1Q719H9 257 aa16.41■□□□□ 0.22
LRRK1-201ENST00000388948 METTL23Q86XA0 190 aa16.41■□□□□ 0.22
LRRK1-201ENST00000388948 NKIRAS1Q9NYS0 192 aa16.41■□□□□ 0.22
LRRK1-201ENST00000388948 SKA2Q8WVK7 121 aaPredicted RBP16.41■□□□□ 0.22
LRRK1-201ENST00000388948 GPKOWQ92917 476 aaPredicted RBP eCLIP16.41■□□□□ 0.22
LRRK1-201ENST00000388948 AMNQ9BXJ7 453 aa16.41■□□□□ 0.22
LRRK1-201ENST00000388948 C1orf112Q9NSG2 853 aa16.41■□□□□ 0.22
LRRK1-201ENST00000388948 SKIV2LQ15477 1246 aaKnown RBP16.41■□□□□ 0.22
LRRK1-201ENST00000388948 POMGNT1Q8WZA1 660 aa16.41■□□□□ 0.22
LRRK1-201ENST00000388948 NUP58Q9BVL2 599 aa16.41■□□□□ 0.22
LRRK1-201ENST00000388948 FAM184BQ9ULE4 1060 aa16.41■□□□□ 0.22
LRRK1-201ENST00000388948 KLHL30Q0D2K2 578 aa16.41■□□□□ 0.22
LRRK1-201ENST00000388948 SMC5Q8IY18 1101 aa16.41■□□□□ 0.22
LRRK1-201ENST00000388948 RYBPQ8N488 228 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms