RNA–Protein interactions for RNA: ENST00000384578.1

RNU6-878P-201, Transcript of RNA, U6 small nuclear 878, pseudogene, humanhuman

BASIC

Gene RNU6-878P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-878P-201ENST00000384578 KLHL3Q9UH77 587 aa5.73□□□□□ -1.49
RNU6-878P-201ENST00000384578 TMA7Q9Y2S6 64 aaKnown RBP5.73□□□□□ -1.49
RNU6-878P-201ENST00000384578 HTR3BO95264 441 aa5.72□□□□□ -1.49
RNU6-878P-201ENST00000384578 KRT1P04264 644 aa5.72□□□□□ -1.49
RNU6-878P-201ENST00000384578 SSBP05455 408 aaKnown RBP eCLIP5.72□□□□□ -1.49
RNU6-878P-201ENST00000384578 SRFP11831 508 aa5.72□□□□□ -1.49
RNU6-878P-201ENST00000384578 BMS1Q14692 1282 aaKnown RBP5.72□□□□□ -1.49
RNU6-878P-201ENST00000384578 NBPF6Q5VWK0 638 aa5.72□□□□□ -1.49
RNU6-878P-201ENST00000384578 CCDC84Q86UT8 332 aaPredicted RBP5.72□□□□□ -1.49
RNU6-878P-201ENST00000384578 GOLM1Q8NBJ4 401 aa5.72□□□□□ -1.49
RNU6-878P-201ENST00000384578 BAHD1Q8TBE0 780 aaPredicted RBP5.72□□□□□ -1.49
RNU6-878P-201ENST00000384578 NBPF4Q96M43 638 aa5.72□□□□□ -1.49
RNU6-878P-201ENST00000384578 NSUN3Q9H649 340 aaKnown RBP5.72□□□□□ -1.49
RNU6-878P-201ENST00000384578 C19orf44Q9H6X5 657 aa5.72□□□□□ -1.49
RNU6-878P-201ENST00000384578 TMEM59LQ9UK28 342 aa5.72□□□□□ -1.49
RNU6-878P-201ENST00000384578 SUPT16HQ9Y5B9 1047 aaKnown RBP5.72□□□□□ -1.49
RNU6-878P-201ENST00000384578 MRVI1Q9Y6F6 885 aa5.72□□□□□ -1.49
RNU6-878P-201ENST00000384578 PRR36Q9H6K5 1346 aa5.72□□□□□ -1.49
RNU6-878P-201ENST00000384578 ARID1BQ8NFD5 2236 aaPredicted RBP5.71□□□□□ -1.49
RNU6-878P-201ENST00000384578 SHISA3A0PJX4 238 aa5.71□□□□□ -1.5
RNU6-878P-201ENST00000384578 TLR3O15455 904 aaKnown RBP5.71□□□□□ -1.5
RNU6-878P-201ENST00000384578 KLF4O43474 513 aa5.71□□□□□ -1.5
RNU6-878P-201ENST00000384578 TIGD5Q53EQ6 642 aa5.71□□□□□ -1.5
RNU6-878P-201ENST00000384578 SDE2Q6IQ49 451 aa5.71□□□□□ -1.5
RNU6-878P-201ENST00000384578 FAM196AQ6ZSG2 479 aa5.71□□□□□ -1.5
RNU6-878P-201ENST00000384578 SYDE1Q6ZW31 735 aaPredicted RBP5.71□□□□□ -1.5
RNU6-878P-201ENST00000384578 JAZF1Q86VZ6 243 aa5.71□□□□□ -1.5
RNU6-878P-201ENST00000384578 CKAP2LQ8IYA6 745 aa5.71□□□□□ -1.5
RNU6-878P-201ENST00000384578 SLFN12Q8IYM2 578 aa5.71□□□□□ -1.5
RNU6-878P-201ENST00000384578 ABHD4Q8TB40 342 aa5.71□□□□□ -1.5
RNU6-878P-201ENST00000384578 GPR62Q9BZJ7 368 aa5.71□□□□□ -1.5
RNU6-878P-201ENST00000384578 SP110Q9HB58 689 aa5.71□□□□□ -1.5
RNU6-878P-201ENST00000384578 DUSP13Q9UII6 198 aa5.71□□□□□ -1.5
RNU6-878P-201ENST00000384578 PCDHA11Q9Y5I1 949 aa5.71□□□□□ -1.5
RNU6-878P-201ENST00000384578 YARSP54577 528 aaKnown RBP5.7□□□□□ -1.5
RNU6-878P-201ENST00000384578 EGR3Q06889 387 aa5.7□□□□□ -1.5
RNU6-878P-201ENST00000384578 APOBRQ0VD83 1088 aa5.7□□□□□ -1.5
RNU6-878P-201ENST00000384578 COL9A2Q14055 689 aaPredicted RBP5.7□□□□□ -1.5
RNU6-878P-201ENST00000384578 SNAP47Q5SQN1 464 aa5.7□□□□□ -1.5
RNU6-878P-201ENST00000384578 TSPYL5Q86VY4 417 aaPredicted RBP5.7□□□□□ -1.5
RNU6-878P-201ENST00000384578 SLITRK4Q8IW52 837 aa5.7□□□□□ -1.5
RNU6-878P-201ENST00000384578 KREMEN1Q96MU8 473 aa5.7□□□□□ -1.5
RNU6-878P-201ENST00000384578 KIF2CQ99661 725 aa5.7□□□□□ -1.5
RNU6-878P-201ENST00000384578 EBF1Q9UH73 591 aa5.7□□□□□ -1.5
RNU6-878P-201ENST00000384578 STRIP2Q9ULQ0 834 aa5.7□□□□□ -1.5
RNU6-878P-201ENST00000384578 CDK11AQ9UQ88 783 aaPredicted RBP5.7□□□□□ -1.5
RNU6-878P-201ENST00000384578 ANKRD62A6NC57 917 aa5.69□□□□□ -1.5
RNU6-878P-201ENST00000384578 TSPAN15O95858 294 aa5.69□□□□□ -1.5
RNU6-878P-201ENST00000384578 HPXP02790 462 aa5.69□□□□□ -1.5
RNU6-878P-201ENST00000384578 ZGLP1P0C6A0 271 aa5.69□□□□□ -1.5
RNU6-878P-201ENST00000384578 C1QTNF9P0C862 333 aa5.69□□□□□ -1.5
RNU6-878P-201ENST00000384578 CFPP27918 469 aa5.69□□□□□ -1.5
RNU6-878P-201ENST00000384578 RAP1GAPP47736 663 aa5.69□□□□□ -1.5
RNU6-878P-201ENST00000384578 EGFLAMQ63HQ2 1017 aa5.69□□□□□ -1.5
RNU6-878P-201ENST00000384578 ANKS3Q6ZW76 656 aa5.69□□□□□ -1.5
RNU6-878P-201ENST00000384578 REC114Q7Z4M0 266 aa5.69□□□□□ -1.5
RNU6-878P-201ENST00000384578 C1QL4Q86Z23 238 aa5.69□□□□□ -1.5
RNU6-878P-201ENST00000384578 MYLIPQ8WY64 445 aa5.69□□□□□ -1.5
RNU6-878P-201ENST00000384578 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
RNU6-878P-201ENST00000384578 RNF32Q9H0A6 362 aa5.69□□□□□ -1.5
RNU6-878P-201ENST00000384578 TRIT1Q9H3H1 467 aaKnown RBP5.69□□□□□ -1.5
RNU6-878P-201ENST00000384578 GPATCH2Q9NW75 528 aa5.69□□□□□ -1.5
RNU6-878P-201ENST00000384578 PPM1GO15355 546 aaPredicted RBP5.68□□□□□ -1.5
RNU6-878P-201ENST00000384578 RAC2P15153 192 aa5.68□□□□□ -1.5
RNU6-878P-201ENST00000384578 RAB33AQ14088 237 aa5.68□□□□□ -1.5
RNU6-878P-201ENST00000384578 NFE2L2Q16236 605 aa5.68□□□□□ -1.5
RNU6-878P-201ENST00000384578 SEZ6Q53EL9 994 aa5.68□□□□□ -1.5
RNU6-878P-201ENST00000384578 RNF141Q8WVD5 230 aa5.68□□□□□ -1.5
RNU6-878P-201ENST00000384578 NKD1Q969G9 470 aa5.68□□□□□ -1.5
RNU6-878P-201ENST00000384578 MKL1Q969V6 931 aa5.68□□□□□ -1.5
RNU6-878P-201ENST00000384578 ANAPC16Q96DE5 110 aa5.68□□□□□ -1.5
RNU6-878P-201ENST00000384578 SHDQ96IW2 340 aa5.68□□□□□ -1.5
RNU6-878P-201ENST00000384578 LRRC3Q9BY71 257 aa5.68□□□□□ -1.5
RNU6-878P-201ENST00000384578 PPT2Q9UMR5 302 aa5.68□□□□□ -1.5
RNU6-878P-201ENST00000384578 MRPL42Q9Y6G3 142 aaKnown RBP5.68□□□□□ -1.5
RNU6-878P-201ENST00000384578 SBNO2Q9Y2G9 1366 aa5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 LTKP29376 864 aa5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 GALK1P51570 392 aa5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 MPP2Q14168 576 aa5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 TCEAL1Q15170 157 aa5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 FBLN7Q53RD9 439 aa5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 CCDC81Q6ZN84 652 aa5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 LCNL1Q6ZST4 164 aa5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 PHACTR4Q8IZ21 702 aa5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 FAM169BQ8N8A8 192 aa5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 FBXO15Q8NCQ5 510 aaPredicted RBP5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 BHLHE22Q8NFJ8 381 aaPredicted RBP5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 CPLX3Q8WVH0 158 aa5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 HNRNPLLQ8WVV9 542 aaKnown RBP5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 VWCEQ96DN2 955 aa5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 CCDC120Q96HB5 630 aa5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 CCDC74BQ96LY2 380 aa5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 SRRTQ9BXP5 876 aaKnown RBP5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 DCP1AQ9NPI6 582 aaPredicted RBP5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 PRKAG3Q9UGI9 489 aa5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 KCNH3Q9ULD8 1083 aa5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 ROBO2Q9HCK4 1378 aa5.67□□□□□ -1.5
RNU6-878P-201ENST00000384578 FAM221BA6H8Z2 402 aa5.66□□□□□ -1.5
RNU6-878P-201ENST00000384578 UBOX5O94941 541 aa5.66□□□□□ -1.5
RNU6-878P-201ENST00000384578 EFEMP2O95967 443 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms