RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 FAM83BQ5T0W9 1011 aa16.95■□□□□ 0.3
SHOX-202ENST00000381575 ANO1Q5XXA6 986 aa16.95■□□□□ 0.3
SHOX-202ENST00000381575 PI4K2BQ8TCG2 481 aa16.95■□□□□ 0.3
SHOX-202ENST00000381575 CRBNQ96SW2 442 aa16.95■□□□□ 0.3
SHOX-202ENST00000381575 KANSL2Q9H9L4 492 aa16.95■□□□□ 0.3
SHOX-202ENST00000381575 APPP05067 770 aa16.94■□□□□ 0.3
SHOX-202ENST00000381575 SBK1Q52WX2 424 aa16.94■□□□□ 0.3
SHOX-202ENST00000381575 MB21D1Q8N884 522 aa16.94■□□□□ 0.3
SHOX-202ENST00000381575 MKNK2Q9HBH9 465 aa16.94■□□□□ 0.3
SHOX-202ENST00000381575 GOPCQ9HD26 462 aa16.94■□□□□ 0.3
SHOX-202ENST00000381575 MCM3APO60318 1980 aa16.94■□□□□ 0.3
SHOX-202ENST00000381575 ROBO3Q96MS0 1386 aa16.94■□□□□ 0.3
SHOX-202ENST00000381575 COL6A1P12109 1028 aa16.93■□□□□ 0.3
SHOX-202ENST00000381575 LRRC26Q2I0M4 334 aa16.93■□□□□ 0.3
SHOX-202ENST00000381575 PRAMEF19Q5SWL8 479 aa16.93■□□□□ 0.3
SHOX-202ENST00000381575 SHCBP1Q8NEM2 672 aa16.93■□□□□ 0.3
SHOX-202ENST00000381575 YTHDC1Q96MU7 727 aaKnown RBP16.93■□□□□ 0.3
SHOX-202ENST00000381575 FSD1Q9BTV5 496 aa16.93■□□□□ 0.3
SHOX-202ENST00000381575 DDX20Q9UHI6 824 aaKnown RBP16.93■□□□□ 0.3
SHOX-202ENST00000381575 TTC41PQ6P2S7 1318 aa16.93■□□□□ 0.3
SHOX-202ENST00000381575 SOX1O00570 391 aaPredicted RBP16.92■□□□□ 0.3
SHOX-202ENST00000381575 ZFYP08048 801 aaPredicted RBP16.92■□□□□ 0.3
SHOX-202ENST00000381575 CYBAP13498 195 aa16.92■□□□□ 0.3
SHOX-202ENST00000381575 GIMAP6Q6P9H5 292 aa16.92■□□□□ 0.3
SHOX-202ENST00000381575 COL6A3P12111 3177 aa16.92■□□□□ 0.3
SHOX-202ENST00000381575 ERC2O15083 957 aa16.91■□□□□ 0.3
SHOX-202ENST00000381575 STRNO43815 780 aa16.91■□□□□ 0.3
SHOX-202ENST00000381575 IGHA2P01877 340 aa16.91■□□□□ 0.3
SHOX-202ENST00000381575 PGK2P07205 417 aa16.91■□□□□ 0.3
SHOX-202ENST00000381575 MX1P20591 662 aa16.91■□□□□ 0.3
SHOX-202ENST00000381575 CCDC129Q6ZRS4 1044 aa16.91■□□□□ 0.3
SHOX-202ENST00000381575 MROH8Q9H579 483 aa16.91■□□□□ 0.3
SHOX-202ENST00000381575 PPP1R9AQ9ULJ8 1098 aa16.91■□□□□ 0.3
SHOX-202ENST00000381575 VWA5AO00534 786 aa16.9■□□□□ 0.3
SHOX-202ENST00000381575 NDUFB10O96000 172 aa16.9■□□□□ 0.3
SHOX-202ENST00000381575 MYCNP04198 464 aaPredicted RBP16.9■□□□□ 0.3
SHOX-202ENST00000381575 MAGEA10P43363 369 aaPredicted RBP16.9■□□□□ 0.3
SHOX-202ENST00000381575 ATN1P54259 1190 aaPredicted RBP16.9■□□□□ 0.3
SHOX-202ENST00000381575 OLFML2BQ68BL8 750 aa16.9■□□□□ 0.3
SHOX-202ENST00000381575 IFNL3Q8IZI9 196 aa16.9■□□□□ 0.3
SHOX-202ENST00000381575 CHMP4CQ96CF2 233 aa16.9■□□□□ 0.3
SHOX-202ENST00000381575 GDF15Q99988 308 aa16.9■□□□□ 0.3
SHOX-202ENST00000381575 SENP6Q9GZR1 1112 aaPredicted RBP16.9■□□□□ 0.3
SHOX-202ENST00000381575 CLIP2Q9UDT6 1046 aa16.9■□□□□ 0.3
SHOX-202ENST00000381575 FCER1AP12319 257 aa16.89■□□□□ 0.3
SHOX-202ENST00000381575 GNAT2P19087 354 aa16.89■□□□□ 0.3
SHOX-202ENST00000381575 SLC4A3P48751 1232 aa16.89■□□□□ 0.3
SHOX-202ENST00000381575 ZMYM1Q5SVZ6 1142 aa16.89■□□□□ 0.3
SHOX-202ENST00000381575 GJC2Q5T442 439 aaPredicted RBP16.89■□□□□ 0.3
SHOX-202ENST00000381575 ANKRD45Q5TZF3 282 aa16.89■□□□□ 0.3
SHOX-202ENST00000381575 LRRC47Q8N1G4 583 aaKnown RBP16.89■□□□□ 0.3
SHOX-202ENST00000381575 REPS2Q8NFH8 660 aa16.89■□□□□ 0.3
SHOX-202ENST00000381575 CEP95Q96GE4 821 aa16.89■□□□□ 0.3
SHOX-202ENST00000381575 LRCH3Q96II8 777 aa16.89■□□□□ 0.3
SHOX-202ENST00000381575 MAML3Q96JK9 1138 aa16.89■□□□□ 0.3
SHOX-202ENST00000381575 MMP19Q99542 508 aa16.89■□□□□ 0.3
SHOX-202ENST00000381575 ZNF214Q9UL59 606 aaPredicted RBP16.89■□□□□ 0.3
SHOX-202ENST00000381575 ADAMTS5Q9UNA0 930 aa16.89■□□□□ 0.3
SHOX-202ENST00000381575 SALL3Q9BXA9 1300 aa16.89■□□□□ 0.29
SHOX-202ENST00000381575 IGKV6D-41A0A0C4DH26 115 aa16.89■□□□□ 0.29
SHOX-202ENST00000381575 PATL2C9JE40 543 aaKnown RBP16.89■□□□□ 0.29
SHOX-202ENST00000381575 F5H6K3 240 aa16.89■□□□□ 0.29
SHOX-202ENST00000381575 STAT3P40763 770 aa16.89■□□□□ 0.29
SHOX-202ENST00000381575 KLRC3Q07444 240 aa16.89■□□□□ 0.29
SHOX-202ENST00000381575 FAM47AQ5JRC9 791 aa16.89■□□□□ 0.29
SHOX-202ENST00000381575 RIOX2Q8IUF8 465 aa16.89■□□□□ 0.29
SHOX-202ENST00000381575 ZNF444Q8N0Y2 327 aaPredicted RBP16.89■□□□□ 0.29
SHOX-202ENST00000381575 SLF1Q9BQI6 1058 aa16.89■□□□□ 0.29
SHOX-202ENST00000381575 NYAP2Q9P242 653 aa16.89■□□□□ 0.29
SHOX-202ENST00000381575 FOXP2O15409 715 aa16.88■□□□□ 0.29
SHOX-202ENST00000381575 SLC25A27O95847 323 aa16.88■□□□□ 0.29
SHOX-202ENST00000381575 ABRAQ8N0Z2 381 aa16.88■□□□□ 0.29
SHOX-202ENST00000381575 NAPBQ9H115 298 aa16.88■□□□□ 0.29
SHOX-202ENST00000381575 MSCO60682 206 aa16.87■□□□□ 0.29
SHOX-202ENST00000381575 TAL1P17542 331 aaPredicted RBP16.87■□□□□ 0.29
SHOX-202ENST00000381575 MDM2Q00987 491 aaPredicted RBP16.87■□□□□ 0.29
SHOX-202ENST00000381575 CTDSPL2Q05D32 466 aa16.87■□□□□ 0.29
SHOX-202ENST00000381575 PPARAQ07869 468 aa16.87■□□□□ 0.29
SHOX-202ENST00000381575 LRRFIP1Q32MZ4 808 aaKnown RBP16.87■□□□□ 0.29
SHOX-202ENST00000381575 SNRNP48Q6IEG0 339 aaKnown RBP16.87■□□□□ 0.29
SHOX-202ENST00000381575 KIFC2Q96AC6 838 aa16.87■□□□□ 0.29
SHOX-202ENST00000381575 LENG1Q96BZ8 264 aaPredicted RBP16.87■□□□□ 0.29
SHOX-202ENST00000381575 NACAP1Q9BZK3 213 aa16.87■□□□□ 0.29
SHOX-202ENST00000381575 INCENPQ9NQS7 918 aa16.87■□□□□ 0.29
SHOX-202ENST00000381575 SLC5A4Q9NY91 659 aa16.87■□□□□ 0.29
SHOX-202ENST00000381575 MTMR4Q9NYA4 1195 aa16.87■□□□□ 0.29
SHOX-202ENST00000381575 ISY1Q9ULR0 285 aaKnown RBP16.87■□□□□ 0.29
SHOX-202ENST00000381575 RIPK3Q9Y572 518 aa16.87■□□□□ 0.29
SHOX-202ENST00000381575 LTBP2Q14767 1821 aa16.86■□□□□ 0.29
SHOX-202ENST00000381575 DNM1LO00429 736 aa16.86■□□□□ 0.29
SHOX-202ENST00000381575 SEPT4O43236 478 aa16.86■□□□□ 0.29
SHOX-202ENST00000381575 KCTD2Q14681 263 aa16.86■□□□□ 0.29
SHOX-202ENST00000381575 VPS53Q5VIR6 699 aa16.86■□□□□ 0.29
SHOX-202ENST00000381575 CPXCR1Q8N123 301 aa16.86■□□□□ 0.29
SHOX-202ENST00000381575 ZBTB47Q9UFB7 747 aaPredicted RBP16.86■□□□□ 0.29
SHOX-202ENST00000381575 A0A1W2PPC1 479 aa16.85■□□□□ 0.29
SHOX-202ENST00000381575 TSPY3P0CV98 308 aa16.85■□□□□ 0.29
SHOX-202ENST00000381575 TSPY8P0CW00 308 aa16.85■□□□□ 0.29
SHOX-202ENST00000381575 RASGRP2Q7LDG7 609 aa16.85■□□□□ 0.29
SHOX-202ENST00000381575 FERMT2Q96AC1 680 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms