RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 NEDD1Q8NHV4 660 aa13.72□□□□□ -0.21
APOBEC3F-202ENST00000381565 NKX2-3Q8TAU0 364 aa13.72□□□□□ -0.21
APOBEC3F-202ENST00000381565 LPAR1Q92633 364 aa13.72□□□□□ -0.21
APOBEC3F-202ENST00000381565 DPF3Q92784 378 aa13.72□□□□□ -0.21
APOBEC3F-202ENST00000381565 CEP95Q96GE4 821 aa13.72□□□□□ -0.21
APOBEC3F-202ENST00000381565 RNF208Q9H0X6 261 aa13.72□□□□□ -0.21
APOBEC3F-202ENST00000381565 UNC93B1Q9H1C4 597 aa13.72□□□□□ -0.21
APOBEC3F-202ENST00000381565 SH2D4AQ9H788 454 aa13.72□□□□□ -0.21
APOBEC3F-202ENST00000381565 MYH6P13533 1939 aa13.72□□□□□ -0.21
APOBEC3F-202ENST00000381565 TNPO2O14787 897 aaKnown RBP13.71□□□□□ -0.21
APOBEC3F-202ENST00000381565 WDR46O15213 610 aaKnown RBP13.71□□□□□ -0.21
APOBEC3F-202ENST00000381565 ORC4O43929 436 aa13.71□□□□□ -0.21
APOBEC3F-202ENST00000381565 HOXD10P28358 340 aa13.71□□□□□ -0.21
APOBEC3F-202ENST00000381565 ERVK-9P63128 1117 aa13.71□□□□□ -0.21
APOBEC3F-202ENST00000381565 ERVK-24P63145 666 aa13.71□□□□□ -0.21
APOBEC3F-202ENST00000381565 ATP2B2Q01814 1243 aa13.71□□□□□ -0.21
APOBEC3F-202ENST00000381565 Q3C1V9 767 aa13.71□□□□□ -0.21
APOBEC3F-202ENST00000381565 TBC1D10CQ8IV04 446 aa13.71□□□□□ -0.21
APOBEC3F-202ENST00000381565 U2AF1L4Q8WU68 220 aaKnown RBP13.71□□□□□ -0.21
APOBEC3F-202ENST00000381565 PAGR1Q9BTK6 254 aa13.71□□□□□ -0.21
APOBEC3F-202ENST00000381565 TANGO6Q9C0B7 1094 aa13.71□□□□□ -0.21
APOBEC3F-202ENST00000381565 ZNF287Q9HBT7 754 aa13.71□□□□□ -0.21
APOBEC3F-202ENST00000381565 MTMR4Q9NYA4 1195 aa13.71□□□□□ -0.21
APOBEC3F-202ENST00000381565 BTBD7Q9P203 1132 aa13.71□□□□□ -0.21
APOBEC3F-202ENST00000381565 NYAP2Q9P242 653 aa13.71□□□□□ -0.21
APOBEC3F-202ENST00000381565 LCTP09848 1927 aa13.7□□□□□ -0.22
APOBEC3F-202ENST00000381565 RAD50Q92878 1312 aa13.7□□□□□ -0.22
APOBEC3F-202ENST00000381565 SLC3A2P08195 630 aaKnown RBP13.7□□□□□ -0.22
APOBEC3F-202ENST00000381565 CHMLP26374 656 aa13.7□□□□□ -0.22
APOBEC3F-202ENST00000381565 MFAP1P55081 439 aaKnown RBP13.7□□□□□ -0.22
APOBEC3F-202ENST00000381565 HAND2P61296 217 aa13.7□□□□□ -0.22
APOBEC3F-202ENST00000381565 TFAP4Q01664 338 aa13.7□□□□□ -0.22
APOBEC3F-202ENST00000381565 ZNF444Q8N0Y2 327 aaPredicted RBP13.7□□□□□ -0.22
APOBEC3F-202ENST00000381565 SLAIN1Q8ND83 568 aa13.7□□□□□ -0.22
APOBEC3F-202ENST00000381565 GTF3C2Q8WUA4 911 aaPredicted RBP13.7□□□□□ -0.22
APOBEC3F-202ENST00000381565 PORCNQ9H237 461 aa13.7□□□□□ -0.22
APOBEC3F-202ENST00000381565 A0A0C4DFX4 3053 aa13.7□□□□□ -0.22
APOBEC3F-202ENST00000381565 NEDD4P46934 1319 aa13.69□□□□□ -0.22
APOBEC3F-202ENST00000381565 SOX1O00570 391 aaPredicted RBP13.69□□□□□ -0.22
APOBEC3F-202ENST00000381565 NMT2O60551 498 aa13.69□□□□□ -0.22
APOBEC3F-202ENST00000381565 FARP2O94887 1054 aaPredicted RBP13.69□□□□□ -0.22
APOBEC3F-202ENST00000381565 NDUFB10O96000 172 aa13.69□□□□□ -0.22
APOBEC3F-202ENST00000381565 TSPY3P0CV98 308 aa13.69□□□□□ -0.22
APOBEC3F-202ENST00000381565 TSPY8P0CW00 308 aa13.69□□□□□ -0.22
APOBEC3F-202ENST00000381565 ELNP15502 786 aa13.69□□□□□ -0.22
APOBEC3F-202ENST00000381565 FLT3LGP49771 235 aa13.69□□□□□ -0.22
APOBEC3F-202ENST00000381565 FAM83BQ5T0W9 1011 aa13.69□□□□□ -0.22
APOBEC3F-202ENST00000381565 LRRC47Q8N1G4 583 aaKnown RBP13.69□□□□□ -0.22
APOBEC3F-202ENST00000381565 GPRC5AQ8NFJ5 357 aa13.69□□□□□ -0.22
APOBEC3F-202ENST00000381565 MKL1Q969V6 931 aa13.69□□□□□ -0.22
APOBEC3F-202ENST00000381565 NUP88Q99567 741 aaPredicted RBP13.69□□□□□ -0.22
APOBEC3F-202ENST00000381565 HTATIP2Q9BUP3 242 aa13.69□□□□□ -0.22
APOBEC3F-202ENST00000381565 DSCC1Q9BVC3 393 aa13.69□□□□□ -0.22
APOBEC3F-202ENST00000381565 GOPCQ9HD26 462 aa13.69□□□□□ -0.22
APOBEC3F-202ENST00000381565 IL17RBQ9NRM6 502 aa13.69□□□□□ -0.22
APOBEC3F-202ENST00000381565 FBXO28Q9NVF7 368 aa13.69□□□□□ -0.22
APOBEC3F-202ENST00000381565 RABGAP1Q9Y3P9 1069 aa13.69□□□□□ -0.22
APOBEC3F-202ENST00000381565 MCM3APO60318 1980 aa13.69□□□□□ -0.22
APOBEC3F-202ENST00000381565 ADCY3O60266 1144 aa13.68□□□□□ -0.22
APOBEC3F-202ENST00000381565 SGPL1O95470 568 aa13.68□□□□□ -0.22
APOBEC3F-202ENST00000381565 TTLL1O95922 423 aa13.68□□□□□ -0.22
APOBEC3F-202ENST00000381565 INHAP05111 366 aa13.68□□□□□ -0.22
APOBEC3F-202ENST00000381565 NOVP48745 357 aa13.68□□□□□ -0.22
APOBEC3F-202ENST00000381565 UBXN2AP68543 259 aa13.68□□□□□ -0.22
APOBEC3F-202ENST00000381565 COG2Q14746 738 aa13.68□□□□□ -0.22
APOBEC3F-202ENST00000381565 RASGRP2Q7LDG7 609 aa13.68□□□□□ -0.22
APOBEC3F-202ENST00000381565 STAG1Q8WVM7 1258 aa13.68□□□□□ -0.22
APOBEC3F-202ENST00000381565 ATG4CQ96DT6 458 aa13.68□□□□□ -0.22
APOBEC3F-202ENST00000381565 BIN2Q9UBW5 565 aaPredicted RBP13.68□□□□□ -0.22
APOBEC3F-202ENST00000381565 CLIP2Q9UDT6 1046 aa13.68□□□□□ -0.22
APOBEC3F-202ENST00000381565 GJD2Q9UKL4 321 aa13.68□□□□□ -0.22
APOBEC3F-202ENST00000381565 ALPK3Q96L96 1907 aa13.68□□□□□ -0.22
APOBEC3F-202ENST00000381565 TSPY2A6NKD2 308 aa13.67□□□□□ -0.22
APOBEC3F-202ENST00000381565 F5H6K3 240 aa13.67□□□□□ -0.22
APOBEC3F-202ENST00000381565 RANBP6O60518 1105 aaKnown RBP13.67□□□□□ -0.22
APOBEC3F-202ENST00000381565 FLOT1O75955 427 aa13.67□□□□□ -0.22
APOBEC3F-202ENST00000381565 KLRC3Q07444 240 aa13.67□□□□□ -0.22
APOBEC3F-202ENST00000381565 IRF5Q13568 498 aa13.67□□□□□ -0.22
APOBEC3F-202ENST00000381565 GSE1Q14687 1217 aa13.67□□□□□ -0.22
APOBEC3F-202ENST00000381565 AKNAD1Q5T1N1 836 aa13.67□□□□□ -0.22
APOBEC3F-202ENST00000381565 GMCL1P1Q8NEA9 526 aa13.67□□□□□ -0.22
APOBEC3F-202ENST00000381565 COA7Q96BR5 231 aa13.67□□□□□ -0.22
APOBEC3F-202ENST00000381565 PAK6Q9NQU5 681 aaPredicted RBP13.67□□□□□ -0.22
APOBEC3F-202ENST00000381565 SYNPO2Q9UMS6 1093 aa13.67□□□□□ -0.22
APOBEC3F-202ENST00000381565 ADAMTS5Q9UNA0 930 aa13.67□□□□□ -0.22
APOBEC3F-202ENST00000381565 SGSM2O43147 1006 aa13.66□□□□□ -0.22
APOBEC3F-202ENST00000381565 RAD21O60216 631 aa13.66□□□□□ -0.22
APOBEC3F-202ENST00000381565 MAPK4P31152 587 aa13.66□□□□□ -0.22
APOBEC3F-202ENST00000381565 PTH1RQ03431 593 aa13.66□□□□□ -0.22
APOBEC3F-202ENST00000381565 GPR142Q7Z601 462 aa13.66□□□□□ -0.22
APOBEC3F-202ENST00000381565 REPS2Q8NFH8 660 aa13.66□□□□□ -0.22
APOBEC3F-202ENST00000381565 PXYLP1Q8TE99 480 aa13.66□□□□□ -0.22
APOBEC3F-202ENST00000381565 USP6NLQ92738 828 aa13.66□□□□□ -0.22
APOBEC3F-202ENST00000381565 FAM212AQ96EL1 285 aa13.66□□□□□ -0.22
APOBEC3F-202ENST00000381565 CCDC136Q96JN2 1154 aa13.66□□□□□ -0.22
APOBEC3F-202ENST00000381565 CRISPLD2Q9H0B8 497 aa13.66□□□□□ -0.22
APOBEC3F-202ENST00000381565 PPP1R9AQ9ULJ8 1098 aa13.66□□□□□ -0.22
APOBEC3F-202ENST00000381565 LRRC37A2A6NM11 1700 aa13.65□□□□□ -0.22
APOBEC3F-202ENST00000381565 RRP12Q5JTH9 1297 aaKnown RBP13.65□□□□□ -0.22
APOBEC3F-202ENST00000381565 MORN1Q5T089 497 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms