RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 MMP19Q99542 508 aa19.25■□□□□ 0.67
VCX3A-201ENST00000381089 CHMP4BQ9H444 224 aaKnown RBP19.25■□□□□ 0.67
VCX3A-201ENST00000381089 KANSL2Q9H9L4 492 aa19.25■□□□□ 0.67
VCX3A-201ENST00000381089 UNC80Q8N2C7 3258 aa19.25■□□□□ 0.67
VCX3A-201ENST00000381089 CDK8P49336 464 aa19.24■□□□□ 0.67
VCX3A-201ENST00000381089 TMEM132BQ14DG7 1078 aa19.24■□□□□ 0.67
VCX3A-201ENST00000381089 PRAMEF19Q5SWL8 479 aa19.24■□□□□ 0.67
VCX3A-201ENST00000381089 C12orf60Q5U649 245 aa19.24■□□□□ 0.67
VCX3A-201ENST00000381089 RNF180Q86T96 592 aa19.24■□□□□ 0.67
VCX3A-201ENST00000381089 BADQ92934 168 aa19.24■□□□□ 0.67
VCX3A-201ENST00000381089 FERMT2Q96AC1 680 aa19.24■□□□□ 0.67
VCX3A-201ENST00000381089 XPNPEP3Q9NQH7 507 aa19.24■□□□□ 0.67
VCX3A-201ENST00000381089 PRKAB2O43741 272 aa19.23■□□□□ 0.67
VCX3A-201ENST00000381089 SHHQ15465 462 aa19.23■□□□□ 0.67
VCX3A-201ENST00000381089 FAM47AQ5JRC9 791 aa19.23■□□□□ 0.67
VCX3A-201ENST00000381089 ZSCAN25Q6NSZ9 544 aa19.23■□□□□ 0.67
VCX3A-201ENST00000381089 C16orf86Q6ZW13 317 aa19.23■□□□□ 0.67
VCX3A-201ENST00000381089 RIOX2Q8IUF8 465 aa19.23■□□□□ 0.67
VCX3A-201ENST00000381089 CLEC10AQ8IUN9 316 aa19.23■□□□□ 0.67
VCX3A-201ENST00000381089 SIAH1Q8IUQ4 282 aa19.23■□□□□ 0.67
VCX3A-201ENST00000381089 BOLA2Q9H3K6 86 aa19.23■□□□□ 0.67
VCX3A-201ENST00000381089 PDLIM7Q9NR12 457 aa19.23■□□□□ 0.67
VCX3A-201ENST00000381089 DDX19BQ9UMR2 479 aa19.23■□□□□ 0.67
VCX3A-201ENST00000381089 DIS3Q9Y2L1 958 aaKnown RBP19.23■□□□□ 0.67
VCX3A-201ENST00000381089 USP17L12C9JPN9 530 aa19.22■□□□□ 0.67
VCX3A-201ENST00000381089 USP17L21D6R901 530 aa19.22■□□□□ 0.67
VCX3A-201ENST00000381089 RAD21O60216 631 aa19.22■□□□□ 0.67
VCX3A-201ENST00000381089 EEF2P13639 858 aaKnown RBP19.22■□□□□ 0.67
VCX3A-201ENST00000381089 ATP5JP18859 108 aa19.22■□□□□ 0.67
VCX3A-201ENST00000381089 STAT3P40763 770 aa19.22■□□□□ 0.67
VCX3A-201ENST00000381089 TINF2Q9BSI4 451 aa19.22■□□□□ 0.67
VCX3A-201ENST00000381089 PHF24Q9UPV7 400 aa19.22■□□□□ 0.67
VCX3A-201ENST00000381089 TACC3Q9Y6A5 838 aa19.22■□□□□ 0.67
VCX3A-201ENST00000381089 BAZ2AQ9UIF9 1905 aaKnown RBP19.21■□□□□ 0.67
VCX3A-201ENST00000381089 SMAD3P84022 425 aaKnown RBP19.21■□□□□ 0.67
VCX3A-201ENST00000381089 UBE3CQ15386 1083 aa19.21■□□□□ 0.67
VCX3A-201ENST00000381089 HAUS7Q99871 368 aa19.21■□□□□ 0.67
VCX3A-201ENST00000381089 PPP1R9AQ9ULJ8 1098 aa19.21■□□□□ 0.67
VCX3A-201ENST00000381089 ADAMTS5Q9UNA0 930 aa19.21■□□□□ 0.67
VCX3A-201ENST00000381089 CNPY2Q9Y2B0 182 aa19.21■□□□□ 0.67
VCX3A-201ENST00000381089 SLC4A4Q9Y6R1 1079 aa19.21■□□□□ 0.67
VCX3A-201ENST00000381089 ZNFX1Q9P2E3 1918 aaKnown RBP19.21■□□□□ 0.67
VCX3A-201ENST00000381089 ZBED9Q6R2W3 1325 aa19.21■□□□□ 0.67
VCX3A-201ENST00000381089 VWA5AO00534 786 aa19.2■□□□□ 0.66
VCX3A-201ENST00000381089 PGK2P07205 417 aa19.2■□□□□ 0.66
VCX3A-201ENST00000381089 CLTBP09497 229 aa19.2■□□□□ 0.66
VCX3A-201ENST00000381089 AKR1A1P14550 325 aa19.2■□□□□ 0.66
VCX3A-201ENST00000381089 TLE2Q04725 743 aa19.2■□□□□ 0.66
VCX3A-201ENST00000381089 C9orf50Q5SZB4 431 aa19.2■□□□□ 0.66
VCX3A-201ENST00000381089 COL25A1Q9BXS0 654 aaPredicted RBP19.2■□□□□ 0.66
VCX3A-201ENST00000381089 ARPP21Q9UBL0 812 aaPredicted RBP19.2■□□□□ 0.66
VCX3A-201ENST00000381089 PARP14Q460N5 1801 aa19.2■□□□□ 0.66
VCX3A-201ENST00000381089 ROBO3Q96MS0 1386 aa19.19■□□□□ 0.66
VCX3A-201ENST00000381089 CYP2D7A0A087X1C5 515 aa19.19■□□□□ 0.66
VCX3A-201ENST00000381089 TRIM43BA6NCK2 446 aa19.19■□□□□ 0.66
VCX3A-201ENST00000381089 MSL3Q8N5Y2 521 aaKnown RBP19.19■□□□□ 0.66
VCX3A-201ENST00000381089 TRIM43Q96BQ3 446 aaPredicted RBP19.19■□□□□ 0.66
VCX3A-201ENST00000381089 CDX2Q99626 313 aaPredicted RBP19.19■□□□□ 0.66
VCX3A-201ENST00000381089 SEMA6BQ9H3T3 888 aa19.19■□□□□ 0.66
VCX3A-201ENST00000381089 FBXO28Q9NVF7 368 aa19.19■□□□□ 0.66
VCX3A-201ENST00000381089 COL11A1P12107 1806 aaPredicted RBP19.18■□□□□ 0.66
VCX3A-201ENST00000381089 PGK1P00558 417 aa19.18■□□□□ 0.66
VCX3A-201ENST00000381089 RAG1P15918 1043 aa19.18■□□□□ 0.66
VCX3A-201ENST00000381089 ZNF792Q3KQV3 632 aa19.18■□□□□ 0.66
VCX3A-201ENST00000381089 FAM83BQ5T0W9 1011 aa19.18■□□□□ 0.66
VCX3A-201ENST00000381089 SH3RF1Q7Z6J0 888 aa19.18■□□□□ 0.66
VCX3A-201ENST00000381089 RNPC3Q96LT9 517 aaKnown RBP19.18■□□□□ 0.66
VCX3A-201ENST00000381089 CTDP1Q9Y5B0 961 aaPredicted RBP19.18■□□□□ 0.66
VCX3A-201ENST00000381089 PLXNA1Q9UIW2 1896 aa19.18■□□□□ 0.66
VCX3A-201ENST00000381089 SMCHD1A6NHR9 2005 aa19.17■□□□□ 0.66
VCX3A-201ENST00000381089 A0A1W2PQ45 241 aaPredicted RBP19.17■□□□□ 0.66
VCX3A-201ENST00000381089 A0A1W2PQY0 241 aa19.17■□□□□ 0.66
VCX3A-201ENST00000381089 PQBP1O60828 265 aaKnown RBP19.17■□□□□ 0.66
VCX3A-201ENST00000381089 SLFNL1Q499Z3 407 aa19.17■□□□□ 0.66
VCX3A-201ENST00000381089 CTR9Q6PD62 1173 aa19.17■□□□□ 0.66
VCX3A-201ENST00000381089 MAFAQ8NHW3 353 aaPredicted RBP19.17■□□□□ 0.66
VCX3A-201ENST00000381089 NUP133Q8WUM0 1156 aa19.17■□□□□ 0.66
VCX3A-201ENST00000381089 SLF1Q9BQI6 1058 aa19.17■□□□□ 0.66
VCX3A-201ENST00000381089 TSEN34Q9BSV6 310 aaKnown RBP19.17■□□□□ 0.66
VCX3A-201ENST00000381089 TEX13BQ9BXU2 312 aa19.17■□□□□ 0.66
VCX3A-201ENST00000381089 ZBTB40Q9NUA8 1239 aa19.17■□□□□ 0.66
VCX3A-201ENST00000381089 ZNF214Q9UL59 606 aaPredicted RBP19.17■□□□□ 0.66
VCX3A-201ENST00000381089 MYH7P12883 1935 aa19.17■□□□□ 0.66
VCX3A-201ENST00000381089 TMEM265A0A087WTH1 108 aa19.16■□□□□ 0.66
VCX3A-201ENST00000381089 DCDC2CA8MYV0 355 aa19.16■□□□□ 0.66
VCX3A-201ENST00000381089 SIRT2Q8IXJ6 389 aa19.16■□□□□ 0.66
VCX3A-201ENST00000381089 DDX11Q96FC9 970 aa19.16■□□□□ 0.66
VCX3A-201ENST00000381089 MKNK2Q9HBH9 465 aa19.16■□□□□ 0.66
VCX3A-201ENST00000381089 STARD7Q9NQZ5 370 aa19.16■□□□□ 0.66
VCX3A-201ENST00000381089 TMEM39AQ9NV64 488 aa19.16■□□□□ 0.66
VCX3A-201ENST00000381089 FAM184BQ9ULE4 1060 aa19.16■□□□□ 0.66
VCX3A-201ENST00000381089 COG6Q9Y2V7 657 aa19.16■□□□□ 0.66
VCX3A-201ENST00000381089 KIAA0355O15063 1070 aa19.15■□□□□ 0.66
VCX3A-201ENST00000381089 ZNF865P0CJ78 1059 aaPredicted RBP19.15■□□□□ 0.66
VCX3A-201ENST00000381089 FPGSQ05932 587 aa19.15■□□□□ 0.66
VCX3A-201ENST00000381089 SNRNP48Q6IEG0 339 aaKnown RBP19.15■□□□□ 0.66
VCX3A-201ENST00000381089 LRRCC1Q9C099 1032 aa19.15■□□□□ 0.66
VCX3A-201ENST00000381089 ZNF287Q9HBT7 754 aa19.15■□□□□ 0.66
VCX3A-201ENST00000381089 SYNGAP1Q96PV0 1343 aa19.15■□□□□ 0.66
VCX3A-201ENST00000381089 MOXD2PA6NHM9 499 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms