RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 PTPREP23469 700 aa16.29■□□□□ 0.2
CLCN4-201ENST00000380829 NLRP5P59047 1200 aa16.29■□□□□ 0.2
CLCN4-201ENST00000380829 SYCP1Q15431 976 aa16.29■□□□□ 0.2
CLCN4-201ENST00000380829 ZRSR1Q15695 479 aaKnown RBP16.29■□□□□ 0.2
CLCN4-201ENST00000380829 SLC15A2Q16348 729 aa16.29■□□□□ 0.2
CLCN4-201ENST00000380829 CCDC178Q5BJE1 867 aa16.29■□□□□ 0.2
CLCN4-201ENST00000380829 CCDC112Q8NEF3 446 aa16.29■□□□□ 0.2
CLCN4-201ENST00000380829 TRIM5Q9C035 493 aa16.29■□□□□ 0.2
CLCN4-201ENST00000380829 SUGT1Q9Y2Z0 365 aa16.29■□□□□ 0.2
CLCN4-201ENST00000380829 FAM237AA0A1B0GTK4 181 aa16.28■□□□□ 0.2
CLCN4-201ENST00000380829 GOLGA6L19H0YKK7 550 aa16.28■□□□□ 0.2
CLCN4-201ENST00000380829 GOLGA8HP0CJ92 632 aa16.28■□□□□ 0.2
CLCN4-201ENST00000380829 SLC35G1Q2M3R5 365 aa16.28■□□□□ 0.2
CLCN4-201ENST00000380829 ISM2Q6H9L7 571 aa16.28■□□□□ 0.2
CLCN4-201ENST00000380829 PAXIP1Q6ZW49 1069 aaPredicted RBP16.28■□□□□ 0.2
CLCN4-201ENST00000380829 DHX40Q8IX18 779 aaKnown RBP16.28■□□□□ 0.2
CLCN4-201ENST00000380829 CEP57L1Q8IYX8 460 aa16.28■□□□□ 0.2
CLCN4-201ENST00000380829 TNFRSF25Q93038 417 aa16.28■□□□□ 0.2
CLCN4-201ENST00000380829 TRIM75PA6NK02 468 aa16.28■□□□□ 0.2
CLCN4-201ENST00000380829 BECN2A8MW95 431 aa16.28■□□□□ 0.2
CLCN4-201ENST00000380829 TPM3P06753 285 aa16.28■□□□□ 0.2
CLCN4-201ENST00000380829 LONRF3Q496Y0 759 aa16.28■□□□□ 0.2
CLCN4-201ENST00000380829 NEDD1Q8NHV4 660 aa16.28■□□□□ 0.2
CLCN4-201ENST00000380829 CEP95Q96GE4 821 aa16.28■□□□□ 0.2
CLCN4-201ENST00000380829 CPVLQ9H3G5 476 aa16.28■□□□□ 0.2
CLCN4-201ENST00000380829 USP40Q9NVE5 1235 aa16.28■□□□□ 0.2
CLCN4-201ENST00000380829 CEP131Q9UPN4 1083 aa16.28■□□□□ 0.2
CLCN4-201ENST00000380829 ADAMTSL1Q8N6G6 1762 aa16.28■□□□□ 0.2
CLCN4-201ENST00000380829 PNOCQ13519 176 aa16.27■□□□□ 0.2
CLCN4-201ENST00000380829 AOPEPQ8N6M6 819 aa16.27■□□□□ 0.2
CLCN4-201ENST00000380829 TRIM34Q9BYJ4 488 aa16.27■□□□□ 0.2
CLCN4-201ENST00000380829 CYTH3O43739 400 aa16.27■□□□□ 0.19
CLCN4-201ENST00000380829 PIK3AP1Q6ZUJ8 805 aa16.27■□□□□ 0.19
CLCN4-201ENST00000380829 ZNF174Q15697 407 aa16.26■□□□□ 0.19
CLCN4-201ENST00000380829 USP49Q70CQ1 688 aa16.26■□□□□ 0.19
CLCN4-201ENST00000380829 CNNM3Q8NE01 707 aa16.26■□□□□ 0.19
CLCN4-201ENST00000380829 CSRNP2Q9H175 543 aa16.26■□□□□ 0.19
CLCN4-201ENST00000380829 SRPRBQ9Y5M8 271 aaKnown RBP16.26■□□□□ 0.19
CLCN4-201ENST00000380829 SLX4Q8IY92 1834 aa16.26■□□□□ 0.19
CLCN4-201ENST00000380829 FOCADQ5VW36 1801 aa16.26■□□□□ 0.19
CLCN4-201ENST00000380829 FOXN1O15353 648 aa16.26■□□□□ 0.19
CLCN4-201ENST00000380829 ZNF75DP51815 510 aa16.26■□□□□ 0.19
CLCN4-201ENST00000380829 STYK1Q6J9G0 422 aa16.26■□□□□ 0.19
CLCN4-201ENST00000380829 TYW1BQ6NUM6 668 aa16.26■□□□□ 0.19
CLCN4-201ENST00000380829 CDC42EP5Q6NZY7 148 aa16.26■□□□□ 0.19
CLCN4-201ENST00000380829 KRBA2Q6ZNG9 492 aa16.26■□□□□ 0.19
CLCN4-201ENST00000380829 METTL16Q86W50 562 aaKnown RBP16.26■□□□□ 0.19
CLCN4-201ENST00000380829 KIAA0825Q8IV33 1275 aa16.26■□□□□ 0.19
CLCN4-201ENST00000380829 DRC7Q8IY82 874 aa16.26■□□□□ 0.19
CLCN4-201ENST00000380829 TEKT1Q969V4 418 aa16.26■□□□□ 0.19
CLCN4-201ENST00000380829 CAMKK2Q96RR4 588 aa16.26■□□□□ 0.19
CLCN4-201ENST00000380829 NAT10Q9H0A0 1025 aaKnown RBP16.26■□□□□ 0.19
CLCN4-201ENST00000380829 PCDHAC2Q9Y5I4 1007 aa16.26■□□□□ 0.19
CLCN4-201ENST00000380829 PALM3A6NDB9 673 aaPredicted RBP16.25■□□□□ 0.19
CLCN4-201ENST00000380829 GNAQP50148 359 aa16.25■□□□□ 0.19
CLCN4-201ENST00000380829 APOBEC3HQ6NTF7 200 aaKnown RBP16.25■□□□□ 0.19
CLCN4-201ENST00000380829 PODNQ7Z5L7 613 aa16.25■□□□□ 0.19
CLCN4-201ENST00000380829 PLA2G4DQ86XP0 818 aa16.25■□□□□ 0.19
CLCN4-201ENST00000380829 PDILTQ8N807 584 aa16.25■□□□□ 0.19
CLCN4-201ENST00000380829 PDGFDQ9GZP0 370 aaPredicted RBP16.25■□□□□ 0.19
CLCN4-201ENST00000380829 STK32BQ9NY57 414 aa16.25■□□□□ 0.19
CLCN4-201ENST00000380829 QSER1Q2KHR3 1735 aa16.25■□□□□ 0.19
CLCN4-201ENST00000380829 POLR2DO15514 142 aaKnown RBP16.25■□□□□ 0.19
CLCN4-201ENST00000380829 NLRP12P59046 1061 aa16.25■□□□□ 0.19
CLCN4-201ENST00000380829 TTC38Q5R3I4 469 aa16.25■□□□□ 0.19
CLCN4-201ENST00000380829 FBXO38Q6PIJ6 1188 aa16.25■□□□□ 0.19
CLCN4-201ENST00000380829 USP17L2Q6R6M4 530 aa16.25■□□□□ 0.19
CLCN4-201ENST00000380829 KLRF2D3W0D1 207 aa16.24■□□□□ 0.19
CLCN4-201ENST00000380829 TULP2O00295 520 aa16.24■□□□□ 0.19
CLCN4-201ENST00000380829 ECE2O60344 883 aa16.24■□□□□ 0.19
CLCN4-201ENST00000380829 NFIAQ12857 509 aa16.24■□□□□ 0.19
CLCN4-201ENST00000380829 TPD52L1Q16890 204 aaPredicted RBP16.24■□□□□ 0.19
CLCN4-201ENST00000380829 WWC2Q6AWC2 1192 aa16.24■□□□□ 0.19
CLCN4-201ENST00000380829 HEATR3Q7Z4Q2 680 aa16.24■□□□□ 0.19
CLCN4-201ENST00000380829 CLEC10AQ8IUN9 316 aa16.24■□□□□ 0.19
CLCN4-201ENST00000380829 RASGRP4Q8TDF6 673 aa16.24■□□□□ 0.19
CLCN4-201ENST00000380829 ZNF215Q9UL58 517 aaPredicted RBP16.24■□□□□ 0.19
CLCN4-201ENST00000380829 RGPD3A6NKT7 1758 aaPredicted RBP16.24■□□□□ 0.19
CLCN4-201ENST00000380829 RGPD4Q7Z3J3 1758 aa16.24■□□□□ 0.19
CLCN4-201ENST00000380829 SLURP2P0DP57 97 aa16.24■□□□□ 0.19
CLCN4-201ENST00000380829 AKR1B1P15121 316 aa16.24■□□□□ 0.19
CLCN4-201ENST00000380829 CRKP46108 304 aa16.24■□□□□ 0.19
CLCN4-201ENST00000380829 CACNB3P54284 484 aa16.24■□□□□ 0.19
CLCN4-201ENST00000380829 EIF6P56537 245 aaKnown RBP16.24■□□□□ 0.19
CLCN4-201ENST00000380829 GABPAQ06546 454 aa16.24■□□□□ 0.19
CLCN4-201ENST00000380829 SLC20A2Q08357 652 aa16.24■□□□□ 0.19
CLCN4-201ENST00000380829 ELF2Q15723 593 aa16.24■□□□□ 0.19
CLCN4-201ENST00000380829 HHIPL2Q6UWX4 724 aa16.24■□□□□ 0.19
CLCN4-201ENST00000380829 ZNF579Q8NAF0 562 aaKnown RBP16.24■□□□□ 0.19
CLCN4-201ENST00000380829 ZNF397Q8NF99 534 aaPredicted RBP16.24■□□□□ 0.19
CLCN4-201ENST00000380829 TUBE1Q9UJT0 475 aa16.24■□□□□ 0.19
CLCN4-201ENST00000380829 PARP1P09874 1014 aaKnown RBP16.23■□□□□ 0.19
CLCN4-201ENST00000380829 AOC3Q16853 763 aa16.23■□□□□ 0.19
CLCN4-201ENST00000380829 FOXP4Q8IVH2 680 aaPredicted RBP16.23■□□□□ 0.19
CLCN4-201ENST00000380829 BLIDQ8IZY5 108 aa16.23■□□□□ 0.19
CLCN4-201ENST00000380829 OSBPL5Q9H0X9 879 aaPredicted RBP16.23■□□□□ 0.19
CLCN4-201ENST00000380829 CALCOCO1Q9P1Z2 691 aa16.23■□□□□ 0.19
CLCN4-201ENST00000380829 SERTAD1Q9UHV2 236 aa16.23■□□□□ 0.19
CLCN4-201ENST00000380829 TOP1P11387 765 aaKnown RBP16.23■□□□□ 0.19
CLCN4-201ENST00000380829 HOMER1Q86YM7 354 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms