RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 NOL7Q9UMY1 257 aaKnown RBP22.77■■□□□ 1.24
PDLIM5-205ENST00000380180 FER1L6Q2WGJ9 1857 aa22.76■■□□□ 1.23
PDLIM5-205ENST00000380180 FAM196BA6NMK8 535 aa22.76■■□□□ 1.23
PDLIM5-205ENST00000380180 POLD1P28340 1107 aa22.76■■□□□ 1.23
PDLIM5-205ENST00000380180 SMARCA1P28370 1054 aa22.76■■□□□ 1.23
PDLIM5-205ENST00000380180 SYKP43405 635 aa22.76■■□□□ 1.23
PDLIM5-205ENST00000380180 CCDC17Q96LX7 622 aa22.76■■□□□ 1.23
PDLIM5-205ENST00000380180 MTFR1LQ9H019 292 aa22.76■■□□□ 1.23
PDLIM5-205ENST00000380180 GRIN1Q05586 938 aa22.75■■□□□ 1.23
PDLIM5-205ENST00000380180 HEATR3Q7Z4Q2 680 aa22.75■■□□□ 1.23
PDLIM5-205ENST00000380180 BLIDQ8IZY5 108 aa22.75■■□□□ 1.23
PDLIM5-205ENST00000380180 GMLQ99445 158 aa22.75■■□□□ 1.23
PDLIM5-205ENST00000380180 BARHL2Q9NY43 387 aa22.75■■□□□ 1.23
PDLIM5-205ENST00000380180 USP25Q9UHP3 1055 aa22.75■■□□□ 1.23
PDLIM5-205ENST00000380180 WNT7AO00755 349 aa22.75■■□□□ 1.23
PDLIM5-205ENST00000380180 SPECC1Q5M775 1068 aa22.75■■□□□ 1.23
PDLIM5-205ENST00000380180 PIK3AP1Q6ZUJ8 805 aa22.75■■□□□ 1.23
PDLIM5-205ENST00000380180 DNAJC25Q9H1X3 360 aa22.75■■□□□ 1.23
PDLIM5-205ENST00000380180 PCDHA4Q9UN74 947 aa22.75■■□□□ 1.23
PDLIM5-205ENST00000380180 SRPRBQ9Y5M8 271 aaKnown RBP22.75■■□□□ 1.23
PDLIM5-205ENST00000380180 STXBP3O00186 592 aa22.74■■□□□ 1.23
PDLIM5-205ENST00000380180 ENTPD3O75355 529 aa22.74■■□□□ 1.23
PDLIM5-205ENST00000380180 FOXP4Q8IVH2 680 aaPredicted RBP22.74■■□□□ 1.23
PDLIM5-205ENST00000380180 TIGD1Q96MW7 591 aa22.74■■□□□ 1.23
PDLIM5-205ENST00000380180 UBA5Q9GZZ9 404 aa22.74■■□□□ 1.23
PDLIM5-205ENST00000380180 CBX8Q9HC52 389 aa22.74■■□□□ 1.23
PDLIM5-205ENST00000380180 VAT1LQ9HCJ6 419 aa22.74■■□□□ 1.23
PDLIM5-205ENST00000380180 ZBTB12Q9Y330 459 aaPredicted RBP22.74■■□□□ 1.23
PDLIM5-205ENST00000380180 FRMPD2Q68DX3 1309 aaPredicted RBP22.74■■□□□ 1.23
PDLIM5-205ENST00000380180 SNHG28P0DPA3 235 aa22.74■■□□□ 1.23
PDLIM5-205ENST00000380180 CERKLQ49MI3 558 aaPredicted RBP22.74■■□□□ 1.23
PDLIM5-205ENST00000380180 RRP36Q96EU6 259 aaKnown RBP22.74■■□□□ 1.23
PDLIM5-205ENST00000380180 ZNRF3Q9ULT6 936 aa22.74■■□□□ 1.23
PDLIM5-205ENST00000380180 ZNF174Q15697 407 aa22.73■■□□□ 1.23
PDLIM5-205ENST00000380180 DALRD3Q5D0E6 543 aaKnown RBP22.73■■□□□ 1.23
PDLIM5-205ENST00000380180 TTC38Q5R3I4 469 aa22.73■■□□□ 1.23
PDLIM5-205ENST00000380180 LUZP1Q86V48 1076 aa22.73■■□□□ 1.23
PDLIM5-205ENST00000380180 NIM1KQ8IY84 436 aa22.73■■□□□ 1.23
PDLIM5-205ENST00000380180 ZNF579Q8NAF0 562 aaKnown RBP22.73■■□□□ 1.23
PDLIM5-205ENST00000380180 CCDC148Q8NFR7 591 aa22.73■■□□□ 1.23
PDLIM5-205ENST00000380180 TRIM34Q9BYJ4 488 aa22.73■■□□□ 1.23
PDLIM5-205ENST00000380180 RIOX1Q9H6W3 641 aa22.73■■□□□ 1.23
PDLIM5-205ENST00000380180 KIAA1468Q9P260 1216 aa22.73■■□□□ 1.23
PDLIM5-205ENST00000380180 KCNH3Q9ULD8 1083 aa22.73■■□□□ 1.23
PDLIM5-205ENST00000380180 MORC2Q9Y6X9 1032 aaPredicted RBP22.73■■□□□ 1.23
PDLIM5-205ENST00000380180 SPDYE2BA6NHP3 402 aa22.72■■□□□ 1.23
PDLIM5-205ENST00000380180 SPDYE6P0CI01 402 aa22.72■■□□□ 1.23
PDLIM5-205ENST00000380180 ZNF165P49910 485 aa22.72■■□□□ 1.23
PDLIM5-205ENST00000380180 STX1AQ16623 288 aa22.72■■□□□ 1.23
PDLIM5-205ENST00000380180 ASPRV1Q53RT3 343 aa22.72■■□□□ 1.23
PDLIM5-205ENST00000380180 TATDN1Q6P1N9 297 aa22.72■■□□□ 1.23
PDLIM5-205ENST00000380180 HOMER1Q86YM7 354 aa22.72■■□□□ 1.23
PDLIM5-205ENST00000380180 HDAC9Q9UKV0 1011 aa22.72■■□□□ 1.23
PDLIM5-205ENST00000380180 ATRNL1Q5VV63 1379 aa22.72■■□□□ 1.23
PDLIM5-205ENST00000380180 M0R2N6 131 aa22.72■■□□□ 1.23
PDLIM5-205ENST00000380180 ATP2B2Q01814 1243 aa22.72■■□□□ 1.23
PDLIM5-205ENST00000380180 OGFOD1Q8N543 542 aa22.72■■□□□ 1.23
PDLIM5-205ENST00000380180 PIGSQ96S52 555 aa22.72■■□□□ 1.23
PDLIM5-205ENST00000380180 PPP1R1BQ9UD71 204 aaPredicted RBP22.72■■□□□ 1.23
PDLIM5-205ENST00000380180 A0A087WWV3 80 aa22.71■■□□□ 1.23
PDLIM5-205ENST00000380180 CAVIN2O95810 425 aa22.71■■□□□ 1.23
PDLIM5-205ENST00000380180 BMP15O95972 392 aa22.71■■□□□ 1.23
PDLIM5-205ENST00000380180 TRAPPC10P48553 1259 aa22.71■■□□□ 1.23
PDLIM5-205ENST00000380180 SHROOM1Q2M3G4 852 aaPredicted RBP22.71■■□□□ 1.23
PDLIM5-205ENST00000380180 GALNT17Q6IS24 598 aa22.71■■□□□ 1.23
PDLIM5-205ENST00000380180 METTL16Q86W50 562 aaKnown RBP22.71■■□□□ 1.23
PDLIM5-205ENST00000380180 DAGLBQ8NCG7 672 aa22.71■■□□□ 1.23
PDLIM5-205ENST00000380180 SEC63Q9UGP8 760 aaKnown RBP22.71■■□□□ 1.23
PDLIM5-205ENST00000380180 R3HDM1Q15032 1099 aaKnown RBP22.7■■□□□ 1.23
PDLIM5-205ENST00000380180 DLGAP5Q15398 846 aa22.7■■□□□ 1.23
PDLIM5-205ENST00000380180 FAM177A1Q8N128 213 aaPredicted RBP22.7■■□□□ 1.23
PDLIM5-205ENST00000380180 RASGRP4Q8TDF6 673 aa22.7■■□□□ 1.23
PDLIM5-205ENST00000380180 CSRNP2Q9H175 543 aa22.7■■□□□ 1.23
PDLIM5-205ENST00000380180 GPCPD1Q9NPB8 672 aa22.7■■□□□ 1.23
PDLIM5-205ENST00000380180 FAM13BQ9NYF5 915 aa22.7■■□□□ 1.23
PDLIM5-205ENST00000380180 ADCY5O95622 1261 aa22.7■■□□□ 1.22
PDLIM5-205ENST00000380180 LONRF3Q496Y0 759 aa22.7■■□□□ 1.22
PDLIM5-205ENST00000380180 PPP4R3BQ5MIZ7 849 aa22.7■■□□□ 1.22
PDLIM5-205ENST00000380180 C11orf57Q6ZUT1 292 aaPredicted RBP22.7■■□□□ 1.22
PDLIM5-205ENST00000380180 ZMYND12Q9H0C1 365 aa22.7■■□□□ 1.22
PDLIM5-205ENST00000380180 ANO10Q9NW15 660 aa22.7■■□□□ 1.22
PDLIM5-205ENST00000380180 PCDHA6Q9UN73 950 aa22.7■■□□□ 1.22
PDLIM5-205ENST00000380180 PCDHA8Q9Y5H6 950 aa22.7■■□□□ 1.22
PDLIM5-205ENST00000380180 CLRN2A0PK11 232 aa22.69■■□□□ 1.22
PDLIM5-205ENST00000380180 TCP10L2B9ZVM9 353 aa22.69■■□□□ 1.22
PDLIM5-205ENST00000380180 AP5Z1O43299 807 aa22.69■■□□□ 1.22
PDLIM5-205ENST00000380180 NAPAP54920 295 aa22.69■■□□□ 1.22
PDLIM5-205ENST00000380180 PLCB2Q00722 1185 aa22.69■■□□□ 1.22
PDLIM5-205ENST00000380180 ZNF543Q08ER8 600 aa22.69■■□□□ 1.22
PDLIM5-205ENST00000380180 PTGDRQ13258 359 aa22.69■■□□□ 1.22
PDLIM5-205ENST00000380180 TMOD2Q9NZR1 351 aa22.69■■□□□ 1.22
PDLIM5-205ENST00000380180 COL2A1P02458 1487 aaPredicted RBP22.69■■□□□ 1.22
PDLIM5-205ENST00000380180 CXCL9Q07325 125 aa22.69■■□□□ 1.22
PDLIM5-205ENST00000380180 KANSL2Q9H9L4 492 aa22.69■■□□□ 1.22
PDLIM5-205ENST00000380180 ZNF70Q9UC06 446 aaPredicted RBP22.69■■□□□ 1.22
PDLIM5-205ENST00000380180 EEF2P13639 858 aaKnown RBP22.68■■□□□ 1.22
PDLIM5-205ENST00000380180 KRBA2Q6ZNG9 492 aa22.68■■□□□ 1.22
PDLIM5-205ENST00000380180 AGBL3Q8NEM8 1001 aa22.68■■□□□ 1.22
PDLIM5-205ENST00000380180 CCDC12Q8WUD4 166 aaPredicted RBP22.68■■□□□ 1.22
PDLIM5-205ENST00000380180 CSRNP1Q96S65 589 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms