RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 DBNLQ9UJU6 430 aaKnown RBP4.64□□□□□ -1.67
BRCA2-201ENST00000380152 TMEM232C9JQI7 657 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 IFNL3Q8IZI9 196 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 TUBGCP2Q9BSJ2 902 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 EFCC1Q9HA90 598 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 CLTCL1P53675 1640 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 ALDH3A1P30838 453 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 RFC4P35249 363 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 PUM3Q15397 648 aaKnown RBP4.64□□□□□ -1.67
BRCA2-201ENST00000380152 TTC16Q8NEE8 873 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 LRRC45Q96CN5 670 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 NHEJ1Q9H9Q4 299 aaPredicted RBP4.64□□□□□ -1.67
BRCA2-201ENST00000380152 PCDHA12Q9UN75 941 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 RIPOR2Q9Y4F9 1068 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 MED23Q9ULK4 1368 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 ZMYM6O95789 1325 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 E2F5Q15329 346 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 FCHSD1Q86WN1 690 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 TRIML1Q8N9V2 468 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 CCDC51Q96ER9 411 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 DCAF5Q96JK2 942 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 DLG5Q8TDM6 1919 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 BCRP11274 1271 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 XRCC5P13010 732 aaKnown RBP4.64□□□□□ -1.67
BRCA2-201ENST00000380152 POLR2FP61218 127 aaKnown RBP4.64□□□□□ -1.67
BRCA2-201ENST00000380152 LMNTD2Q8IXW0 634 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 ERMNQ8TAM6 284 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 CNOT6LQ96LI5 555 aaKnown RBP4.64□□□□□ -1.67
BRCA2-201ENST00000380152 RILPQ96NA2 401 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 SLC52A2Q9HAB3 445 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 MAN1B1Q9UKM7 699 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 CACNA1FO60840 1977 aa4.64□□□□□ -1.67
BRCA2-201ENST00000380152 B4DLN1 442 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 RGS16O15492 202 aaPredicted RBP4.63□□□□□ -1.67
BRCA2-201ENST00000380152 SRGAP2O75044 1071 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 LDHCP07864 332 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 NR5A1Q13285 461 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 NDUFA10O95299 355 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 CDC25AP30304 524 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 HERC4Q5GLZ8 1057 aaPredicted RBP4.63□□□□□ -1.67
BRCA2-201ENST00000380152 KAT6AQ92794 2004 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 VCXQ9H320 206 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 GOLPH3LQ9H4A5 285 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 MYO1AQ9UBC5 1043 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 RCOR1Q9UKL0 485 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 PCDHB13Q9Y5F0 798 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 SESN3P58005 492 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 GSTO1P78417 241 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 VWA3BQ502W6 1294 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 LRRC24Q50LG9 513 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 FAM47AQ5JRC9 791 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 FYB2Q5VWT5 728 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 TMEM87AQ8NBN3 555 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 NSUN7Q8NE18 718 aaKnown RBP4.63□□□□□ -1.67
BRCA2-201ENST00000380152 ACRBPQ8NEB7 543 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 KRT12Q99456 494 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 GPCPD1Q9NPB8 672 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 GIGYF1O75420 1035 aaPredicted RBP4.63□□□□□ -1.67
BRCA2-201ENST00000380152 PARP1P09874 1014 aaKnown RBP4.63□□□□□ -1.67
BRCA2-201ENST00000380152 ATP2A2P16615 1042 aaKnown RBP4.63□□□□□ -1.67
BRCA2-201ENST00000380152 SNCBQ16143 134 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 SDCCAG8Q86SQ7 713 aaPredicted RBP4.63□□□□□ -1.67
BRCA2-201ENST00000380152 ZNF654Q8IZM8 581 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 MCUR1Q96AQ8 359 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 TSKSQ9UJT2 592 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 ODF2LQ9ULJ1 636 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 PTCH1Q13635 1447 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 FLOT1O75955 427 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 TCP1P17987 556 aaKnown RBP4.63□□□□□ -1.67
BRCA2-201ENST00000380152 IFNAR2P48551 515 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 NELFCDQ8IXH7 590 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 PPFIBP2Q8ND30 876 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 RAB3IPQ96QF0 476 aaPredicted RBP4.63□□□□□ -1.67
BRCA2-201ENST00000380152 PSMD1Q99460 953 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 AMFRQ9UKV5 643 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 ZCCHC11Q5TAX3 1644 aaKnown RBP4.63□□□□□ -1.67
BRCA2-201ENST00000380152 TNNI2P48788 182 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 SFMBT2Q5VUG0 894 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 SEPT14Q6ZU15 432 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 SPATA5Q8NB90 893 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 SNX29Q8TEQ0 813 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 LPIN2Q92539 896 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 DPH5Q9H2P9 285 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 SLC39A2Q9NP94 309 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 LRWD1Q9UFC0 647 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 MRPS25P82663 173 aaKnown RBP4.63□□□□□ -1.67
BRCA2-201ENST00000380152 NAA35Q5VZE5 725 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 SARM1Q6SZW1 724 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 TEX11Q8IYF3 940 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 VPS52Q8N1B4 723 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 SREK1Q8WXA9 508 aaKnown RBP4.63□□□□□ -1.67
BRCA2-201ENST00000380152 KIFAP3Q92845 792 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 FERMT1Q9BQL6 677 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 MAK16Q9BXY0 300 aaKnown RBP4.63□□□□□ -1.67
BRCA2-201ENST00000380152 EHMT1Q9H9B1 1298 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 PARP2Q9UGN5 583 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 ITSN1Q15811 1721 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 CALUO43852 315 aaPredicted RBP4.63□□□□□ -1.67
BRCA2-201ENST00000380152 SMIM24O75264 130 aa4.63□□□□□ -1.67
BRCA2-201ENST00000380152 LDHBP07195 334 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms