RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 PSMD14O00487 310 aa24.61■■□□□ 1.53
TRIM54-202ENST00000380075 SCG2P13521 617 aa24.61■■□□□ 1.53
TRIM54-202ENST00000380075 MYL5Q02045 173 aa24.61■■□□□ 1.53
TRIM54-202ENST00000380075 CIAPIN1Q6FI81 312 aa24.61■■□□□ 1.53
TRIM54-202ENST00000380075 RCSD1Q6JBY9 416 aa24.61■■□□□ 1.53
TRIM54-202ENST00000380075 USP17L1Q7RTZ2 530 aa24.61■■□□□ 1.53
TRIM54-202ENST00000380075 SH3RF3Q8TEJ3 882 aaPredicted RBP24.61■■□□□ 1.53
TRIM54-202ENST00000380075 TNFRSF25Q93038 417 aa24.61■■□□□ 1.53
TRIM54-202ENST00000380075 TRAPPC10P48553 1259 aa24.6■■□□□ 1.53
TRIM54-202ENST00000380075 GNAQP50148 359 aa24.6■■□□□ 1.53
TRIM54-202ENST00000380075 PFKFB3Q16875 520 aaPredicted RBP24.6■■□□□ 1.53
TRIM54-202ENST00000380075 NT5DC1Q5TFE4 455 aa24.6■■□□□ 1.53
TRIM54-202ENST00000380075 TRIML1Q8N9V2 468 aa24.6■■□□□ 1.53
TRIM54-202ENST00000380075 MYRIPQ8NFW9 859 aa24.6■■□□□ 1.53
TRIM54-202ENST00000380075 MXD3Q9BW11 206 aa24.6■■□□□ 1.53
TRIM54-202ENST00000380075 PCDHA5Q9Y5H7 936 aa24.6■■□□□ 1.53
TRIM54-202ENST00000380075 GJA3Q9Y6H8 435 aa24.6■■□□□ 1.53
TRIM54-202ENST00000380075 NMT2O60551 498 aa24.6■■□□□ 1.53
TRIM54-202ENST00000380075 DDNO94850 711 aaPredicted RBP24.6■■□□□ 1.53
TRIM54-202ENST00000380075 PLCG2P16885 1265 aa24.6■■□□□ 1.53
TRIM54-202ENST00000380075 TFAP4Q01664 338 aa24.6■■□□□ 1.53
TRIM54-202ENST00000380075 EVX2Q03828 476 aa24.6■■□□□ 1.53
TRIM54-202ENST00000380075 POSTNQ15063 836 aa24.6■■□□□ 1.53
TRIM54-202ENST00000380075 SLF2Q8IX21 1173 aa24.6■■□□□ 1.53
TRIM54-202ENST00000380075 STRIP1Q5VSL9 837 aa24.59■■□□□ 1.53
TRIM54-202ENST00000380075 SH3GLB2Q9NR46 395 aa24.59■■□□□ 1.53
TRIM54-202ENST00000380075 DACH1Q9UI36 760 aa24.59■■□□□ 1.53
TRIM54-202ENST00000380075 SCN9AQ15858 1988 aa24.59■■□□□ 1.53
TRIM54-202ENST00000380075 POLR2DO15514 142 aaKnown RBP24.58■■□□□ 1.53
TRIM54-202ENST00000380075 CALML3P27482 149 aa24.58■■□□□ 1.53
TRIM54-202ENST00000380075 TNIP1Q15025 636 aa24.58■■□□□ 1.53
TRIM54-202ENST00000380075 NPY5RQ15761 445 aa24.58■■□□□ 1.53
TRIM54-202ENST00000380075 DACT2Q5SW24 774 aa24.58■■□□□ 1.53
TRIM54-202ENST00000380075 DPY19L2Q6NUT2 758 aa24.58■■□□□ 1.53
TRIM54-202ENST00000380075 MKNK2Q9HBH9 465 aa24.58■■□□□ 1.53
TRIM54-202ENST00000380075 ZBTB12Q9Y330 459 aaPredicted RBP24.58■■□□□ 1.53
TRIM54-202ENST00000380075 VIL1P09327 827 aaKnown RBP24.58■■□□□ 1.52
TRIM54-202ENST00000380075 GRIN1Q05586 938 aa24.58■■□□□ 1.52
TRIM54-202ENST00000380075 FAM177A1Q8N128 213 aaPredicted RBP24.58■■□□□ 1.52
TRIM54-202ENST00000380075 GPC2Q8N158 579 aa24.58■■□□□ 1.52
TRIM54-202ENST00000380075 TBC1D22AQ8WUA7 517 aa24.58■■□□□ 1.52
TRIM54-202ENST00000380075 NAV1Q8NEY1 1877 aa24.57■■□□□ 1.52
TRIM54-202ENST00000380075 GLTPD2A6NH11 291 aa24.57■■□□□ 1.52
TRIM54-202ENST00000380075 CBFA2T2O43439 604 aa24.57■■□□□ 1.52
TRIM54-202ENST00000380075 SMC2O95347 1197 aa24.57■■□□□ 1.52
TRIM54-202ENST00000380075 XPO4Q9C0E2 1151 aaKnown RBP24.57■■□□□ 1.52
TRIM54-202ENST00000380075 CSRNP2Q9H175 543 aa24.57■■□□□ 1.52
TRIM54-202ENST00000380075 GPR75-ASB3A0A0A6YYF3 556 aa24.56■■□□□ 1.52
TRIM54-202ENST00000380075 ATP2B1P20020 1258 aa24.56■■□□□ 1.52
TRIM54-202ENST00000380075 SARSP49591 514 aaKnown RBP24.56■■□□□ 1.52
TRIM54-202ENST00000380075 DIXDC1Q155Q3 683 aa24.56■■□□□ 1.52
TRIM54-202ENST00000380075 SPECC1Q5M775 1068 aa24.56■■□□□ 1.52
TRIM54-202ENST00000380075 FOXP4Q8IVH2 680 aaPredicted RBP24.56■■□□□ 1.52
TRIM54-202ENST00000380075 MLKLQ8NB16 471 aa24.56■■□□□ 1.52
TRIM54-202ENST00000380075 CCDC150Q8NCX0 1101 aa24.56■■□□□ 1.52
TRIM54-202ENST00000380075 PNMA1Q8ND90 353 aa24.56■■□□□ 1.52
TRIM54-202ENST00000380075 FAM163AQ96GL9 167 aaPredicted RBP24.56■■□□□ 1.52
TRIM54-202ENST00000380075 IFNKQ9P0W0 207 aa24.56■■□□□ 1.52
TRIM54-202ENST00000380075 FAM205AQ6ZU69 1335 aa24.56■■□□□ 1.52
TRIM54-202ENST00000380075 ACTN4O43707 911 aaKnown RBP24.56■■□□□ 1.52
TRIM54-202ENST00000380075 GTF2F1P35269 517 aaKnown RBP eCLIP24.56■■□□□ 1.52
TRIM54-202ENST00000380075 NLRP5P59047 1200 aa24.56■■□□□ 1.52
TRIM54-202ENST00000380075 GRM4Q14833 912 aa24.56■■□□□ 1.52
TRIM54-202ENST00000380075 TTC38Q5R3I4 469 aa24.56■■□□□ 1.52
TRIM54-202ENST00000380075 FILIP1Q7Z7B0 1213 aa24.56■■□□□ 1.52
TRIM54-202ENST00000380075 ZNF444Q8N0Y2 327 aaPredicted RBP24.56■■□□□ 1.52
TRIM54-202ENST00000380075 SMARCE1Q969G3 411 aa24.56■■□□□ 1.52
TRIM54-202ENST00000380075 IL17RBQ9NRM6 502 aa24.56■■□□□ 1.52
TRIM54-202ENST00000380075 SERTAD1Q9UHV2 236 aa24.56■■□□□ 1.52
TRIM54-202ENST00000380075 hCG_1642624A0A1W2PR95 340 aa24.55■■□□□ 1.52
TRIM54-202ENST00000380075 CT47A1Q5JQC4 288 aaPredicted RBP24.55■■□□□ 1.52
TRIM54-202ENST00000380075 RSBN1LQ6PCB5 846 aaPredicted RBP24.55■■□□□ 1.52
TRIM54-202ENST00000380075 CERS5Q8N5B7 392 aa24.55■■□□□ 1.52
TRIM54-202ENST00000380075 TGFBRAP1Q8WUH2 860 aa24.55■■□□□ 1.52
TRIM54-202ENST00000380075 TSPY3P0CV98 308 aa24.54■■□□□ 1.52
TRIM54-202ENST00000380075 TSPY8P0CW00 308 aa24.54■■□□□ 1.52
TRIM54-202ENST00000380075 FANCCQ00597 558 aa24.54■■□□□ 1.52
TRIM54-202ENST00000380075 EARS2Q5JPH6 523 aaKnown RBP24.54■■□□□ 1.52
TRIM54-202ENST00000380075 PYM1Q9BRP8 204 aaKnown RBP24.54■■□□□ 1.52
TRIM54-202ENST00000380075 MAN1B1Q9UKM7 699 aa24.54■■□□□ 1.52
TRIM54-202ENST00000380075 BTDP43251 543 aa24.54■■□□□ 1.52
TRIM54-202ENST00000380075 ATP2C1P98194 919 aaPredicted RBP24.54■■□□□ 1.52
TRIM54-202ENST00000380075 GRIK5Q16478 980 aa24.54■■□□□ 1.52
TRIM54-202ENST00000380075 MFSD14BQ5SR56 506 aa24.54■■□□□ 1.52
TRIM54-202ENST00000380075 ISM2Q6H9L7 571 aa24.54■■□□□ 1.52
TRIM54-202ENST00000380075 SPATA20Q8TB22 786 aa24.54■■□□□ 1.52
TRIM54-202ENST00000380075 LZTS2Q9BRK4 669 aa24.54■■□□□ 1.52
TRIM54-202ENST00000380075 KCND1Q9NSA2 647 aa24.54■■□□□ 1.52
TRIM54-202ENST00000380075 FAM205CA6NFA0 338 aa24.53■■□□□ 1.52
TRIM54-202ENST00000380075 SKILP12757 684 aa24.53■■□□□ 1.52
TRIM54-202ENST00000380075 GMPSP49915 693 aaPredicted RBP24.53■■□□□ 1.52
TRIM54-202ENST00000380075 ZNF526Q8TF50 670 aaPredicted RBP24.53■■□□□ 1.52
TRIM54-202ENST00000380075 DYNLL2Q96FJ2 89 aa24.53■■□□□ 1.52
TRIM54-202ENST00000380075 HSD3B7Q9H2F3 369 aa24.53■■□□□ 1.52
TRIM54-202ENST00000380075 NRDCO43847 1150 aa24.53■■□□□ 1.52
TRIM54-202ENST00000380075 LMOD1P29536 600 aaPredicted RBP24.53■■□□□ 1.52
TRIM54-202ENST00000380075 MORC3Q14149 939 aa24.53■■□□□ 1.52
TRIM54-202ENST00000380075 GALNT17Q6IS24 598 aa24.53■■□□□ 1.52
TRIM54-202ENST00000380075 GAKO14976 1311 aa24.52■■□□□ 1.52
TRIM54-202ENST00000380075 RRP9O43818 475 aaKnown RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms