RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 SCNN1DP51172 638 aa28.52■■■□□ 2.16
NDEL1-202ENST00000380025 TPM4P67936 248 aa28.52■■■□□ 2.16
NDEL1-202ENST00000380025 KANK3Q6NY19 840 aa28.52■■■□□ 2.16
NDEL1-202ENST00000380025 C2CD5Q86YS7 1000 aa28.52■■■□□ 2.16
NDEL1-202ENST00000380025 GRAMD1CQ8IYS0 662 aa28.52■■■□□ 2.16
NDEL1-202ENST00000380025 SPZ1Q9BXG8 430 aa28.52■■■□□ 2.16
NDEL1-202ENST00000380025 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.52■■■□□ 2.16
NDEL1-202ENST00000380025 MAN1B1Q9UKM7 699 aa28.52■■■□□ 2.16
NDEL1-202ENST00000380025 R3HCC1Q9Y3T6 440 aaKnown RBP28.52■■■□□ 2.16
NDEL1-202ENST00000380025 CACTINQ8WUQ7 758 aaKnown RBP28.52■■■□□ 2.16
NDEL1-202ENST00000380025 BARHL2Q9NY43 387 aa28.52■■■□□ 2.16
NDEL1-202ENST00000380025 STXBP3O00186 592 aa28.51■■■□□ 2.16
NDEL1-202ENST00000380025 DAGLBQ8NCG7 672 aa28.51■■■□□ 2.16
NDEL1-202ENST00000380025 USP40Q9NVE5 1235 aa28.51■■■□□ 2.16
NDEL1-202ENST00000380025 G3V3G9 751 aa28.51■■■□□ 2.15
NDEL1-202ENST00000380025 PARP1P09874 1014 aaKnown RBP28.51■■■□□ 2.15
NDEL1-202ENST00000380025 MYL5Q02045 173 aa28.51■■■□□ 2.15
NDEL1-202ENST00000380025 DCAF8Q5TAQ9 597 aa28.51■■■□□ 2.15
NDEL1-202ENST00000380025 HHIPL2Q6UWX4 724 aa28.51■■■□□ 2.15
NDEL1-202ENST00000380025 HEATR3Q7Z4Q2 680 aa28.51■■■□□ 2.15
NDEL1-202ENST00000380025 CCDC148Q8NFR7 591 aa28.51■■■□□ 2.15
NDEL1-202ENST00000380025 VWA3AA6NCI4 1184 aa28.5■■■□□ 2.15
NDEL1-202ENST00000380025 MCM7P33993 719 aa28.5■■■□□ 2.15
NDEL1-202ENST00000380025 RASGRP4Q8TDF6 673 aa28.5■■■□□ 2.15
NDEL1-202ENST00000380025 DHX58Q96C10 678 aa28.5■■■□□ 2.15
NDEL1-202ENST00000380025 CPVLQ9H3G5 476 aa28.5■■■□□ 2.15
NDEL1-202ENST00000380025 SLX4Q8IY92 1834 aa28.5■■■□□ 2.15
NDEL1-202ENST00000380025 USP17L2Q6R6M4 530 aa28.5■■■□□ 2.15
NDEL1-202ENST00000380025 SMARCE1Q969G3 411 aa28.5■■■□□ 2.15
NDEL1-202ENST00000380025 DBNDD1Q9H9R9 158 aa28.5■■■□□ 2.15
NDEL1-202ENST00000380025 LMOD1P29536 600 aaPredicted RBP28.49■■■□□ 2.15
NDEL1-202ENST00000380025 STYK1Q6J9G0 422 aa28.49■■■□□ 2.15
NDEL1-202ENST00000380025 CDC42EP5Q6NZY7 148 aa28.49■■■□□ 2.15
NDEL1-202ENST00000380025 PODNQ7Z5L7 613 aa28.49■■■□□ 2.15
NDEL1-202ENST00000380025 SPATA20Q8TB22 786 aa28.49■■■□□ 2.15
NDEL1-202ENST00000380025 XPO4Q9C0E2 1151 aaKnown RBP28.49■■■□□ 2.15
NDEL1-202ENST00000380025 KCNQ5Q9NR82 932 aa28.49■■■□□ 2.15
NDEL1-202ENST00000380025 IFNKQ9P0W0 207 aa28.49■■■□□ 2.15
NDEL1-202ENST00000380025 GALNT17Q6IS24 598 aa28.48■■■□□ 2.15
NDEL1-202ENST00000380025 APOBEC3HQ6NTF7 200 aaKnown RBP28.48■■■□□ 2.15
NDEL1-202ENST00000380025 TEKT1Q969V4 418 aa28.48■■■□□ 2.15
NDEL1-202ENST00000380025 PCDHA6Q9UN73 950 aa28.48■■■□□ 2.15
NDEL1-202ENST00000380025 PCDHA8Q9Y5H6 950 aa28.48■■■□□ 2.15
NDEL1-202ENST00000380025 ZNF646O15015 1829 aaPredicted RBP28.48■■■□□ 2.15
NDEL1-202ENST00000380025 SLFN14P0C7P3 912 aa28.48■■■□□ 2.15
NDEL1-202ENST00000380025 TERF1P54274 439 aa28.48■■■□□ 2.15
NDEL1-202ENST00000380025 MORC3Q14149 939 aa28.48■■■□□ 2.15
NDEL1-202ENST00000380025 IL17AQ16552 155 aa28.48■■■□□ 2.15
NDEL1-202ENST00000380025 FAM177A1Q8N128 213 aaPredicted RBP28.48■■■□□ 2.15
NDEL1-202ENST00000380025 MTMR4Q9NYA4 1195 aa28.48■■■□□ 2.15
NDEL1-202ENST00000380025 H0YIN7 160 aa28.47■■■□□ 2.15
NDEL1-202ENST00000380025 SH3RF1Q7Z6J0 888 aa28.47■■■□□ 2.15
NDEL1-202ENST00000380025 LRRC8AQ8IWT6 810 aa28.47■■■□□ 2.15
NDEL1-202ENST00000380025 C4orf32Q8N8J7 132 aa28.47■■■□□ 2.15
NDEL1-202ENST00000380025 OSBPL5Q9H0X9 879 aaPredicted RBP28.47■■■□□ 2.15
NDEL1-202ENST00000380025 IGKV6D-41A0A0C4DH26 115 aa28.47■■■□□ 2.15
NDEL1-202ENST00000380025 SMC2O95347 1197 aa28.47■■■□□ 2.15
NDEL1-202ENST00000380025 AKR1B1P15121 316 aa28.47■■■□□ 2.15
NDEL1-202ENST00000380025 ARID5BQ14865 1188 aa28.47■■■□□ 2.15
NDEL1-202ENST00000380025 TRIML1Q8N9V2 468 aa28.47■■■□□ 2.15
NDEL1-202ENST00000380025 ANO8Q9HCE9 1232 aaPredicted RBP28.47■■■□□ 2.15
NDEL1-202ENST00000380025 SCN9AQ15858 1988 aa28.47■■■□□ 2.15
NDEL1-202ENST00000380025 ATP1A3P13637 1013 aa28.46■■■□□ 2.15
NDEL1-202ENST00000380025 SMARCA1P28370 1054 aa28.46■■■□□ 2.15
NDEL1-202ENST00000380025 FILIP1Q7Z7B0 1213 aa28.46■■■□□ 2.15
NDEL1-202ENST00000380025 SERPINB13Q9UIV8 391 aa28.46■■■□□ 2.15
NDEL1-202ENST00000380025 CCDC194A0A1B0GVG4 234 aa28.45■■■□□ 2.15
NDEL1-202ENST00000380025 USP17L5A8MUK1 530 aa28.45■■■□□ 2.15
NDEL1-202ENST00000380025 CRKP46108 304 aa28.45■■■□□ 2.14
NDEL1-202ENST00000380025 FANCCQ00597 558 aa28.45■■■□□ 2.14
NDEL1-202ENST00000380025 DNTTIP2Q5QJE6 756 aaKnown RBP28.45■■■□□ 2.14
NDEL1-202ENST00000380025 ARL6IP4Q66PJ3 421 aaKnown RBP28.45■■■□□ 2.14
NDEL1-202ENST00000380025 PAGE5Q96GU1 130 aa28.45■■■□□ 2.14
NDEL1-202ENST00000380025 SWAP70Q9UH65 585 aa28.45■■■□□ 2.14
NDEL1-202ENST00000380025 PDHBP11177 359 aa28.44■■■□□ 2.14
NDEL1-202ENST00000380025 MLKLQ8NB16 471 aa28.44■■■□□ 2.14
NDEL1-202ENST00000380025 ZMYND12Q9H0C1 365 aa28.44■■■□□ 2.14
NDEL1-202ENST00000380025 MYO3BQ8WXR4 1341 aa28.44■■■□□ 2.14
NDEL1-202ENST00000380025 RRP36Q96EU6 259 aaKnown RBP28.44■■■□□ 2.14
NDEL1-202ENST00000380025 CCDC34Q96HJ3 373 aa28.44■■■□□ 2.14
NDEL1-202ENST00000380025 NEMFO60524 1076 aa28.43■■■□□ 2.14
NDEL1-202ENST00000380025 CHRNA5P30532 468 aa28.43■■■□□ 2.14
NDEL1-202ENST00000380025 SHMT1P34896 483 aa28.43■■■□□ 2.14
NDEL1-202ENST00000380025 NFIAQ12857 509 aa28.43■■■□□ 2.14
NDEL1-202ENST00000380025 IMPACTQ9P2X3 320 aa28.43■■■□□ 2.14
NDEL1-202ENST00000380025 GREB1LQ9C091 1923 aaPredicted RBP28.43■■■□□ 2.14
NDEL1-202ENST00000380025 AFMP43652 599 aa28.43■■■□□ 2.14
NDEL1-202ENST00000380025 E2F4Q16254 413 aa28.43■■■□□ 2.14
NDEL1-202ENST00000380025 HOMER1Q86YM7 354 aa28.43■■■□□ 2.14
NDEL1-202ENST00000380025 ZDHHC15Q96MV8 337 aa28.43■■■□□ 2.14
NDEL1-202ENST00000380025 C10orf71Q711Q0 1435 aa28.42■■■□□ 2.14
NDEL1-202ENST00000380025 NAPAP54920 295 aa28.42■■■□□ 2.14
NDEL1-202ENST00000380025 STRIP1Q5VSL9 837 aa28.42■■■□□ 2.14
NDEL1-202ENST00000380025 CLEC10AQ8IUN9 316 aa28.42■■■□□ 2.14
NDEL1-202ENST00000380025 FANCLQ9NW38 375 aa28.42■■■□□ 2.14
NDEL1-202ENST00000380025 ECE2O60344 883 aa28.41■■■□□ 2.14
NDEL1-202ENST00000380025 TPM2P07951 284 aa28.41■■■□□ 2.14
NDEL1-202ENST00000380025 SLC15A2Q16348 729 aa28.41■■■□□ 2.14
NDEL1-202ENST00000380025 INF2Q27J81 1249 aa28.41■■■□□ 2.14
NDEL1-202ENST00000380025 LRRC47Q8N1G4 583 aaKnown RBP28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms