RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 PABPC4Q13310 644 aaKnown RBP eCLIP5.59□□□□□ -1.51
C9orf72-203ENST00000380003 COG2Q14746 738 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 Q7L0L9 218 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 PLEKHH3Q7Z736 793 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 TRPV1Q8NER1 839 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 ZKSCAN3Q9BRR0 538 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 IVNS1ABPQ9Y6Y0 642 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 MYO9BQ13459 2157 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 MGAMO43451 1857 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 PFASO15067 1338 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 SMCHD1A6NHR9 2005 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 RNF113AO15541 343 aaKnown RBP5.59□□□□□ -1.52
C9orf72-203ENST00000380003 GNRH1P01148 92 aa5.59□□□□□ -1.52
C9orf72-203ENST00000380003 ZKSCAN1P17029 563 aaPredicted RBP5.59□□□□□ -1.52
C9orf72-203ENST00000380003 RASA1P20936 1047 aa5.59□□□□□ -1.52
C9orf72-203ENST00000380003 UBE3CQ15386 1083 aa5.59□□□□□ -1.52
C9orf72-203ENST00000380003 TMEM63BQ5T3F8 832 aa5.59□□□□□ -1.52
C9orf72-203ENST00000380003 KCTD1Q719H9 257 aa5.59□□□□□ -1.52
C9orf72-203ENST00000380003 ZNF589Q86UQ0 364 aaPredicted RBP5.59□□□□□ -1.52
C9orf72-203ENST00000380003 IFNL3Q8IZI9 196 aa5.59□□□□□ -1.52
C9orf72-203ENST00000380003 PXYLP1Q8TE99 480 aa5.59□□□□□ -1.52
C9orf72-203ENST00000380003 SPATC1LQ9H0A9 340 aa5.59□□□□□ -1.52
C9orf72-203ENST00000380003 EHD4Q9H223 541 aa5.59□□□□□ -1.52
C9orf72-203ENST00000380003 SLC45A1Q9Y2W3 748 aa5.59□□□□□ -1.52
C9orf72-203ENST00000380003 A0A0D9SFI3 127 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 F5H6K3 240 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 SLC34A2O95436 690 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 PGK1P00558 417 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 MCCP23508 829 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 KLRC3Q07444 240 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 TMEM179Q6ZVK1 233 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 EEPD1Q7L9B9 569 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 UBE2Q1Q7Z7E8 422 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 DDRGK1Q96HY6 314 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 RAVER2Q9HCJ3 691 aaKnown RBP5.58□□□□□ -1.52
C9orf72-203ENST00000380003 ATP8A2Q9NTI2 1148 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 MORF4L1Q9UBU8 362 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 RPTORQ8N122 1335 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 KCNA4P22459 653 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 SLC16A2P36021 539 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 TFAP4Q01664 338 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 IKQ13123 557 aaPredicted RBP5.58□□□□□ -1.52
C9orf72-203ENST00000380003 LRRC26Q2I0M4 334 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 DDX60LQ5H9U9 1706 aaKnown RBP5.58□□□□□ -1.52
C9orf72-203ENST00000380003 MORN1Q5T089 497 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 LBX2Q6XYB7 198 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 C16orf86Q6ZW13 317 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 APPBP2Q92624 585 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 IL25Q9H293 177 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 LAMB1P07942 1786 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 MYO15AQ9UKN7 3530 aa5.58□□□□□ -1.52
C9orf72-203ENST00000380003 RANBP6O60518 1105 aaKnown RBP5.57□□□□□ -1.52
C9orf72-203ENST00000380003 NDUFB10O96000 172 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 PTPREP23469 700 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 MAP2K5Q13163 448 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 IRF5Q13568 498 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 NAPBQ9H115 298 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 VCPKMTQ9H867 229 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 PRDM5Q9NQX1 630 aaPredicted RBP5.57□□□□□ -1.52
C9orf72-203ENST00000380003 TMX2Q9Y320 296 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 RABGAP1Q9Y3P9 1069 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 TSPY3P0CV98 308 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 TSPY8P0CW00 308 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 MAPK4P31152 587 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 RGS2P41220 211 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 USP14P54578 494 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 PDE1AP54750 535 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 PRMT2P55345 433 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 CWC27Q6UX04 472 aaKnown RBP5.57□□□□□ -1.52
C9orf72-203ENST00000380003 NECAB2Q7Z6G3 386 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 AMOTL1Q8IY63 956 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 ZNF444Q8N0Y2 327 aaPredicted RBP5.57□□□□□ -1.52
C9orf72-203ENST00000380003 NBPF3Q9H094 633 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 ARHGEF10LQ9HCE6 1279 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 USP34Q70CQ2 3546 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 FRMPD2Q68DX3 1309 aaPredicted RBP5.57□□□□□ -1.52
C9orf72-203ENST00000380003 FOCADQ5VW36 1801 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 VWA5AO00534 786 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 CNTN2Q02246 1040 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 SNRNP48Q6IEG0 339 aaKnown RBP5.57□□□□□ -1.52
C9orf72-203ENST00000380003 TTBK2Q6IQ55 1244 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 CCDC174Q6PII3 467 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.57□□□□□ -1.52
C9orf72-203ENST00000380003 USP6NLQ92738 828 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 GPATCH3Q96I76 525 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 AGBL1Q96MI9 1066 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 KANSL2Q9H9L4 492 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 IL17RBQ9NRM6 502 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 HOXC10Q9NYD6 342 aa5.57□□□□□ -1.52
C9orf72-203ENST00000380003 ZBTB47Q9UFB7 747 aaPredicted RBP5.57□□□□□ -1.52
C9orf72-203ENST00000380003 COL2A1P02458 1487 aaPredicted RBP5.56□□□□□ -1.52
C9orf72-203ENST00000380003 DMDP11532 3685 aa5.56□□□□□ -1.52
C9orf72-203ENST00000380003 MAST2Q6P0Q8 1798 aa5.56□□□□□ -1.52
C9orf72-203ENST00000380003 PLXNB2O15031 1838 aa5.56□□□□□ -1.52
C9orf72-203ENST00000380003 TMEM232C9JQI7 657 aa5.56□□□□□ -1.52
C9orf72-203ENST00000380003 ZBTB22O15209 634 aa5.56□□□□□ -1.52
C9orf72-203ENST00000380003 ADCY6O43306 1168 aa5.56□□□□□ -1.52
C9orf72-203ENST00000380003 GOLGA8HP0CJ92 632 aa5.56□□□□□ -1.52
C9orf72-203ENST00000380003 PPARAQ07869 468 aa5.56□□□□□ -1.52
C9orf72-203ENST00000380003 NMIQ13287 307 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms