RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 TADA3O75528 432 aa12.76□□□□□ -0.37
SMAD9-202ENST00000379826 COPB1P53618 953 aaKnown RBP12.76□□□□□ -0.37
SMAD9-202ENST00000379826 UBE3CQ15386 1083 aa12.76□□□□□ -0.37
SMAD9-202ENST00000379826 NBPF10Q6P3W6 841 aaKnown RBP12.76□□□□□ -0.37
SMAD9-202ENST00000379826 NBPF15Q8N660 670 aa12.76□□□□□ -0.37
SMAD9-202ENST00000379826 TRIML1Q8N9V2 468 aa12.76□□□□□ -0.37
SMAD9-202ENST00000379826 ENOX1Q8TC92 643 aaKnown RBP12.76□□□□□ -0.37
SMAD9-202ENST00000379826 LY9Q9HBG7 655 aa12.76□□□□□ -0.37
SMAD9-202ENST00000379826 NOP2P46087 812 aaKnown RBP12.75□□□□□ -0.37
SMAD9-202ENST00000379826 MNAT1P51948 309 aa12.75□□□□□ -0.37
SMAD9-202ENST00000379826 TMEM266Q2M3C6 531 aa12.75□□□□□ -0.37
SMAD9-202ENST00000379826 SECISBP2LQ93073 1101 aaKnown RBP12.75□□□□□ -0.37
SMAD9-202ENST00000379826 FERMT2Q96AC1 680 aa12.75□□□□□ -0.37
SMAD9-202ENST00000379826 FOXP1Q9H334 677 aaPredicted RBP12.75□□□□□ -0.37
SMAD9-202ENST00000379826 TCHHQ07283 1943 aa12.75□□□□□ -0.37
SMAD9-202ENST00000379826 COL15A1P39059 1388 aa12.75□□□□□ -0.37
SMAD9-202ENST00000379826 CYP2D7A0A087X1C5 515 aa12.75□□□□□ -0.37
SMAD9-202ENST00000379826 CCNT1O60563 726 aaKnown RBP12.75□□□□□ -0.37
SMAD9-202ENST00000379826 TYW1BQ6NUM6 668 aa12.75□□□□□ -0.37
SMAD9-202ENST00000379826 SAP30BPQ9UHR5 308 aaKnown RBP12.75□□□□□ -0.37
SMAD9-202ENST00000379826 ASAP1Q9ULH1 1129 aa12.75□□□□□ -0.37
SMAD9-202ENST00000379826 SAR1BQ9Y6B6 198 aa12.75□□□□□ -0.37
SMAD9-202ENST00000379826 CERS3Q8IU89 383 aa12.75□□□□□ -0.37
SMAD9-202ENST00000379826 MRPL44Q9H9J2 332 aaKnown RBP12.75□□□□□ -0.37
SMAD9-202ENST00000379826 RRP15Q9Y3B9 282 aaKnown RBP12.75□□□□□ -0.37
SMAD9-202ENST00000379826 TUBB2AQ13885 445 aa12.75□□□□□ -0.37
SMAD9-202ENST00000379826 TUBB2BQ9BVA1 445 aa12.75□□□□□ -0.37
SMAD9-202ENST00000379826 FHOD1Q9Y613 1164 aa12.75□□□□□ -0.37
SMAD9-202ENST00000379826 MROH5Q6ZUA9 1318 aa12.75□□□□□ -0.37
SMAD9-202ENST00000379826 SRGAP2O75044 1071 aa12.75□□□□□ -0.37
SMAD9-202ENST00000379826 PDE8BO95263 885 aa12.75□□□□□ -0.37
SMAD9-202ENST00000379826 GOLGA6BA6NDN3 693 aa12.74□□□□□ -0.37
SMAD9-202ENST00000379826 ZBTB7AO95365 584 aa12.74□□□□□ -0.37
SMAD9-202ENST00000379826 RPN1P04843 607 aaKnown RBP12.74□□□□□ -0.37
SMAD9-202ENST00000379826 MRPS25P82663 173 aaKnown RBP12.74□□□□□ -0.37
SMAD9-202ENST00000379826 TAX1BP1Q86VP1 789 aa12.74□□□□□ -0.37
SMAD9-202ENST00000379826 ERVV-2B6SEH9 535 aa12.74□□□□□ -0.37
SMAD9-202ENST00000379826 GYG1P46976 350 aa12.74□□□□□ -0.37
SMAD9-202ENST00000379826 GRIN1Q05586 938 aa12.74□□□□□ -0.37
SMAD9-202ENST00000379826 C2orf54Q08AI8 447 aa12.74□□□□□ -0.37
SMAD9-202ENST00000379826 RAD51AP2Q09MP3 1159 aa12.74□□□□□ -0.37
SMAD9-202ENST00000379826 SND1Q7KZF4 910 aaKnown RBP eCLIP12.74□□□□□ -0.37
SMAD9-202ENST00000379826 RASGRP4Q8TDF6 673 aa12.74□□□□□ -0.37
SMAD9-202ENST00000379826 SRPRBQ9Y5M8 271 aaKnown RBP12.74□□□□□ -0.37
SMAD9-202ENST00000379826 RICTORQ6R327 1708 aa12.74□□□□□ -0.37
SMAD9-202ENST00000379826 ATP8B1O43520 1251 aa12.74□□□□□ -0.37
SMAD9-202ENST00000379826 ARHGEF6Q15052 776 aa12.74□□□□□ -0.37
SMAD9-202ENST00000379826 IPO4Q8TEX9 1081 aaKnown RBP12.74□□□□□ -0.37
SMAD9-202ENST00000379826 SEC31BQ9NQW1 1179 aa12.74□□□□□ -0.37
SMAD9-202ENST00000379826 B4DLN1 442 aa12.74□□□□□ -0.37
SMAD9-202ENST00000379826 OPA1O60313 960 aa12.74□□□□□ -0.37
SMAD9-202ENST00000379826 TUBB4BP68371 445 aa12.74□□□□□ -0.37
SMAD9-202ENST00000379826 EN1Q05925 392 aaPredicted RBP12.74□□□□□ -0.37
SMAD9-202ENST00000379826 FAM182BQ5T319 152 aa12.74□□□□□ -0.37
SMAD9-202ENST00000379826 CRACR2BQ8N4Y2 399 aaPredicted RBP12.74□□□□□ -0.37
SMAD9-202ENST00000379826 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.74□□□□□ -0.37
SMAD9-202ENST00000379826 BICDL2A1A5D9 508 aa12.73□□□□□ -0.37
SMAD9-202ENST00000379826 EBAG9O00559 213 aa12.73□□□□□ -0.37
SMAD9-202ENST00000379826 MFAP3LO75121 409 aa12.73□□□□□ -0.37
SMAD9-202ENST00000379826 FGFR1OPO95684 399 aaKnown RBP12.73□□□□□ -0.37
SMAD9-202ENST00000379826 CYP2C19P33261 490 aa12.73□□□□□ -0.37
SMAD9-202ENST00000379826 KIF22Q14807 665 aa12.73□□□□□ -0.37
SMAD9-202ENST00000379826 HLFQ16534 295 aa12.73□□□□□ -0.37
SMAD9-202ENST00000379826 SPTY2D1Q68D10 685 aaPredicted RBP12.73□□□□□ -0.37
SMAD9-202ENST00000379826 GSPT2Q8IYD1 628 aaKnown RBP12.73□□□□□ -0.37
SMAD9-202ENST00000379826 CCDC113Q9H0I3 377 aa12.73□□□□□ -0.37
SMAD9-202ENST00000379826 FAM207AQ9NSI2 230 aaPredicted RBP12.73□□□□□ -0.37
SMAD9-202ENST00000379826 ADAM21Q9UKJ8 722 aa12.73□□□□□ -0.37
SMAD9-202ENST00000379826 PLA2G4AP47712 749 aa12.73□□□□□ -0.37
SMAD9-202ENST00000379826 CCDC51Q96ER9 411 aa12.73□□□□□ -0.37
SMAD9-202ENST00000379826 PANX2Q96RD6 677 aa12.73□□□□□ -0.37
SMAD9-202ENST00000379826 GRIN3BO60391 1043 aa12.73□□□□□ -0.37
SMAD9-202ENST00000379826 PLEKHA8P1O95397 391 aa12.73□□□□□ -0.37
SMAD9-202ENST00000379826 ERCC5P28715 1186 aaPredicted RBP12.73□□□□□ -0.37
SMAD9-202ENST00000379826 DYMQ7RTS9 669 aa12.73□□□□□ -0.37
SMAD9-202ENST00000379826 SOS2Q07890 1332 aaPredicted RBP12.73□□□□□ -0.37
SMAD9-202ENST00000379826 RNF40O75150 1001 aa12.73□□□□□ -0.37
SMAD9-202ENST00000379826 DYNLL1P63167 89 aaKnown RBP12.73□□□□□ -0.37
SMAD9-202ENST00000379826 CCDC24Q8N4L8 307 aa12.73□□□□□ -0.37
SMAD9-202ENST00000379826 EPN1Q9Y6I3 576 aaPredicted RBP12.73□□□□□ -0.37
SMAD9-202ENST00000379826 FAM205CA6NFA0 338 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 CALML3P27482 149 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 IFFO1Q0D2I5 559 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 PRPF4BQ13523 1007 aaKnown RBP12.72□□□□□ -0.37
SMAD9-202ENST00000379826 KRT31Q15323 416 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 TMEM132AQ24JP5 1023 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 TCERG1LQ5VWI1 586 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 ATRIPQ8WXE1 791 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 ERLIN2O94905 339 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 ACTN2P35609 894 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 USP8P40818 1118 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 CUL4BQ13620 913 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 REXO1L1PQ8IX06 675 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 TSGA10Q9BZW7 698 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 ZNF446Q9NWS9 450 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 CASP8Q14790 479 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.72□□□□□ -0.37
SMAD9-202ENST00000379826 STRBPQ96SI9 672 aaKnown RBP12.72□□□□□ -0.37
SMAD9-202ENST00000379826 HDAC6Q9UBN7 1215 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 SPATA31A6Q5VVP1 1343 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms