RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 GMCL1Q96IK5 515 aa28.54■■■□□ 2.16
TM6SF1-204ENST00000379390 CCL15-CCL14A0A0B4J2E2 113 aa28.53■■■□□ 2.16
TM6SF1-204ENST00000379390 GOLGA8AA7E2F4 631 aa28.53■■■□□ 2.16
TM6SF1-204ENST00000379390 MOGSQ13724 837 aa28.53■■■□□ 2.16
TM6SF1-204ENST00000379390 GRM4Q14833 912 aa28.53■■■□□ 2.16
TM6SF1-204ENST00000379390 CCL15Q16663 113 aa28.53■■■□□ 2.16
TM6SF1-204ENST00000379390 TREML2Q5T2D2 321 aa28.53■■■□□ 2.16
TM6SF1-204ENST00000379390 DCAF4Q8WV16 495 aa28.53■■■□□ 2.16
TM6SF1-204ENST00000379390 ZNF274Q96GC6 653 aaPredicted RBP28.53■■■□□ 2.16
TM6SF1-204ENST00000379390 CAPNS2Q96L46 248 aa28.53■■■□□ 2.16
TM6SF1-204ENST00000379390 CALM1P0DP23 149 aa28.52■■■□□ 2.16
TM6SF1-204ENST00000379390 CALM2P0DP24 149 aa28.52■■■□□ 2.16
TM6SF1-204ENST00000379390 CALM3P0DP25 149 aa28.52■■■□□ 2.16
TM6SF1-204ENST00000379390 CETPP11597 493 aa28.52■■■□□ 2.16
TM6SF1-204ENST00000379390 METAP2P50579 478 aaKnown RBP eCLIP28.52■■■□□ 2.16
TM6SF1-204ENST00000379390 CCT2P78371 535 aaKnown RBP28.52■■■□□ 2.16
TM6SF1-204ENST00000379390 PROCA1Q8NCQ7 364 aaPredicted RBP28.52■■■□□ 2.16
TM6SF1-204ENST00000379390 RPAP3Q9H6T3 665 aaPredicted RBP28.52■■■□□ 2.16
TM6SF1-204ENST00000379390 NCOA5Q9HCD5 579 aaKnown RBP28.52■■■□□ 2.16
TM6SF1-204ENST00000379390 GPCPD1Q9NPB8 672 aa28.52■■■□□ 2.16
TM6SF1-204ENST00000379390 COL11A1P12107 1806 aaPredicted RBP28.52■■■□□ 2.16
TM6SF1-204ENST00000379390 WDR46O15213 610 aaKnown RBP28.51■■■□□ 2.15
TM6SF1-204ENST00000379390 PARP1P09874 1014 aaKnown RBP28.51■■■□□ 2.15
TM6SF1-204ENST00000379390 BMP3P12645 472 aa28.51■■■□□ 2.15
TM6SF1-204ENST00000379390 ZNF543Q08ER8 600 aa28.51■■■□□ 2.15
TM6SF1-204ENST00000379390 STAG2Q8N3U4 1231 aa28.51■■■□□ 2.15
TM6SF1-204ENST00000379390 CTCFLQ8NI51 663 aaPredicted RBP28.51■■■□□ 2.15
TM6SF1-204ENST00000379390 BRI3BPQ8WY22 251 aa28.51■■■□□ 2.15
TM6SF1-204ENST00000379390 TANGO6Q9C0B7 1094 aa28.51■■■□□ 2.15
TM6SF1-204ENST00000379390 MAD2L2Q9UI95 211 aa28.51■■■□□ 2.15
TM6SF1-204ENST00000379390 HSPA6P17066 643 aa28.51■■■□□ 2.15
TM6SF1-204ENST00000379390 RTN1Q16799 776 aa28.51■■■□□ 2.15
TM6SF1-204ENST00000379390 FANCBQ8NB91 859 aa28.51■■■□□ 2.15
TM6SF1-204ENST00000379390 ZIC5Q96T25 663 aa28.51■■■□□ 2.15
TM6SF1-204ENST00000379390 NID2Q14112 1375 aa28.5■■■□□ 2.15
TM6SF1-204ENST00000379390 MCM2P49736 904 aa28.5■■■□□ 2.15
TM6SF1-204ENST00000379390 RCAN1P53805 252 aa28.5■■■□□ 2.15
TM6SF1-204ENST00000379390 ASPRV1Q53RT3 343 aa28.5■■■□□ 2.15
TM6SF1-204ENST00000379390 FASTKD5Q7L8L6 764 aaKnown RBP28.5■■■□□ 2.15
TM6SF1-204ENST00000379390 NECAB1Q8N987 351 aa28.5■■■□□ 2.15
TM6SF1-204ENST00000379390 SLKQ9H2G2 1235 aaPredicted RBP28.5■■■□□ 2.15
TM6SF1-204ENST00000379390 CDC27P30260 824 aa28.49■■■□□ 2.15
TM6SF1-204ENST00000379390 TTBK2Q6IQ55 1244 aa28.49■■■□□ 2.15
TM6SF1-204ENST00000379390 MAP3K14Q99558 947 aa28.49■■■□□ 2.15
TM6SF1-204ENST00000379390 CPVLQ9H3G5 476 aa28.49■■■□□ 2.15
TM6SF1-204ENST00000379390 AGTPBP1Q9UPW5 1226 aa28.49■■■□□ 2.15
TM6SF1-204ENST00000379390 MANSC4A6NHS7 340 aaPredicted RBP28.48■■■□□ 2.15
TM6SF1-204ENST00000379390 TMEM232C9JQI7 657 aa28.48■■■□□ 2.15
TM6SF1-204ENST00000379390 AOC2O75106 756 aa28.48■■■□□ 2.15
TM6SF1-204ENST00000379390 KIF5BP33176 963 aa28.48■■■□□ 2.15
TM6SF1-204ENST00000379390 GPATCH4Q5T3I0 446 aaKnown RBP28.48■■■□□ 2.15
TM6SF1-204ENST00000379390 SAMD1Q6SPF0 538 aaPredicted RBP28.48■■■□□ 2.15
TM6SF1-204ENST00000379390 FAM217BQ9NTX9 383 aaPredicted RBP28.48■■■□□ 2.15
TM6SF1-204ENST00000379390 PALM3A6NDB9 673 aaPredicted RBP28.47■■■□□ 2.15
TM6SF1-204ENST00000379390 PFKFB2O60825 505 aa28.47■■■□□ 2.15
TM6SF1-204ENST00000379390 SCRN1Q12765 414 aa28.47■■■□□ 2.15
TM6SF1-204ENST00000379390 IKQ13123 557 aaPredicted RBP28.47■■■□□ 2.15
TM6SF1-204ENST00000379390 GPAT2Q6NUI2 795 aa28.47■■■□□ 2.15
TM6SF1-204ENST00000379390 CMTR1Q8N1G2 835 aaKnown RBP28.47■■■□□ 2.15
TM6SF1-204ENST00000379390 SNX21Q969T3 373 aa28.47■■■□□ 2.15
TM6SF1-204ENST00000379390 TMX3Q96JJ7 454 aa28.47■■■□□ 2.15
TM6SF1-204ENST00000379390 FBXO28Q9NVF7 368 aa28.47■■■□□ 2.15
TM6SF1-204ENST00000379390 KLRF2D3W0D1 207 aa28.47■■■□□ 2.15
TM6SF1-204ENST00000379390 PLEKHA8P1O95397 391 aa28.47■■■□□ 2.15
TM6SF1-204ENST00000379390 ADD1P35611 737 aaKnown RBP28.47■■■□□ 2.15
TM6SF1-204ENST00000379390 SLC16A2P36021 539 aa28.47■■■□□ 2.15
TM6SF1-204ENST00000379390 NOGQ13253 232 aa28.47■■■□□ 2.15
TM6SF1-204ENST00000379390 ZSCAN31Q96LW9 406 aaPredicted RBP28.47■■■□□ 2.15
TM6SF1-204ENST00000379390 CEP350Q5VT06 3117 aa28.47■■■□□ 2.15
TM6SF1-204ENST00000379390 PCNTO95613 3336 aa28.47■■■□□ 2.15
TM6SF1-204ENST00000379390 BTBD19C9JJ37 291 aa28.46■■■□□ 2.15
TM6SF1-204ENST00000379390 VEGFBP49765 207 aa28.46■■■□□ 2.15
TM6SF1-204ENST00000379390 STAT2P52630 851 aa28.46■■■□□ 2.15
TM6SF1-204ENST00000379390 ST3GAL1Q11201 340 aa28.46■■■□□ 2.15
TM6SF1-204ENST00000379390 HSCBQ8IWL3 235 aa28.46■■■□□ 2.15
TM6SF1-204ENST00000379390 GTF3C6Q969F1 213 aa28.46■■■□□ 2.15
TM6SF1-204ENST00000379390 PTPN18Q99952 460 aa28.46■■■□□ 2.15
TM6SF1-204ENST00000379390 UBA5Q9GZZ9 404 aa28.46■■■□□ 2.15
TM6SF1-204ENST00000379390 SH2B1Q9NRF2 756 aaPredicted RBP28.46■■■□□ 2.15
TM6SF1-204ENST00000379390 WDR33Q9C0J8 1336 aaKnown RBP28.46■■■□□ 2.15
TM6SF1-204ENST00000379390 THSD7BQ9C0I4 1608 aa28.45■■■□□ 2.15
TM6SF1-204ENST00000379390 FLOT1O75955 427 aa28.45■■■□□ 2.14
TM6SF1-204ENST00000379390 KIF23Q02241 960 aaPredicted RBP28.45■■■□□ 2.14
TM6SF1-204ENST00000379390 NBPF11Q86T75 865 aa28.45■■■□□ 2.14
TM6SF1-204ENST00000379390 RBM28Q9NW13 759 aaKnown RBP28.45■■■□□ 2.14
TM6SF1-204ENST00000379390 USP17L15C9J2P7 530 aa28.44■■■□□ 2.14
TM6SF1-204ENST00000379390 USP17L13C9JLJ4 530 aa28.44■■■□□ 2.14
TM6SF1-204ENST00000379390 USP17L11C9JVI0 530 aa28.44■■■□□ 2.14
TM6SF1-204ENST00000379390 USP17L18D6R9N7 530 aa28.44■■■□□ 2.14
TM6SF1-204ENST00000379390 USP17L22D6RA61 530 aa28.44■■■□□ 2.14
TM6SF1-204ENST00000379390 USP17L17D6RBQ6 530 aa28.44■■■□□ 2.14
TM6SF1-204ENST00000379390 USP17L19D6RCP7 530 aa28.44■■■□□ 2.14
TM6SF1-204ENST00000379390 USP17L20D6RJB6 530 aa28.44■■■□□ 2.14
TM6SF1-204ENST00000379390 DTNBO60941 627 aa28.44■■■□□ 2.14
TM6SF1-204ENST00000379390 USP17L24Q0WX57 530 aa28.44■■■□□ 2.14
TM6SF1-204ENST00000379390 TMTC3Q6ZXV5 915 aa28.44■■■□□ 2.14
TM6SF1-204ENST00000379390 CCDC83Q8IWF9 413 aa28.44■■■□□ 2.14
TM6SF1-204ENST00000379390 FAM43AQ8N2R8 423 aa28.44■■■□□ 2.14
TM6SF1-204ENST00000379390 CCDC82Q8N4S0 544 aa28.44■■■□□ 2.14
TM6SF1-204ENST00000379390 TESPA1A2RU30 521 aaPredicted RBP28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms