RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 A0A1W2PQJ5 194 aa9.21□□□□□ -0.94
PTPRR-203ENST00000378778 ERICH2A1L162 156 aa9.21□□□□□ -0.94
PTPRR-203ENST00000378778 LGALS16A8MUM7 142 aa9.21□□□□□ -0.94
PTPRR-203ENST00000378778 BTBD18B2RXH4 712 aa9.21□□□□□ -0.94
PTPRR-203ENST00000378778 PATL2C9JE40 543 aaKnown RBP9.21□□□□□ -0.94
PTPRR-203ENST00000378778 KIAA0754O94854 1291 aa9.21□□□□□ -0.94
PTPRR-203ENST00000378778 DNM2P50570 870 aa9.21□□□□□ -0.94
PTPRR-203ENST00000378778 MICU3Q86XE3 530 aa9.21□□□□□ -0.94
PTPRR-203ENST00000378778 TBC1D10CQ8IV04 446 aa9.21□□□□□ -0.94
PTPRR-203ENST00000378778 CCDC50Q8IVM0 306 aa9.21□□□□□ -0.94
PTPRR-203ENST00000378778 TRIM58Q8NG06 486 aa9.21□□□□□ -0.94
PTPRR-203ENST00000378778 PHKBQ93100 1093 aa9.21□□□□□ -0.94
PTPRR-203ENST00000378778 CABS1Q96KC9 395 aa9.21□□□□□ -0.94
PTPRR-203ENST00000378778 AIFM3Q96NN9 605 aa9.21□□□□□ -0.94
PTPRR-203ENST00000378778 ALS2Q96Q42 1657 aa9.21□□□□□ -0.94
PTPRR-203ENST00000378778 KCNJ18B7U540 433 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 IFIT3O14879 490 aaKnown RBP9.2□□□□□ -0.94
PTPRR-203ENST00000378778 CLGNO14967 610 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 TCP1P17987 556 aaKnown RBP9.2□□□□□ -0.94
PTPRR-203ENST00000378778 GGCXP38435 758 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 NT5C2P49902 561 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 KCNJ12Q14500 433 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 KCNB1Q14721 858 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 LRRC24Q50LG9 513 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 CD302Q8IX05 232 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 CERKQ8TCT0 537 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 JAKMIP2Q96AA8 810 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 RNF25Q96BH1 459 aaPredicted RBP9.2□□□□□ -0.94
PTPRR-203ENST00000378778 SUGCTQ9HAC7 445 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 MAGEF1Q9HAY2 307 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 DLEC1Q9Y238 1755 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 PDS5AQ29RF7 1337 aaKnown RBP9.2□□□□□ -0.94
PTPRR-203ENST00000378778 FER1L4A9Z1Z3 1794 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 COL18A1P39060 1754 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 AGPSO00116 658 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 CSF1RP07333 972 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 PCP11498 1178 aaKnown RBP9.2□□□□□ -0.94
PTPRR-203ENST00000378778 HNRNPH1P31943 449 aaKnown RBP9.2□□□□□ -0.94
PTPRR-203ENST00000378778 KRT2P35908 639 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 MAP2K2P36507 400 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 ZAP70P43403 619 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 CCDC122Q5T0U0 273 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 AKNAD1Q5T1N1 836 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 ARL6IP4Q66PJ3 421 aaKnown RBP9.2□□□□□ -0.94
PTPRR-203ENST00000378778 FAM114A1Q8IWE2 563 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 MREGQ8N565 214 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 CPLX3Q8WVH0 158 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 DRC1Q96MC2 740 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 RUFY1Q96T51 708 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 ISCA1Q9BUE6 129 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 RBM28Q9NW13 759 aaKnown RBP9.2□□□□□ -0.94
PTPRR-203ENST00000378778 SOS2Q07890 1332 aaPredicted RBP9.2□□□□□ -0.94
PTPRR-203ENST00000378778 BCORQ6W2J9 1755 aa9.2□□□□□ -0.94
PTPRR-203ENST00000378778 ATP5J2-PTCD1G3V325 749 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 C21orf2O43822 256 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 USO1O60763 962 aaKnown RBP9.19□□□□□ -0.94
PTPRR-203ENST00000378778 HSF2BPO75031 334 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 PTCD1O75127 700 aaKnown RBP9.19□□□□□ -0.94
PTPRR-203ENST00000378778 PCCAP05165 728 aaPredicted RBP9.19□□□□□ -0.94
PTPRR-203ENST00000378778 CALM1P0DP23 149 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 CALM2P0DP24 149 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 CALM3P0DP25 149 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 CD44P16070 742 aaKnown RBP9.19□□□□□ -0.94
PTPRR-203ENST00000378778 ARID4AP29374 1257 aaPredicted RBP9.19□□□□□ -0.94
PTPRR-203ENST00000378778 NCAPH2Q6IBW4 605 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 MB21D1Q8N884 522 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 MAGEC3Q8TD91 643 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 P3H4Q92791 437 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 MMS19Q96T76 1030 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 SLF1Q9BQI6 1058 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 KAT14Q9H8E8 782 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 DONSONQ9NYP3 566 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 PCDHB6Q9Y5E3 794 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 PPFIA3O75145 1194 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 PHACTR2O75167 634 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 TACC1O75410 805 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 ZBED6P86452 979 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 SLC39A6Q13433 755 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 WTAPQ15007 396 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 ZNF827Q17R98 1081 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 KDM7AQ6ZMT4 941 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 KIAA1328Q86T90 577 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 CAGE1Q8TC20 777 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 BCAS4Q8TDM0 211 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 STRBPQ96SI9 672 aaKnown RBP9.19□□□□□ -0.94
PTPRR-203ENST00000378778 NACAP1Q9BZK3 213 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 CTNND2Q9UQB3 1225 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 REXO2Q9Y3B8 237 aaKnown RBP9.19□□□□□ -0.94
PTPRR-203ENST00000378778 PNPLA7Q6ZV29 1317 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 MYH3P11055 1940 aa9.19□□□□□ -0.94
PTPRR-203ENST00000378778 B4E1Z4 1266 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 PRPF3O43395 683 aaKnown RBP9.18□□□□□ -0.94
PTPRR-203ENST00000378778 CCDC172P0C7W6 258 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 HNRNPH3P31942 346 aaKnown RBP9.18□□□□□ -0.94
PTPRR-203ENST00000378778 CCT5P48643 541 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 ATP2C1P98194 919 aaPredicted RBP9.18□□□□□ -0.94
PTPRR-203ENST00000378778 E2F4Q16254 413 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 RRAGBQ5VZM2 374 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 WWC2Q6AWC2 1192 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 ZNF507Q8TCN5 953 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms