RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 USP17L10C9JJH3 530 aa18.35■□□□□ 0.53
CCDC107-204ENST00000378409 SNHG28P0DPA3 235 aa18.35■□□□□ 0.53
CCDC107-204ENST00000378409 SLC1A4P43007 532 aa18.35■□□□□ 0.53
CCDC107-204ENST00000378409 GNAQP50148 359 aa18.35■□□□□ 0.53
CCDC107-204ENST00000378409 ZNF543Q08ER8 600 aa18.35■□□□□ 0.53
CCDC107-204ENST00000378409 MTMR2Q13614 643 aa18.35■□□□□ 0.53
CCDC107-204ENST00000378409 NTRK3Q16288 839 aa18.35■□□□□ 0.53
CCDC107-204ENST00000378409 CCDC82Q8N4S0 544 aa18.35■□□□□ 0.53
CCDC107-204ENST00000378409 DDX11Q96FC9 970 aa18.35■□□□□ 0.53
CCDC107-204ENST00000378409 KIAA1683Q9H0B3 1180 aa18.35■□□□□ 0.53
CCDC107-204ENST00000378409 GPCPD1Q9NPB8 672 aa18.35■□□□□ 0.53
CCDC107-204ENST00000378409 PARP14Q460N5 1801 aa18.35■□□□□ 0.53
CCDC107-204ENST00000378409 KLRF2D3W0D1 207 aa18.34■□□□□ 0.53
CCDC107-204ENST00000378409 TOMM70O94826 608 aa18.34■□□□□ 0.53
CCDC107-204ENST00000378409 IFNAR1P17181 557 aa18.34■□□□□ 0.53
CCDC107-204ENST00000378409 GJB2P29033 226 aa18.34■□□□□ 0.53
CCDC107-204ENST00000378409 KIAA1755Q5JYT7 1200 aa18.34■□□□□ 0.53
CCDC107-204ENST00000378409 CST9Q5W186 159 aa18.34■□□□□ 0.53
CCDC107-204ENST00000378409 KCTD1Q719H9 257 aa18.34■□□□□ 0.53
CCDC107-204ENST00000378409 ERO1BQ86YB8 467 aa18.34■□□□□ 0.53
CCDC107-204ENST00000378409 SMARCC2Q8TAQ2 1214 aa18.34■□□□□ 0.53
CCDC107-204ENST00000378409 RBM46Q8TBY0 533 aaKnown RBP18.34■□□□□ 0.53
CCDC107-204ENST00000378409 CNKSR2Q8WXI2 1034 aa18.34■□□□□ 0.53
CCDC107-204ENST00000378409 PHKBQ93100 1093 aa18.34■□□□□ 0.53
CCDC107-204ENST00000378409 OTUD5Q96G74 571 aa18.34■□□□□ 0.53
CCDC107-204ENST00000378409 GMCL1Q96IK5 515 aa18.34■□□□□ 0.53
CCDC107-204ENST00000378409 NUP88Q99567 741 aaPredicted RBP18.34■□□□□ 0.53
CCDC107-204ENST00000378409 AFG3L2Q9Y4W6 797 aa18.34■□□□□ 0.53
CCDC107-204ENST00000378409 LOC285556D6RIA3 1793 aa18.34■□□□□ 0.53
CCDC107-204ENST00000378409 PASKQ96RG2 1323 aa18.33■□□□□ 0.53
CCDC107-204ENST00000378409 SPDYE5A6NIY4 337 aa18.33■□□□□ 0.52
CCDC107-204ENST00000378409 UNCXA6NJT0 531 aa18.33■□□□□ 0.52
CCDC107-204ENST00000378409 BMP3P12645 472 aa18.33■□□□□ 0.52
CCDC107-204ENST00000378409 USP14P54578 494 aa18.33■□□□□ 0.52
CCDC107-204ENST00000378409 HMGN5P82970 282 aaKnown RBP18.33■□□□□ 0.52
CCDC107-204ENST00000378409 PPATQ06203 517 aa18.33■□□□□ 0.52
CCDC107-204ENST00000378409 SSRP1Q08945 709 aaKnown RBP18.33■□□□□ 0.52
CCDC107-204ENST00000378409 GPATCH4Q5T3I0 446 aaKnown RBP18.33■□□□□ 0.52
CCDC107-204ENST00000378409 SRBD1Q8N5C6 995 aaKnown RBP18.33■□□□□ 0.52
CCDC107-204ENST00000378409 SLC10A4Q96EP9 437 aa18.33■□□□□ 0.52
CCDC107-204ENST00000378409 LZTS2Q9BRK4 669 aa18.33■□□□□ 0.52
CCDC107-204ENST00000378409 SLC26A6Q9BXS9 759 aa18.33■□□□□ 0.52
CCDC107-204ENST00000378409 CNTNAP5Q8WYK1 1306 aa18.32■□□□□ 0.52
CCDC107-204ENST00000378409 BACE1P56817 501 aa18.32■□□□□ 0.52
CCDC107-204ENST00000378409 DGKZQ13574 1117 aa18.32■□□□□ 0.52
CCDC107-204ENST00000378409 FAM83BQ5T0W9 1011 aa18.32■□□□□ 0.52
CCDC107-204ENST00000378409 NBPF11Q86T75 865 aa18.32■□□□□ 0.52
CCDC107-204ENST00000378409 TRIM22Q8IYM9 498 aa18.32■□□□□ 0.52
CCDC107-204ENST00000378409 LPAR1Q92633 364 aa18.32■□□□□ 0.52
CCDC107-204ENST00000378409 OPTNQ96CV9 577 aa18.32■□□□□ 0.52
CCDC107-204ENST00000378409 CPVLQ9H3G5 476 aa18.32■□□□□ 0.52
CCDC107-204ENST00000378409 CWC22Q9HCG8 908 aaKnown RBP18.32■□□□□ 0.52
CCDC107-204ENST00000378409 ORC3Q9UBD5 711 aaPredicted RBP18.32■□□□□ 0.52
CCDC107-204ENST00000378409 STK36Q9NRP7 1315 aa18.31■□□□□ 0.52
CCDC107-204ENST00000378409 C19orf81C9J6K1 198 aa18.31■□□□□ 0.52
CCDC107-204ENST00000378409 FMNL1O95466 1100 aaPredicted RBP18.31■□□□□ 0.52
CCDC107-204ENST00000378409 HMGCS2P54868 508 aa18.31■□□□□ 0.52
CCDC107-204ENST00000378409 AKAP17AQ02040 695 aaKnown RBP18.31■□□□□ 0.52
CCDC107-204ENST00000378409 FUT2Q10981 343 aa18.31■□□□□ 0.52
CCDC107-204ENST00000378409 IKQ13123 557 aaPredicted RBP18.31■□□□□ 0.52
CCDC107-204ENST00000378409 PPIL2Q13356 520 aa18.31■□□□□ 0.52
CCDC107-204ENST00000378409 TTBK2Q6IQ55 1244 aa18.31■□□□□ 0.52
CCDC107-204ENST00000378409 FAM184AQ8NB25 1140 aa18.31■□□□□ 0.52
CCDC107-204ENST00000378409 UBA5Q9GZZ9 404 aa18.31■□□□□ 0.52
CCDC107-204ENST00000378409 EMILIN3Q9NT22 766 aa18.31■□□□□ 0.52
CCDC107-204ENST00000378409 TMEM232C9JQI7 657 aa18.3■□□□□ 0.52
CCDC107-204ENST00000378409 HUNKP57058 714 aa18.3■□□□□ 0.52
CCDC107-204ENST00000378409 PIBF1Q8WXW3 757 aa18.3■□□□□ 0.52
CCDC107-204ENST00000378409 SPZ1Q9BXG8 430 aa18.3■□□□□ 0.52
CCDC107-204ENST00000378409 RNF26Q9BY78 433 aaPredicted RBP18.3■□□□□ 0.52
CCDC107-204ENST00000378409 TMOD4Q9NZQ9 345 aa18.3■□□□□ 0.52
CCDC107-204ENST00000378409 KIF3AQ9Y496 699 aa18.3■□□□□ 0.52
CCDC107-204ENST00000378409 COL11A1P12107 1806 aaPredicted RBP18.29■□□□□ 0.52
CCDC107-204ENST00000378409 hCG_1642624A0A1W2PR95 340 aa18.29■□□□□ 0.52
CCDC107-204ENST00000378409 IRF6O14896 467 aa18.29■□□□□ 0.52
CCDC107-204ENST00000378409 WDR46O15213 610 aaKnown RBP18.29■□□□□ 0.52
CCDC107-204ENST00000378409 FDPSP14324 419 aaKnown RBP18.29■□□□□ 0.52
CCDC107-204ENST00000378409 VCAM1P19320 739 aa18.29■□□□□ 0.52
CCDC107-204ENST00000378409 SLC16A2P36021 539 aa18.29■□□□□ 0.52
CCDC107-204ENST00000378409 SLC35G1Q2M3R5 365 aa18.29■□□□□ 0.52
CCDC107-204ENST00000378409 C12orf42Q96LP6 360 aa18.29■□□□□ 0.52
CCDC107-204ENST00000378409 VAT1LQ9HCJ6 419 aa18.29■□□□□ 0.52
CCDC107-204ENST00000378409 V9GY48 417 aaPredicted RBP18.29■□□□□ 0.52
CCDC107-204ENST00000378409 RLFQ13129 1914 aa18.28■□□□□ 0.52
CCDC107-204ENST00000378409 CXCL11O14625 94 aa18.28■□□□□ 0.52
CCDC107-204ENST00000378409 PRPF3O43395 683 aaKnown RBP18.28■□□□□ 0.52
CCDC107-204ENST00000378409 CYTH3O43739 400 aa18.28■□□□□ 0.52
CCDC107-204ENST00000378409 SMARCA1P28370 1054 aa18.28■□□□□ 0.52
CCDC107-204ENST00000378409 GJA5P36382 358 aa18.28■□□□□ 0.52
CCDC107-204ENST00000378409 FOSBP53539 338 aa18.28■□□□□ 0.52
CCDC107-204ENST00000378409 FSTL1Q12841 308 aa18.28■□□□□ 0.52
CCDC107-204ENST00000378409 SH3D19Q5HYK7 790 aa18.28■□□□□ 0.52
CCDC107-204ENST00000378409 WNK4Q96J92 1243 aa18.28■□□□□ 0.52
CCDC107-204ENST00000378409 TANGO6Q9C0B7 1094 aa18.28■□□□□ 0.52
CCDC107-204ENST00000378409 RPAP3Q9H6T3 665 aaPredicted RBP18.28■□□□□ 0.52
CCDC107-204ENST00000378409 KCNH4Q9UQ05 1017 aa18.28■□□□□ 0.52
CCDC107-204ENST00000378409 DEXIO95424 95 aa18.27■□□□□ 0.52
CCDC107-204ENST00000378409 STAT2P52630 851 aa18.27■□□□□ 0.52
CCDC107-204ENST00000378409 SYDE2Q5VT97 1194 aa18.27■□□□□ 0.52
CCDC107-204ENST00000378409 HOMER1Q86YM7 354 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms