RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 SELENOOQ9BVL4 669 aa13.01□□□□□ -0.33
NPHP4-202ENST00000378161 PPP1R37O75864 691 aa13.01□□□□□ -0.33
NPHP4-202ENST00000378161 PAK2Q13177 524 aa13.01□□□□□ -0.33
NPHP4-202ENST00000378161 NAA35Q5VZE5 725 aa13.01□□□□□ -0.33
NPHP4-202ENST00000378161 MIER3Q7Z3K6 550 aa13.01□□□□□ -0.33
NPHP4-202ENST00000378161 LINS1Q8NG48 757 aa13.01□□□□□ -0.33
NPHP4-202ENST00000378161 SNX14Q9Y5W7 946 aa13.01□□□□□ -0.33
NPHP4-202ENST00000378161 MAP3K19Q56UN5 1328 aa13.01□□□□□ -0.33
NPHP4-202ENST00000378161 SSH2Q76I76 1423 aa13.01□□□□□ -0.33
NPHP4-202ENST00000378161 MLH1P40692 756 aa13□□□□□ -0.33
NPHP4-202ENST00000378161 SF3A3Q12874 501 aaKnown RBP eCLIP13□□□□□ -0.33
NPHP4-202ENST00000378161 RCN1Q15293 331 aa13□□□□□ -0.33
NPHP4-202ENST00000378161 FKBP15Q5T1M5 1219 aa13□□□□□ -0.33
NPHP4-202ENST00000378161 WDR24Q96S15 920 aa13□□□□□ -0.33
NPHP4-202ENST00000378161 FUCA2Q9BTY2 467 aa13□□□□□ -0.33
NPHP4-202ENST00000378161 SLC39A2Q9NP94 309 aa13□□□□□ -0.33
NPHP4-202ENST00000378161 DLGAP2Q9P1A6 1054 aa13□□□□□ -0.33
NPHP4-202ENST00000378161 PCDHGA4Q9Y5G9 962 aa13□□□□□ -0.33
NPHP4-202ENST00000378161 USO1O60763 962 aaKnown RBP13□□□□□ -0.33
NPHP4-202ENST00000378161 ZMYND10O75800 440 aa13□□□□□ -0.33
NPHP4-202ENST00000378161 STMN2Q93045 179 aa13□□□□□ -0.33
NPHP4-202ENST00000378161 ADCY1Q08828 1119 aa13□□□□□ -0.33
NPHP4-202ENST00000378161 NMIQ13287 307 aaPredicted RBP13□□□□□ -0.33
NPHP4-202ENST00000378161 SPA17Q15506 151 aa13□□□□□ -0.33
NPHP4-202ENST00000378161 RSRC2Q7L4I2 434 aaKnown RBP13□□□□□ -0.33
NPHP4-202ENST00000378161 BHMTQ93088 406 aa13□□□□□ -0.33
NPHP4-202ENST00000378161 ATXN10Q9UBB4 475 aa13□□□□□ -0.33
NPHP4-202ENST00000378161 ATP8A1Q9Y2Q0 1164 aa13□□□□□ -0.33
NPHP4-202ENST00000378161 SAR1BQ9Y6B6 198 aa13□□□□□ -0.33
NPHP4-202ENST00000378161 LRRIQ1Q96JM4 1722 aa13□□□□□ -0.33
NPHP4-202ENST00000378161 PNMA6EA0A0J9YXQ4 647 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 GNAT2P19087 354 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 ARPC4P59998 168 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 C6orf163Q5TEZ5 329 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 DZIP3Q86Y13 1208 aaKnown RBP12.99□□□□□ -0.33
NPHP4-202ENST00000378161 SMC1BQ8NDV3 1235 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 SPATA17Q96L03 361 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 FBXO9Q9UK97 447 aaPredicted RBP12.99□□□□□ -0.33
NPHP4-202ENST00000378161 HPCAL4Q9UM19 191 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 RABGAP1Q9Y3P9 1069 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 MAP3K5Q99683 1374 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 CROCC2H7BZ55 1655 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 P4HA2O15460 535 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 KRT86O43790 486 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 CDC25CP30307 473 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 CCDC15Q0P6D6 951 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 CBX3Q13185 183 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 CDC37Q16543 378 aaPredicted RBP12.99□□□□□ -0.33
NPHP4-202ENST00000378161 LONP2Q86WA8 852 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 GALNT15Q8N3T1 639 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 ZNF280CQ8ND82 737 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 TARSL2A2RTX5 802 aaKnown RBP12.99□□□□□ -0.33
NPHP4-202ENST00000378161 LIN7AO14910 233 aaPredicted RBP12.99□□□□□ -0.33
NPHP4-202ENST00000378161 TACC1O75410 805 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 ATP6V1G2O95670 118 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 IFT20Q8IY31 132 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 SLC35F6Q8N357 371 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 CASP10Q92851 521 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 DKK3Q9UBP4 350 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 RASAL2Q9UJF2 1139 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 ZNF148Q9UQR1 794 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 NCKAP5LQ9HCH0 1330 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 GOLGA8BA8MQT2 603 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 RNF8O76064 485 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 FAM133BQ5BKY9 247 aaKnown RBP12.99□□□□□ -0.33
NPHP4-202ENST00000378161 YTHDF3Q7Z739 585 aaKnown RBP12.99□□□□□ -0.33
NPHP4-202ENST00000378161 SIKE1Q9BRV8 207 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 OSBPL3Q9H4L5 887 aa12.99□□□□□ -0.33
NPHP4-202ENST00000378161 UNC13BO14795 1591 aa12.98□□□□□ -0.33
NPHP4-202ENST00000378161 OPHN1O60890 802 aa12.98□□□□□ -0.33
NPHP4-202ENST00000378161 CHGBP05060 677 aa12.98□□□□□ -0.33
NPHP4-202ENST00000378161 MOV10L1Q9BXT6 1211 aaKnown RBP12.98□□□□□ -0.33
NPHP4-202ENST00000378161 MAGEC2Q9UBF1 373 aaPredicted RBP12.98□□□□□ -0.33
NPHP4-202ENST00000378161 GMNCA6NCL1 334 aa12.98□□□□□ -0.33
NPHP4-202ENST00000378161 LSP1P33241 339 aa12.98□□□□□ -0.33
NPHP4-202ENST00000378161 OLFML2BQ68BL8 750 aa12.98□□□□□ -0.33
NPHP4-202ENST00000378161 C8orf74Q6P047 294 aa12.98□□□□□ -0.33
NPHP4-202ENST00000378161 INTS8Q75QN2 995 aaKnown RBP12.98□□□□□ -0.33
NPHP4-202ENST00000378161 UBE3BQ7Z3V4 1068 aa12.98□□□□□ -0.33
NPHP4-202ENST00000378161 SH3GL1Q99961 368 aa12.98□□□□□ -0.33
NPHP4-202ENST00000378161 YIPF2Q9BWQ6 316 aa12.98□□□□□ -0.33
NPHP4-202ENST00000378161 PFDN4Q9NQP4 134 aa12.98□□□□□ -0.33
NPHP4-202ENST00000378161 PA2G4Q9UQ80 394 aaKnown RBP12.98□□□□□ -0.33
NPHP4-202ENST00000378161 TNRQ92752 1358 aa12.98□□□□□ -0.33
NPHP4-202ENST00000378161 RGS12O14924 1447 aa12.98□□□□□ -0.33
NPHP4-202ENST00000378161 SPDYE3A6NKU9 549 aa12.98□□□□□ -0.33
NPHP4-202ENST00000378161 ZNF213O14771 459 aa12.98□□□□□ -0.33
NPHP4-202ENST00000378161 SERPINB4P48594 390 aa12.98□□□□□ -0.33
NPHP4-202ENST00000378161 ADKP55263 362 aaKnown RBP12.98□□□□□ -0.33
NPHP4-202ENST00000378161 PSMC1P62191 440 aaKnown RBP12.98□□□□□ -0.33
NPHP4-202ENST00000378161 NBPF14Q5TI25 921 aa12.98□□□□□ -0.33
NPHP4-202ENST00000378161 ARMCX5Q6P1M9 558 aa12.98□□□□□ -0.33
NPHP4-202ENST00000378161 KCNG4Q8TDN1 519 aa12.98□□□□□ -0.33
NPHP4-202ENST00000378161 GPR101Q96P66 508 aaPredicted RBP12.98□□□□□ -0.33
NPHP4-202ENST00000378161 EIF2AQ9BY44 585 aaKnown RBP12.98□□□□□ -0.33
NPHP4-202ENST00000378161 IDH1O75874 414 aaKnown RBP12.97□□□□□ -0.33
NPHP4-202ENST00000378161 CPA1P15085 419 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 NAT1P18440 290 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 RASA3Q14644 834 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 MCMDC2Q4G0Z9 681 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms