RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 MYCLP12524 364 aaPredicted RBP9.2□□□□□ -0.94
CKAP2-203ENST00000378037 TMEM132AQ24JP5 1023 aa9.2□□□□□ -0.94
CKAP2-203ENST00000378037 PPFIBP1Q86W92 1011 aa9.2□□□□□ -0.94
CKAP2-203ENST00000378037 ANKRD20A12PQ8NF67 263 aa9.2□□□□□ -0.94
CKAP2-203ENST00000378037 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.2□□□□□ -0.94
CKAP2-203ENST00000378037 XPO4Q9C0E2 1151 aaKnown RBP9.2□□□□□ -0.94
CKAP2-203ENST00000378037 GINS2Q9Y248 185 aa9.2□□□□□ -0.94
CKAP2-203ENST00000378037 TUBGCP6Q96RT7 1819 aa9.2□□□□□ -0.94
CKAP2-203ENST00000378037 CERKLQ49MI3 558 aaPredicted RBP9.2□□□□□ -0.94
CKAP2-203ENST00000378037 EARS2Q5JPH6 523 aaKnown RBP9.2□□□□□ -0.94
CKAP2-203ENST00000378037 DTHD1Q6ZMT9 781 aa9.2□□□□□ -0.94
CKAP2-203ENST00000378037 SLF2Q8IX21 1173 aa9.2□□□□□ -0.94
CKAP2-203ENST00000378037 SMARCC2Q8TAQ2 1214 aa9.2□□□□□ -0.94
CKAP2-203ENST00000378037 IGDCC4Q8TDY8 1250 aa9.2□□□□□ -0.94
CKAP2-203ENST00000378037 TMEM47Q9BQJ4 181 aa9.2□□□□□ -0.94
CKAP2-203ENST00000378037 CRACR2AQ9BSW2 395 aa9.2□□□□□ -0.94
CKAP2-203ENST00000378037 SERPINB13Q9UIV8 391 aa9.2□□□□□ -0.94
CKAP2-203ENST00000378037 MYCP01106 439 aaPredicted RBP9.19□□□□□ -0.94
CKAP2-203ENST00000378037 TPM1P09493 284 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 PRR29P0C7W0 189 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 SCG2P13521 617 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 ZNF445P59923 1031 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 DGKZQ13574 1117 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 NBPF3Q9H094 633 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 TAB2Q9NYJ8 693 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 MAGEC2Q9UBF1 373 aaPredicted RBP9.19□□□□□ -0.94
CKAP2-203ENST00000378037 ECE2O60344 883 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 ATP2B4P23634 1241 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 USP8P40818 1118 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 MTIF2P46199 727 aaKnown RBP9.19□□□□□ -0.94
CKAP2-203ENST00000378037 TERF1P54274 439 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 ICA1Q05084 483 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 NOLC1Q14978 699 aaKnown RBP eCLIP9.19□□□□□ -0.94
CKAP2-203ENST00000378037 KCTD19Q17RG1 926 aaPredicted RBP9.19□□□□□ -0.94
CKAP2-203ENST00000378037 PRR16Q569H4 304 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 SAMD7Q7Z3H4 446 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.19□□□□□ -0.94
CKAP2-203ENST00000378037 FSD2A1L4K1 749 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 POTEMA6NI47 508 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 MYO1BO43795 1136 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 POLD1P28340 1107 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 PDE6BP35913 854 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 MATR3P43243 847 aaKnown RBP eCLIP9.19□□□□□ -0.942e-6■■■□□ 18.3
CKAP2-203ENST00000378037 NCAPH2Q6IBW4 605 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 VGLL2Q8N8G2 317 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 CCDC47Q96A33 483 aaKnown RBP9.19□□□□□ -0.94
CKAP2-203ENST00000378037 ZNF668Q96K58 619 aaPredicted RBP9.19□□□□□ -0.94
CKAP2-203ENST00000378037 CEP131Q9UPN4 1083 aa9.19□□□□□ -0.94
CKAP2-203ENST00000378037 SFI1A8K8P3 1242 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 HARSP12081 509 aaKnown RBP9.18□□□□□ -0.94
CKAP2-203ENST00000378037 ALDH1B1P30837 517 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.18□□□□□ -0.94
CKAP2-203ENST00000378037 BARGINQ6ZT62 677 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 DAGLAQ9Y4D2 1042 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 TACC3Q9Y6A5 838 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 ITGB4P16144 1822 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 USP17L10C9JJH3 530 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 FOXP2O15409 715 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 RNASE9P60153 205 aaKnown RBP9.18□□□□□ -0.94
CKAP2-203ENST00000378037 LLGL1Q15334 1064 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 DEF6Q9H4E7 631 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 SLC39A2Q9NP94 309 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 SAMSN1Q9NSI8 373 aaKnown RBP9.18□□□□□ -0.94
CKAP2-203ENST00000378037 ZKSCAN5Q9Y2L8 839 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 PCDHA1Q9Y5I3 950 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 SHTN1A0MZ66 631 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 IPO7O95373 1038 aaKnown RBP9.18□□□□□ -0.94
CKAP2-203ENST00000378037 ALAS1P13196 640 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 FGFR2P21802 821 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 CRKP46108 304 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 SF3B3Q15393 1217 aaKnown RBP9.18□□□□□ -0.94
CKAP2-203ENST00000378037 ZFYVE27Q5T4F4 411 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 BRAPQ7Z569 592 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 CDAN1Q8IWY9 1227 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 NIM1KQ8IY84 436 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 MNS1Q8NEH6 495 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 LLPHQ9BRT6 129 aaKnown RBP9.18□□□□□ -0.94
CKAP2-203ENST00000378037 PAGR1Q9BTK6 254 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 TMEM39BQ9GZU3 492 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 KIAA1468Q9P260 1216 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 ARPP21Q9UBL0 812 aaPredicted RBP9.18□□□□□ -0.94
CKAP2-203ENST00000378037 LAMB4A4D0S4 1761 aa9.18□□□□□ -0.94
CKAP2-203ENST00000378037 SPDYE3A6NKU9 549 aa9.17□□□□□ -0.94
CKAP2-203ENST00000378037 CALML3P27482 149 aa9.17□□□□□ -0.94
CKAP2-203ENST00000378037 DDIT3P35638 169 aa9.17□□□□□ -0.94
CKAP2-203ENST00000378037 NAA30Q147X3 362 aaPredicted RBP9.17□□□□□ -0.94
CKAP2-203ENST00000378037 FILIP1LQ4L180 1135 aa9.17□□□□□ -0.94
CKAP2-203ENST00000378037 TDRD12Q587J7 1177 aaKnown RBP9.17□□□□□ -0.94
CKAP2-203ENST00000378037 C6orf50Q9HD87 102 aa9.17□□□□□ -0.94
CKAP2-203ENST00000378037 DNAI1Q9UI46 699 aa9.17□□□□□ -0.94
CKAP2-203ENST00000378037 RTL9Q8NET4 1388 aa9.17□□□□□ -0.94
CKAP2-203ENST00000378037 N4BP2Q86UW6 1770 aaPredicted RBP9.17□□□□□ -0.94
CKAP2-203ENST00000378037 CEP350Q5VT06 3117 aa9.17□□□□□ -0.94
CKAP2-203ENST00000378037 BBOX1O75936 387 aa9.17□□□□□ -0.94
CKAP2-203ENST00000378037 RILPL1Q5EBL4 403 aa9.17□□□□□ -0.94
CKAP2-203ENST00000378037 ZNF772Q68DY9 489 aaPredicted RBP9.17□□□□□ -0.94
CKAP2-203ENST00000378037 POTEAQ6S8J7 498 aa9.17□□□□□ -0.94
CKAP2-203ENST00000378037 BLIDQ8IZY5 108 aa9.17□□□□□ -0.94
CKAP2-203ENST00000378037 REXO1Q8N1G1 1221 aaKnown RBP9.17□□□□□ -0.94
CKAP2-203ENST00000378037 TBCKQ8TEA7 893 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms