RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 SLC1A4P43007 532 aa15.55■□□□□ 0.08
CKAP2-202ENST00000378034 SEC23AQ15436 765 aa15.55■□□□□ 0.08
CKAP2-202ENST00000378034 RASEFQ8IZ41 740 aa15.55■□□□□ 0.08
CKAP2-202ENST00000378034 NEK1Q96PY6 1258 aa15.55■□□□□ 0.08
CKAP2-202ENST00000378034 KAT14Q9H8E8 782 aa15.55■□□□□ 0.08
CKAP2-202ENST00000378034 FEM1BQ9UK73 627 aa15.55■□□□□ 0.08
CKAP2-202ENST00000378034 RABGAP1Q9Y3P9 1069 aa15.55■□□□□ 0.08
CKAP2-202ENST00000378034 RLFQ13129 1914 aa15.54■□□□□ 0.08
CKAP2-202ENST00000378034 WDR19Q8NEZ3 1342 aa15.54■□□□□ 0.08
CKAP2-202ENST00000378034 IFIT3O14879 490 aaKnown RBP15.54■□□□□ 0.08
CKAP2-202ENST00000378034 PLA2G6O60733 806 aa15.54■□□□□ 0.08
CKAP2-202ENST00000378034 KIF22Q14807 665 aa15.54■□□□□ 0.08
CKAP2-202ENST00000378034 IFIT1BQ5T764 474 aaKnown RBP15.54■□□□□ 0.08
CKAP2-202ENST00000378034 MB21D1Q8N884 522 aa15.54■□□□□ 0.08
CKAP2-202ENST00000378034 TMEM87BQ96K49 555 aa15.54■□□□□ 0.08
CKAP2-202ENST00000378034 CASP8AP2Q9UKL3 1982 aa15.53■□□□□ 0.08
CKAP2-202ENST00000378034 SPDYE16A6NNV3 312 aaPredicted RBP15.53■□□□□ 0.08
CKAP2-202ENST00000378034 ANTXR2P58335 489 aa15.53■□□□□ 0.08
CKAP2-202ENST00000378034 LACTBP83111 547 aaPredicted RBP15.53■□□□□ 0.08
CKAP2-202ENST00000378034 ANKRD13CQ8N6S4 541 aa15.53■□□□□ 0.08
CKAP2-202ENST00000378034 PNMA1Q8ND90 353 aa15.53■□□□□ 0.08
CKAP2-202ENST00000378034 RBPJLQ9UBG7 517 aa15.53■□□□□ 0.08
CKAP2-202ENST00000378034 PPP1R9AQ9ULJ8 1098 aa15.53■□□□□ 0.08
CKAP2-202ENST00000378034 ADAMTS5Q9UNA0 930 aa15.53■□□□□ 0.08
CKAP2-202ENST00000378034 PRC1O43663 620 aa15.53■□□□□ 0.08
CKAP2-202ENST00000378034 WTAPQ15007 396 aa15.53■□□□□ 0.08
CKAP2-202ENST00000378034 FAM160B2Q86V87 743 aa15.53■□□□□ 0.08
CKAP2-202ENST00000378034 TMTC2Q8N394 836 aa15.53■□□□□ 0.08
CKAP2-202ENST00000378034 PRPF38AQ8NAV1 312 aaKnown RBP15.53■□□□□ 0.08
CKAP2-202ENST00000378034 GPRC5AQ8NFJ5 357 aa15.53■□□□□ 0.08
CKAP2-202ENST00000378034 CHURC1Q8WUH1 139 aa15.53■□□□□ 0.08
CKAP2-202ENST00000378034 NUP88Q99567 741 aaPredicted RBP15.53■□□□□ 0.08
CKAP2-202ENST00000378034 SLF1Q9BQI6 1058 aa15.53■□□□□ 0.08
CKAP2-202ENST00000378034 SNX14Q9Y5W7 946 aa15.53■□□□□ 0.08
CKAP2-202ENST00000378034 A0A0G2JMZ2 1700 aa15.52■□□□□ 0.08
CKAP2-202ENST00000378034 GNRH1P01148 92 aa15.52■□□□□ 0.07
CKAP2-202ENST00000378034 SNHG28P0DPA3 235 aa15.52■□□□□ 0.07
CKAP2-202ENST00000378034 FDX1P10109 184 aa15.52■□□□□ 0.07
CKAP2-202ENST00000378034 TMEM67Q5HYA8 995 aa15.52■□□□□ 0.07
CKAP2-202ENST00000378034 IGDCC4Q8TDY8 1250 aa15.52■□□□□ 0.07
CKAP2-202ENST00000378034 PDHBP11177 359 aa15.51■□□□□ 0.07
CKAP2-202ENST00000378034 PSMA5P28066 241 aa15.51■□□□□ 0.07
CKAP2-202ENST00000378034 STAT2P52630 851 aa15.51■□□□□ 0.07
CKAP2-202ENST00000378034 ERVK-9P63128 1117 aa15.51■□□□□ 0.07
CKAP2-202ENST00000378034 ERVK-24P63145 666 aa15.51■□□□□ 0.07
CKAP2-202ENST00000378034 C8orf34Q49A92 452 aa15.51■□□□□ 0.07
CKAP2-202ENST00000378034 DHX32Q7L7V1 743 aaKnown RBP15.51■□□□□ 0.07
CKAP2-202ENST00000378034 CD99L2Q8TCZ2 262 aa15.51■□□□□ 0.07
CKAP2-202ENST00000378034 TMEM232C9JQI7 657 aa15.51■□□□□ 0.07
CKAP2-202ENST00000378034 LIFRP42702 1097 aa15.51■□□□□ 0.07
CKAP2-202ENST00000378034 CCNA1P78396 465 aa15.51■□□□□ 0.07
CKAP2-202ENST00000378034 ADCK5Q3MIX3 580 aa15.51■□□□□ 0.07
CKAP2-202ENST00000378034 GPATCH4Q5T3I0 446 aaKnown RBP15.51■□□□□ 0.07
CKAP2-202ENST00000378034 POTEEQ6S8J3 1075 aa15.51■□□□□ 0.07
CKAP2-202ENST00000378034 CHST3Q7LGC8 479 aa15.51■□□□□ 0.07
CKAP2-202ENST00000378034 ATG4CQ96DT6 458 aa15.51■□□□□ 0.07
CKAP2-202ENST00000378034 TXNRD2Q9NNW7 524 aa15.51■□□□□ 0.07
CKAP2-202ENST00000378034 FBXO28Q9NVF7 368 aa15.51■□□□□ 0.07
CKAP2-202ENST00000378034 MGAMO43451 1857 aa15.5■□□□□ 0.07
CKAP2-202ENST00000378034 VWA5AO00534 786 aa15.5■□□□□ 0.07
CKAP2-202ENST00000378034 CNMDO75829 334 aa15.5■□□□□ 0.07
CKAP2-202ENST00000378034 FCGRTP55899 365 aa15.5■□□□□ 0.07
CKAP2-202ENST00000378034 EXOSC10Q01780 885 aaKnown RBP15.5■□□□□ 0.07
CKAP2-202ENST00000378034 CCDC96Q2M329 555 aa15.5■□□□□ 0.07
CKAP2-202ENST00000378034 BTNL9Q6UXG8 535 aa15.5■□□□□ 0.07
CKAP2-202ENST00000378034 CTU1Q7Z7A3 348 aaKnown RBP15.5■□□□□ 0.07
CKAP2-202ENST00000378034 PAGR1Q9BTK6 254 aa15.5■□□□□ 0.07
CKAP2-202ENST00000378034 SH2B2O14492 632 aaPredicted RBP15.49■□□□□ 0.07
CKAP2-202ENST00000378034 PSMC4P43686 418 aa15.49■□□□□ 0.07
CKAP2-202ENST00000378034 ANAPC15P60006 121 aa15.49■□□□□ 0.07
CKAP2-202ENST00000378034 ZNF543Q08ER8 600 aa15.49■□□□□ 0.07
CKAP2-202ENST00000378034 PKN2Q16513 984 aaKnown RBP15.49■□□□□ 0.07
CKAP2-202ENST00000378034 ASPRV1Q53RT3 343 aa15.49■□□□□ 0.07
CKAP2-202ENST00000378034 KCTD1Q719H9 257 aa15.49■□□□□ 0.07
CKAP2-202ENST00000378034 JAKMIP1Q96N16 626 aaKnown RBP15.49■□□□□ 0.07
CKAP2-202ENST00000378034 TM6SF1Q9BZW5 370 aa15.49■□□□□ 0.07
CKAP2-202ENST00000378034 EFCC1Q9HA90 598 aa15.49■□□□□ 0.07
CKAP2-202ENST00000378034 LY9Q9HBG7 655 aa15.49■□□□□ 0.07
CKAP2-202ENST00000378034 BTBD7Q9P203 1132 aa15.49■□□□□ 0.07
CKAP2-202ENST00000378034 ISY1Q9ULR0 285 aaKnown RBP15.49■□□□□ 0.07
CKAP2-202ENST00000378034 MTMR7Q9Y216 660 aa15.49■□□□□ 0.07
CKAP2-202ENST00000378034 ZBED4O75132 1171 aa15.49■□□□□ 0.07
CKAP2-202ENST00000378034 HOXD10P28358 340 aa15.49■□□□□ 0.07
CKAP2-202ENST00000378034 MAPK4P31152 587 aa15.49■□□□□ 0.07
CKAP2-202ENST00000378034 PRMT2P55345 433 aa15.49■□□□□ 0.07
CKAP2-202ENST00000378034 IKQ13123 557 aaPredicted RBP15.49■□□□□ 0.07
CKAP2-202ENST00000378034 Q3C1V9 767 aa15.49■□□□□ 0.07
CKAP2-202ENST00000378034 BLOC1S2Q6QNY1 142 aa15.49■□□□□ 0.07
CKAP2-202ENST00000378034 KIFC2Q96AC6 838 aa15.49■□□□□ 0.07
CKAP2-202ENST00000378034 ATP2A1O14983 1001 aa15.48■□□□□ 0.07
CKAP2-202ENST00000378034 FMNL1O95466 1100 aaPredicted RBP15.48■□□□□ 0.07
CKAP2-202ENST00000378034 CATIPQ7Z7H3 387 aa15.48■□□□□ 0.07
CKAP2-202ENST00000378034 SHCBP1Q8NEM2 672 aa15.48■□□□□ 0.07
CKAP2-202ENST00000378034 MAP3K14Q99558 947 aa15.48■□□□□ 0.07
CKAP2-202ENST00000378034 SPATC1LQ9H0A9 340 aa15.48■□□□□ 0.07
CKAP2-202ENST00000378034 CTDP1Q9Y5B0 961 aaPredicted RBP15.48■□□□□ 0.07
CKAP2-202ENST00000378034 PARP1P09874 1014 aaKnown RBP15.47■□□□□ 0.07
CKAP2-202ENST00000378034 COL11A1P12107 1806 aaPredicted RBP15.47■□□□□ 0.07
CKAP2-202ENST00000378034 COPB2P35606 906 aa15.47■□□□□ 0.07
CKAP2-202ENST00000378034 OAZ1P54368 228 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms