RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 CAPN15O75808 1086 aa12.02□□□□□ -0.49
HIF3A-205ENST00000377670 IGKV5-2P06315 115 aa12.02□□□□□ -0.49
HIF3A-205ENST00000377670 ADD1P35611 737 aaKnown RBP12.02□□□□□ -0.49
HIF3A-205ENST00000377670 NOX5Q96PH1 765 aa12.02□□□□□ -0.49
HIF3A-205ENST00000377670 DAPK3O43293 454 aa12.02□□□□□ -0.49
HIF3A-205ENST00000377670 PTPN12Q05209 780 aaKnown RBP12.02□□□□□ -0.49
HIF3A-205ENST00000377670 DEPTORQ8TB45 409 aa12.02□□□□□ -0.49
HIF3A-205ENST00000377670 COPRSQ9NQ92 184 aa12.02□□□□□ -0.49
HIF3A-205ENST00000377670 MAPK8IP1Q9UQF2 711 aa12.02□□□□□ -0.49
HIF3A-205ENST00000377670 DIP2CQ9Y2E4 1556 aa12.02□□□□□ -0.49
HIF3A-205ENST00000377670 PDE8BO95263 885 aa12.02□□□□□ -0.49
HIF3A-205ENST00000377670 USP17L8P0C7I0 530 aa12.02□□□□□ -0.49
HIF3A-205ENST00000377670 KRT5P13647 590 aa12.02□□□□□ -0.49
HIF3A-205ENST00000377670 ZSCAN20P17040 1043 aaPredicted RBP12.02□□□□□ -0.49
HIF3A-205ENST00000377670 TFAP4Q01664 338 aa12.02□□□□□ -0.49
HIF3A-205ENST00000377670 GABPAQ06546 454 aa12.02□□□□□ -0.49
HIF3A-205ENST00000377670 HEG1Q9ULI3 1381 aa12.02□□□□□ -0.49
HIF3A-205ENST00000377670 KCNQ2O43526 872 aa12.01□□□□□ -0.49
HIF3A-205ENST00000377670 CPLX4Q7Z7G2 160 aa12.01□□□□□ -0.49
HIF3A-205ENST00000377670 NLRP10Q86W26 655 aa12.01□□□□□ -0.49
HIF3A-205ENST00000377670 MYRIPQ8NFW9 859 aa12.01□□□□□ -0.49
HIF3A-205ENST00000377670 RSRC1Q96IZ7 334 aaKnown RBP12.01□□□□□ -0.49
HIF3A-205ENST00000377670 PRDM5Q9NQX1 630 aaPredicted RBP12.01□□□□□ -0.49
HIF3A-205ENST00000377670 POLR2MP0CAP2 368 aa12.01□□□□□ -0.49
HIF3A-205ENST00000377670 IFT81Q8WYA0 676 aa12.01□□□□□ -0.49
HIF3A-205ENST00000377670 STAMQ92783 540 aa12.01□□□□□ -0.49
HIF3A-205ENST00000377670 CAMSAP1Q5T5Y3 1602 aa12.01□□□□□ -0.49
HIF3A-205ENST00000377670 SMIM23A6NLE4 172 aa12.01□□□□□ -0.49
HIF3A-205ENST00000377670 SH3BP5O60239 455 aa12.01□□□□□ -0.49
HIF3A-205ENST00000377670 PPP2R3AQ06190 1150 aa12.01□□□□□ -0.49
HIF3A-205ENST00000377670 PPP1R14CQ8TAE6 165 aa12.01□□□□□ -0.49
HIF3A-205ENST00000377670 MED10Q9BTT4 135 aa12.01□□□□□ -0.49
HIF3A-205ENST00000377670 VPS54Q9P1Q0 977 aa12.01□□□□□ -0.49
HIF3A-205ENST00000377670 DIS3L2Q8IYB7 885 aaKnown RBP12.01□□□□□ -0.49
HIF3A-205ENST00000377670 SREK1Q8WXA9 508 aaKnown RBP12.01□□□□□ -0.49
HIF3A-205ENST00000377670 SELENOOQ9BVL4 669 aa12.01□□□□□ -0.49
HIF3A-205ENST00000377670 CCNT1O60563 726 aaKnown RBP12.01□□□□□ -0.49
HIF3A-205ENST00000377670 ERCC3P19447 782 aa12.01□□□□□ -0.49
HIF3A-205ENST00000377670 MIER3Q7Z3K6 550 aa12.01□□□□□ -0.49
HIF3A-205ENST00000377670 RIMBP3CA6NJZ7 1639 aa12□□□□□ -0.49
HIF3A-205ENST00000377670 RIMBP3BA6NNM3 1639 aa12□□□□□ -0.49
HIF3A-205ENST00000377670 RIMBP3Q9UFD9 1639 aa12□□□□□ -0.49
HIF3A-205ENST00000377670 UBXN2AP68543 259 aa12□□□□□ -0.49
HIF3A-205ENST00000377670 MAK16Q9BXY0 300 aaKnown RBP12□□□□□ -0.49
HIF3A-205ENST00000377670 IFNL3Q8IZI9 196 aa12□□□□□ -0.49
HIF3A-205ENST00000377670 SUGCTQ9HAC7 445 aa12□□□□□ -0.49
HIF3A-205ENST00000377670 NRBP2Q9NSY0 501 aa12□□□□□ -0.49
HIF3A-205ENST00000377670 P4HA1P13674 534 aa12□□□□□ -0.49
HIF3A-205ENST00000377670 ELF2Q15723 593 aa12□□□□□ -0.49
HIF3A-205ENST00000377670 SUSD4Q5VX71 490 aa12□□□□□ -0.49
HIF3A-205ENST00000377670 SV2BQ7L1I2 683 aa12□□□□□ -0.49
HIF3A-205ENST00000377670 LSG1Q9H089 658 aaKnown RBP12□□□□□ -0.49
HIF3A-205ENST00000377670 KIDINS220Q9ULH0 1771 aa12□□□□□ -0.49
HIF3A-205ENST00000377670 RPS6KA4O75676 772 aa12□□□□□ -0.49
HIF3A-205ENST00000377670 MFSD14CQ5VZR4 134 aa12□□□□□ -0.49
HIF3A-205ENST00000377670 M0R2C6 588 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 KRT86O43790 486 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 ATF7P17544 494 aaPredicted RBP11.99□□□□□ -0.49
HIF3A-205ENST00000377670 KRT83P78385 493 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 PPARAQ07869 468 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 GPIHBP1Q8IV16 184 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 RASAL2Q9UJF2 1139 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 PRKAB2O43741 272 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 CCDC125Q86Z20 511 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 GSDMBQ8TAX9 411 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 AFAP1L1Q8TED9 768 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 TMEM87BQ96K49 555 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 ATG3Q9NT62 314 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 HACL1Q9UJ83 578 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 GAS7O60861 476 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 GOLGA8HP0CJ92 632 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 TERF1P54274 439 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 PLCB3Q01970 1234 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 KIF5AQ12840 1032 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 DAAM2Q86T65 1068 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 SESTD1Q86VW0 696 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 ZNF157P51786 506 aaPredicted RBP11.99□□□□□ -0.49
HIF3A-205ENST00000377670 DYNLL1P63167 89 aaKnown RBP11.99□□□□□ -0.49
HIF3A-205ENST00000377670 ERBB4Q15303 1308 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 SEMA3EO15041 775 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 ECE1P42892 770 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 GABPB1Q06547 395 aaPredicted RBP11.99□□□□□ -0.49
HIF3A-205ENST00000377670 SPAG1Q07617 926 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 KRT40Q6A162 431 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 APOBEC3FQ8IUX4 373 aaKnown RBP11.99□□□□□ -0.49
HIF3A-205ENST00000377670 NUB1Q9Y5A7 615 aa11.99□□□□□ -0.49
HIF3A-205ENST00000377670 LRRC7Q96NW7 1537 aa11.98□□□□□ -0.49
HIF3A-205ENST00000377670 TMEM232C9JQI7 657 aa11.98□□□□□ -0.49
HIF3A-205ENST00000377670 CCDC50Q8IVM0 306 aa11.98□□□□□ -0.49
HIF3A-205ENST00000377670 EPB41P11171 864 aaKnown RBP11.98□□□□□ -0.49
HIF3A-205ENST00000377670 DCAF17Q5H9S7 520 aaPredicted RBP11.98□□□□□ -0.49
HIF3A-205ENST00000377670 RAB3IL1Q8TBN0 382 aa11.98□□□□□ -0.49
HIF3A-205ENST00000377670 GCNAQ96QF7 691 aa11.98□□□□□ -0.49
HIF3A-205ENST00000377670 STMN4Q9H169 189 aaPredicted RBP11.98□□□□□ -0.49
HIF3A-205ENST00000377670 MYL3P08590 195 aa11.98□□□□□ -0.49
HIF3A-205ENST00000377670 CYP21A2P08686 494 aa11.98□□□□□ -0.49
HIF3A-205ENST00000377670 TUBB4BP68371 445 aa11.98□□□□□ -0.49
HIF3A-205ENST00000377670 SLFN13Q68D06 897 aa11.98□□□□□ -0.49
HIF3A-205ENST00000377670 DSCC1Q9BVC3 393 aa11.98□□□□□ -0.49
HIF3A-205ENST00000377670 CDC42BPGQ6DT37 1551 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms