RNA–Protein interactions for RNA: ENST00000377050.4

UBD-203, Transcript of ubiquitin D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBD, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBD-203ENST00000377050 KIF28PB7ZC32 967 aa12.73□□□□□ -0.37
UBD-203ENST00000377050 ZBTB43O43298 467 aa12.73□□□□□ -0.37
UBD-203ENST00000377050 ZBTB48P10074 688 aaPredicted RBP12.73□□□□□ -0.37
UBD-203ENST00000377050 PFKFB1P16118 471 aa12.73□□□□□ -0.37
UBD-203ENST00000377050 IFNAR1P17181 557 aa12.73□□□□□ -0.37
UBD-203ENST00000377050 HAND2P61296 217 aa12.73□□□□□ -0.37
UBD-203ENST00000377050 GUCY1B3Q02153 619 aa12.73□□□□□ -0.37
UBD-203ENST00000377050 SP3Q02447 781 aa12.73□□□□□ -0.37
UBD-203ENST00000377050 NCAPHQ15003 741 aa12.73□□□□□ -0.37
UBD-203ENST00000377050 PTPN14Q15678 1187 aa12.73□□□□□ -0.37
UBD-203ENST00000377050 SLC9C2Q5TAH2 1124 aa12.73□□□□□ -0.37
UBD-203ENST00000377050 PRAMEF18Q5VWM3 479 aa12.73□□□□□ -0.37
UBD-203ENST00000377050 RESP18Q5W5W9 173 aa12.73□□□□□ -0.37
UBD-203ENST00000377050 CCDC102BQ68D86 513 aa12.73□□□□□ -0.37
UBD-203ENST00000377050 KRT40Q6A162 431 aa12.73□□□□□ -0.37
UBD-203ENST00000377050 APOA5Q6Q788 366 aa12.73□□□□□ -0.37
UBD-203ENST00000377050 FCHSD1Q86WN1 690 aa12.73□□□□□ -0.37
UBD-203ENST00000377050 TBC1D10CQ8IV04 446 aa12.73□□□□□ -0.37
UBD-203ENST00000377050 ZNF579Q8NAF0 562 aaKnown RBP12.73□□□□□ -0.37
UBD-203ENST00000377050 MAP3K14Q99558 947 aa12.73□□□□□ -0.37
UBD-203ENST00000377050 GREM2Q9H772 168 aa12.73□□□□□ -0.37
UBD-203ENST00000377050 PIH1D3Q9NQM4 214 aaKnown RBP12.73□□□□□ -0.37
UBD-203ENST00000377050 GPHNQ9NQX3 736 aaPredicted RBP12.73□□□□□ -0.37
UBD-203ENST00000377050 TRMT112Q9UI30 125 aaKnown RBP12.73□□□□□ -0.37
UBD-203ENST00000377050 HOOK1Q9UJC3 728 aaKnown RBP12.73□□□□□ -0.37
UBD-203ENST00000377050 CENPFP49454 3210 aa12.72□□□□□ -0.37
UBD-203ENST00000377050 ZNF532Q9HCE3 1301 aa12.72□□□□□ -0.37
UBD-203ENST00000377050 BRCA2P51587 3418 aa12.72□□□□□ -0.37
UBD-203ENST00000377050 FMNL1O95466 1100 aaPredicted RBP12.72□□□□□ -0.37
UBD-203ENST00000377050 SLC5A1P13866 664 aa12.72□□□□□ -0.37
UBD-203ENST00000377050 SYKP43405 635 aa12.72□□□□□ -0.37
UBD-203ENST00000377050 GPSM2P81274 684 aa12.72□□□□□ -0.37
UBD-203ENST00000377050 MAP3K12Q12852 859 aa12.72□□□□□ -0.37
UBD-203ENST00000377050 PRKG1Q13976 671 aa12.72□□□□□ -0.37
UBD-203ENST00000377050 TRIM29Q14134 588 aa12.72□□□□□ -0.37
UBD-203ENST00000377050 CYB5R4Q7L1T6 521 aa12.72□□□□□ -0.37
UBD-203ENST00000377050 VPS37DQ86XT2 251 aa12.72□□□□□ -0.37
UBD-203ENST00000377050 TBC1D16Q8TBP0 767 aa12.72□□□□□ -0.37
UBD-203ENST00000377050 SLC10A4Q96EP9 437 aa12.72□□□□□ -0.37
UBD-203ENST00000377050 HTATIP2Q9BUP3 242 aa12.72□□□□□ -0.37
UBD-203ENST00000377050 LY9Q9HBG7 655 aa12.72□□□□□ -0.37
UBD-203ENST00000377050 SCAF8Q9UPN6 1271 aaKnown RBP12.72□□□□□ -0.37
UBD-203ENST00000377050 NR2E3Q9Y5X4 410 aa12.72□□□□□ -0.37
UBD-203ENST00000377050 LAMB1P07942 1786 aa12.71□□□□□ -0.37
UBD-203ENST00000377050 CCDC196A0A1B0GTZ2 297 aa12.71□□□□□ -0.37
UBD-203ENST00000377050 IGSF3O75054 1194 aa12.71□□□□□ -0.37
UBD-203ENST00000377050 NT5C2P49902 561 aa12.71□□□□□ -0.37
UBD-203ENST00000377050 NCBP1Q09161 790 aaKnown RBP12.71□□□□□ -0.37
UBD-203ENST00000377050 DPCR1Q3MIW9 517 aa12.71□□□□□ -0.37
UBD-203ENST00000377050 OGFOD1Q8N543 542 aa12.71□□□□□ -0.37
UBD-203ENST00000377050 TRIML1Q8N9V2 468 aa12.71□□□□□ -0.37
UBD-203ENST00000377050 KIF18AQ8NI77 898 aa12.71□□□□□ -0.37
UBD-203ENST00000377050 STAG1Q8WVM7 1258 aa12.71□□□□□ -0.37
UBD-203ENST00000377050 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.71□□□□□ -0.37
UBD-203ENST00000377050 GTPBP4Q9BZE4 634 aaKnown RBP12.71□□□□□ -0.37
UBD-203ENST00000377050 FOXP1Q9H334 677 aaPredicted RBP12.71□□□□□ -0.37
UBD-203ENST00000377050 RNF41Q9H4P4 317 aaPredicted RBP12.71□□□□□ -0.37
UBD-203ENST00000377050 FAM217BQ9NTX9 383 aaPredicted RBP12.71□□□□□ -0.37
UBD-203ENST00000377050 SPDYE4A6NLX3 237 aa12.7□□□□□ -0.38
UBD-203ENST00000377050 GOLGA8AA7E2F4 631 aa12.7□□□□□ -0.38
UBD-203ENST00000377050 IGF2BP3O00425 579 aaKnown RBP eCLIP12.7□□□□□ -0.38
UBD-203ENST00000377050 WDHD1O75717 1129 aaPredicted RBP12.7□□□□□ -0.38
UBD-203ENST00000377050 POLR3DP05423 398 aaPredicted RBP12.7□□□□□ -0.38
UBD-203ENST00000377050 PCP11498 1178 aaKnown RBP12.7□□□□□ -0.38
UBD-203ENST00000377050 FOSBP53539 338 aa12.7□□□□□ -0.38
UBD-203ENST00000377050 SSRP1Q08945 709 aaKnown RBP12.7□□□□□ -0.38
UBD-203ENST00000377050 CRHR2Q13324 411 aa12.7□□□□□ -0.38
UBD-203ENST00000377050 AKNAD1Q5T1N1 836 aa12.7□□□□□ -0.38
UBD-203ENST00000377050 LDLRAD1Q5T700 205 aa12.7□□□□□ -0.38
UBD-203ENST00000377050 NT5DC1Q5TFE4 455 aa12.7□□□□□ -0.38
UBD-203ENST00000377050 KANK3Q6NY19 840 aa12.7□□□□□ -0.38
UBD-203ENST00000377050 IFNL3Q8IZI9 196 aa12.7□□□□□ -0.38
UBD-203ENST00000377050 C16orf45Q96MC5 204 aaPredicted RBP12.7□□□□□ -0.38
UBD-203ENST00000377050 NACAP1Q9BZK3 213 aa12.7□□□□□ -0.38
UBD-203ENST00000377050 L2HGDHQ9H9P8 463 aa12.7□□□□□ -0.38
UBD-203ENST00000377050 OGFRQ9NZT2 677 aa12.7□□□□□ -0.38
UBD-203ENST00000377050 DACH1Q9UI36 760 aa12.7□□□□□ -0.38
UBD-203ENST00000377050 UFL1O94874 794 aa12.69□□□□□ -0.38
UBD-203ENST00000377050 MYCP01106 439 aaPredicted RBP12.69□□□□□ -0.38
UBD-203ENST00000377050 SFPQP23246 707 aaKnown RBP eCLIP12.69□□□□□ -0.38
UBD-203ENST00000377050 PHKA1P46020 1223 aa12.69□□□□□ -0.38
UBD-203ENST00000377050 FAM193AP78312 1265 aa12.69□□□□□ -0.38
UBD-203ENST00000377050 FANCCQ00597 558 aa12.69□□□□□ -0.38
UBD-203ENST00000377050 MYL5Q02045 173 aa12.69□□□□□ -0.38
UBD-203ENST00000377050 SART3Q15020 963 aaKnown RBP12.69□□□□□ -0.38
UBD-203ENST00000377050 SAFBQ15424 915 aaKnown RBP eCLIP12.69□□□□□ -0.38
UBD-203ENST00000377050 NBPF9Q3BBW0 867 aa12.69□□□□□ -0.38
UBD-203ENST00000377050 RILPL1Q5EBL4 403 aa12.69□□□□□ -0.38
UBD-203ENST00000377050 SHC4Q6S5L8 630 aa12.69□□□□□ -0.38
UBD-203ENST00000377050 APOBEC3FQ8IUX4 373 aaKnown RBP12.69□□□□□ -0.38
UBD-203ENST00000377050 SPATA5Q8NB90 893 aa12.69□□□□□ -0.38
UBD-203ENST00000377050 CELF1Q92879 486 aaKnown RBP12.69□□□□□ -0.38
UBD-203ENST00000377050 DCBLD2Q96PD2 775 aa12.69□□□□□ -0.38
UBD-203ENST00000377050 XPO4Q9C0E2 1151 aaKnown RBP12.69□□□□□ -0.38
UBD-203ENST00000377050 ZMYND15Q9H091 742 aa12.69□□□□□ -0.38
UBD-203ENST00000377050 TMX1Q9H3N1 280 aa12.69□□□□□ -0.38
UBD-203ENST00000377050 ANKIB1Q9P2G1 1089 aa12.69□□□□□ -0.38
UBD-203ENST00000377050 ANAPC4Q9UJX5 808 aa12.69□□□□□ -0.38
UBD-203ENST00000377050 CEP131Q9UPN4 1083 aa12.69□□□□□ -0.38
UBD-203ENST00000377050 SLC12A7Q9Y666 1083 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms