RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 CCL15-CCL14A0A0B4J2E2 113 aa24.56■■□□□ 1.52
HLA-C-201ENST00000376228 PRPF40AO75400 957 aaKnown RBP24.56■■□□□ 1.52
HLA-C-201ENST00000376228 RASA1P20936 1047 aa24.56■■□□□ 1.52
HLA-C-201ENST00000376228 CDK8P49336 464 aa24.56■■□□□ 1.52
HLA-C-201ENST00000376228 TFAP4Q01664 338 aa24.56■■□□□ 1.52
HLA-C-201ENST00000376228 CCL15Q16663 113 aa24.56■■□□□ 1.52
HLA-C-201ENST00000376228 CATIPQ7Z7H3 387 aa24.56■■□□□ 1.52
HLA-C-201ENST00000376228 RAB11FIP4Q86YS3 637 aa24.56■■□□□ 1.52
HLA-C-201ENST00000376228 R3HDMLQ9H3Y0 253 aa24.56■■□□□ 1.52
HLA-C-201ENST00000376228 MYH6P13533 1939 aa24.55■■□□□ 1.52
HLA-C-201ENST00000376228 GTF2A2P52657 109 aa24.55■■□□□ 1.52
HLA-C-201ENST00000376228 GABPAQ06546 454 aa24.55■■□□□ 1.52
HLA-C-201ENST00000376228 TROAPQ12815 778 aa24.55■■□□□ 1.52
HLA-C-201ENST00000376228 PPIL2Q13356 520 aa24.55■■□□□ 1.52
HLA-C-201ENST00000376228 CSPP1Q1MSJ5 1256 aa24.55■■□□□ 1.52
HLA-C-201ENST00000376228 SCYL3Q8IZE3 742 aa24.55■■□□□ 1.52
HLA-C-201ENST00000376228 BRI3BPQ8WY22 251 aa24.55■■□□□ 1.52
HLA-C-201ENST00000376228 MAP3K14Q99558 947 aa24.55■■□□□ 1.52
HLA-C-201ENST00000376228 MYL10Q9BUA6 226 aa24.55■■□□□ 1.52
HLA-C-201ENST00000376228 TBC1D12O60347 775 aa24.54■■□□□ 1.52
HLA-C-201ENST00000376228 RXRAP19793 462 aa24.54■■□□□ 1.52
HLA-C-201ENST00000376228 PPATQ06203 517 aa24.54■■□□□ 1.52
HLA-C-201ENST00000376228 FAM47AQ5JRC9 791 aa24.54■■□□□ 1.52
HLA-C-201ENST00000376228 RCSD1Q6JBY9 416 aa24.54■■□□□ 1.52
HLA-C-201ENST00000376228 FBXO18Q8NFZ0 1043 aa24.54■■□□□ 1.52
HLA-C-201ENST00000376228 CHAMP1Q96JM3 812 aa24.54■■□□□ 1.52
HLA-C-201ENST00000376228 DHX36Q9H2U1 1008 aaKnown RBP24.54■■□□□ 1.52
HLA-C-201ENST00000376228 RBM28Q9NW13 759 aaKnown RBP24.54■■□□□ 1.52
HLA-C-201ENST00000376228 PTPRFP10586 1907 aa24.53■■□□□ 1.52
HLA-C-201ENST00000376228 TESPA1A2RU30 521 aaPredicted RBP24.53■■□□□ 1.52
HLA-C-201ENST00000376228 FMNL1O95466 1100 aaPredicted RBP24.53■■□□□ 1.52
HLA-C-201ENST00000376228 NEDD1Q8NHV4 660 aa24.53■■□□□ 1.52
HLA-C-201ENST00000376228 C8orf76Q96K31 380 aa24.53■■□□□ 1.52
HLA-C-201ENST00000376228 IL17RBQ9NRM6 502 aa24.53■■□□□ 1.52
HLA-C-201ENST00000376228 PI4KBQ9UBF8 816 aa24.53■■□□□ 1.52
HLA-C-201ENST00000376228 SWAP70Q9UH65 585 aa24.53■■□□□ 1.52
HLA-C-201ENST00000376228 SSRP1Q08945 709 aaKnown RBP24.52■■□□□ 1.52
HLA-C-201ENST00000376228 ATL3Q6DD88 541 aa24.52■■□□□ 1.52
HLA-C-201ENST00000376228 CCDC84Q86UT8 332 aaPredicted RBP24.52■■□□□ 1.52
HLA-C-201ENST00000376228 WASF1Q92558 559 aa24.52■■□□□ 1.52
HLA-C-201ENST00000376228 EHD4Q9H223 541 aa24.52■■□□□ 1.52
HLA-C-201ENST00000376228 PICK1Q9NRD5 415 aa24.52■■□□□ 1.52
HLA-C-201ENST00000376228 DDX49Q9Y6V7 483 aaKnown RBP24.52■■□□□ 1.52
HLA-C-201ENST00000376228 PLIN4Q96Q06 1357 aa24.52■■□□□ 1.52
HLA-C-201ENST00000376228 CTNND1O60716 968 aaKnown RBP24.51■■□□□ 1.51
HLA-C-201ENST00000376228 MBD3O95983 291 aa24.51■■□□□ 1.51
HLA-C-201ENST00000376228 ALDH1A1P00352 501 aa24.51■■□□□ 1.51
HLA-C-201ENST00000376228 TSPY3P0CV98 308 aa24.51■■□□□ 1.51
HLA-C-201ENST00000376228 TSPY8P0CW00 308 aa24.51■■□□□ 1.51
HLA-C-201ENST00000376228 PTPRAP18433 802 aa24.51■■□□□ 1.51
HLA-C-201ENST00000376228 NOVP48745 357 aa24.51■■□□□ 1.51
HLA-C-201ENST00000376228 KRT85P78386 507 aa24.51■■□□□ 1.51
HLA-C-201ENST00000376228 DNM1Q05193 864 aaKnown RBP24.51■■□□□ 1.51
HLA-C-201ENST00000376228 SNAPC2Q13487 334 aa24.51■■□□□ 1.51
HLA-C-201ENST00000376228 RRP1BQ14684 758 aaKnown RBP24.51■■□□□ 1.51
HLA-C-201ENST00000376228 GSE1Q14687 1217 aa24.51■■□□□ 1.51
HLA-C-201ENST00000376228 NBPF11Q86T75 865 aa24.51■■□□□ 1.51
HLA-C-201ENST00000376228 FERMT3Q86UX7 667 aa24.51■■□□□ 1.51
HLA-C-201ENST00000376228 DNAJC18Q9H819 358 aa24.51■■□□□ 1.51
HLA-C-201ENST00000376228 CNPY2Q9Y2B0 182 aa24.51■■□□□ 1.51
HLA-C-201ENST00000376228 CCDC144CPQ8IYA2 1237 aa24.51■■□□□ 1.51
HLA-C-201ENST00000376228 FAM43AQ8N2R8 423 aa24.51■■□□□ 1.51
HLA-C-201ENST00000376228 CRACR2BQ8N4Y2 399 aaPredicted RBP24.51■■□□□ 1.51
HLA-C-201ENST00000376228 SLC44A5Q8NCS7 719 aa24.51■■□□□ 1.51
HLA-C-201ENST00000376228 HERC5Q9UII4 1024 aaKnown RBP24.51■■□□□ 1.51
HLA-C-201ENST00000376228 ELP1O95163 1332 aa24.5■■□□□ 1.51
HLA-C-201ENST00000376228 HLA-DOAP06340 250 aa24.5■■□□□ 1.51
HLA-C-201ENST00000376228 CETPP11597 493 aa24.5■■□□□ 1.51
HLA-C-201ENST00000376228 OTUD7BQ6GQQ9 843 aa24.5■■□□□ 1.51
HLA-C-201ENST00000376228 TRIM22Q8IYM9 498 aa24.5■■□□□ 1.51
HLA-C-201ENST00000376228 NUP133Q8WUM0 1156 aa24.5■■□□□ 1.51
HLA-C-201ENST00000376228 RNF26Q9BY78 433 aaPredicted RBP24.5■■□□□ 1.51
HLA-C-201ENST00000376228 TRIM34Q9BYJ4 488 aa24.5■■□□□ 1.51
HLA-C-201ENST00000376228 ZHX2Q9Y6X8 837 aa24.5■■□□□ 1.51
HLA-C-201ENST00000376228 NMT2O60551 498 aa24.49■■□□□ 1.51
HLA-C-201ENST00000376228 CRHR2Q13324 411 aa24.49■■□□□ 1.51
HLA-C-201ENST00000376228 ZNF296Q8WUU4 475 aaPredicted RBP24.49■■□□□ 1.51
HLA-C-201ENST00000376228 ALG1Q9BT22 464 aa24.49■■□□□ 1.51
HLA-C-201ENST00000376228 SCAND2PQ9GZW5 306 aaPredicted RBP24.49■■□□□ 1.51
HLA-C-201ENST00000376228 SERPINB13Q9UIV8 391 aa24.49■■□□□ 1.51
HLA-C-201ENST00000376228 GREB1LQ9C091 1923 aaPredicted RBP24.49■■□□□ 1.51
HLA-C-201ENST00000376228 GPR25O00155 361 aa24.48■■□□□ 1.51
HLA-C-201ENST00000376228 DEXIO95424 95 aa24.48■■□□□ 1.51
HLA-C-201ENST00000376228 FUT2Q10981 343 aa24.48■■□□□ 1.51
HLA-C-201ENST00000376228 FOXD4L6Q3SYB3 417 aaPredicted RBP24.48■■□□□ 1.51
HLA-C-201ENST00000376228 FOXD4L3Q6VB84 417 aaPredicted RBP24.48■■□□□ 1.51
HLA-C-201ENST00000376228 PHKBQ93100 1093 aa24.48■■□□□ 1.51
HLA-C-201ENST00000376228 CFHR5Q9BXR6 569 aa24.48■■□□□ 1.51
HLA-C-201ENST00000376228 KCNH4Q9UQ05 1017 aa24.48■■□□□ 1.51
HLA-C-201ENST00000376228 BTBD19C9JJ37 291 aa24.47■■□□□ 1.51
HLA-C-201ENST00000376228 CAP2P40123 477 aa24.47■■□□□ 1.51
HLA-C-201ENST00000376228 SHROOM1Q2M3G4 852 aaPredicted RBP24.47■■□□□ 1.51
HLA-C-201ENST00000376228 KAT14Q9H8E8 782 aa24.47■■□□□ 1.51
HLA-C-201ENST00000376228 NCLP19338 710 aaKnown RBP24.46■■□□□ 1.51
HLA-C-201ENST00000376228 BRAPQ7Z569 592 aa24.46■■□□□ 1.51
HLA-C-201ENST00000376228 FOXP4Q8IVH2 680 aaPredicted RBP24.46■■□□□ 1.51
HLA-C-201ENST00000376228 CTCFLQ8NI51 663 aaPredicted RBP24.46■■□□□ 1.51
HLA-C-201ENST00000376228 SLC26A6Q9BXS9 759 aa24.46■■□□□ 1.51
HLA-C-201ENST00000376228 CFAP45Q9UL16 551 aa24.46■■□□□ 1.51
HLA-C-201ENST00000376228 TRIM75PA6NK02 468 aa24.45■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms