RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 MAP3K15Q6ZN16 1313 aa13.28□□□□□ -0.28
MCF2L-202ENST00000375597 TTC26A0AVF1 554 aa13.27□□□□□ -0.28
MCF2L-202ENST00000375597 PDE8AO60658 829 aa13.27□□□□□ -0.28
MCF2L-202ENST00000375597 EIF3JO75822 258 aaKnown RBP13.27□□□□□ -0.28
MCF2L-202ENST00000375597 PLEKP08567 350 aaPredicted RBP13.27□□□□□ -0.28
MCF2L-202ENST00000375597 PRCPP42785 496 aa13.27□□□□□ -0.28
MCF2L-202ENST00000375597 NR1I3Q14994 352 aa13.27□□□□□ -0.28
MCF2L-202ENST00000375597 UBE3CQ15386 1083 aa13.27□□□□□ -0.28
MCF2L-202ENST00000375597 EZH2Q15910 746 aaKnown RBP13.27□□□□□ -0.28
MCF2L-202ENST00000375597 HDXQ7Z353 690 aa13.27□□□□□ -0.28
MCF2L-202ENST00000375597 CCDC148Q8NFR7 591 aa13.27□□□□□ -0.28
MCF2L-202ENST00000375597 SHISA4Q96DD7 197 aa13.27□□□□□ -0.28
MCF2L-202ENST00000375597 LUC7L2Q9Y383 392 aaKnown RBP13.27□□□□□ -0.28
MCF2L-202ENST00000375597 ESYT3A0FGR9 886 aa13.27□□□□□ -0.28
MCF2L-202ENST00000375597 UQCRFS1P1P0C7P4 283 aa13.27□□□□□ -0.28
MCF2L-202ENST00000375597 CACNB1Q02641 598 aaPredicted RBP13.27□□□□□ -0.28
MCF2L-202ENST00000375597 IFT81Q8WYA0 676 aa13.27□□□□□ -0.28
MCF2L-202ENST00000375597 MMS19Q96T76 1030 aa13.27□□□□□ -0.28
MCF2L-202ENST00000375597 MKNK2Q9HBH9 465 aa13.27□□□□□ -0.28
MCF2L-202ENST00000375597 NLRC4Q9NPP4 1024 aa13.27□□□□□ -0.28
MCF2L-202ENST00000375597 MYO6Q9UM54 1294 aa13.27□□□□□ -0.28
MCF2L-202ENST00000375597 SRPRBQ9Y5M8 271 aaKnown RBP13.27□□□□□ -0.28
MCF2L-202ENST00000375597 LRRIQ3A6PVS8 624 aaPredicted RBP13.27□□□□□ -0.29
MCF2L-202ENST00000375597 NCK2O43639 380 aa13.27□□□□□ -0.29
MCF2L-202ENST00000375597 USP17L8P0C7I0 530 aa13.27□□□□□ -0.29
MCF2L-202ENST00000375597 LRRC41Q15345 812 aa13.27□□□□□ -0.29
MCF2L-202ENST00000375597 MARCH10Q8NA82 808 aaPredicted RBP13.27□□□□□ -0.29
MCF2L-202ENST00000375597 CNNM2Q9H8M5 875 aa13.27□□□□□ -0.29
MCF2L-202ENST00000375597 SLC39A2Q9NP94 309 aa13.27□□□□□ -0.29
MCF2L-202ENST00000375597 USP17L3A6NCW0 530 aa13.26□□□□□ -0.29
MCF2L-202ENST00000375597 USP17L4A6NCW7 530 aa13.26□□□□□ -0.29
MCF2L-202ENST00000375597 NKRFO15226 690 aaKnown RBP eCLIP13.26□□□□□ -0.29
MCF2L-202ENST00000375597 USP17L1Q7RTZ2 530 aa13.26□□□□□ -0.29
MCF2L-202ENST00000375597 STAG2Q8N3U4 1231 aa13.26□□□□□ -0.29
MCF2L-202ENST00000375597 IQUBQ8NA54 791 aa13.26□□□□□ -0.29
MCF2L-202ENST00000375597 ZSCAN10Q96SZ4 725 aaPredicted RBP13.26□□□□□ -0.29
MCF2L-202ENST00000375597 RRP15Q9Y3B9 282 aaKnown RBP13.26□□□□□ -0.29
MCF2L-202ENST00000375597 GOLGA6L9A6NEM1 432 aa13.26□□□□□ -0.29
MCF2L-202ENST00000375597 F8W031 263 aaPredicted RBP13.26□□□□□ -0.29
MCF2L-202ENST00000375597 PRDX5P30044 214 aa13.26□□□□□ -0.29
MCF2L-202ENST00000375597 TBC1D8BQ0IIM8 1120 aa13.26□□□□□ -0.29
MCF2L-202ENST00000375597 CCDC181Q5TID7 509 aa13.26□□□□□ -0.29
MCF2L-202ENST00000375597 MICALL1Q8N3F8 863 aa13.26□□□□□ -0.29
MCF2L-202ENST00000375597 GPATCH11Q8N954 259 aa13.26□□□□□ -0.29
MCF2L-202ENST00000375597 EPN1Q9Y6I3 576 aaPredicted RBP13.26□□□□□ -0.29
MCF2L-202ENST00000375597 MDM2Q00987 491 aaPredicted RBP13.26□□□□□ -0.29
MCF2L-202ENST00000375597 SND1Q7KZF4 910 aaKnown RBP eCLIP13.26□□□□□ -0.29
MCF2L-202ENST00000375597 CNGA4Q8IV77 575 aa13.26□□□□□ -0.29
MCF2L-202ENST00000375597 CSGALNACT2Q8N6G5 542 aa13.26□□□□□ -0.29
MCF2L-202ENST00000375597 CCDC155Q8N6L0 562 aa13.26□□□□□ -0.29
MCF2L-202ENST00000375597 RASSF4Q9H2L5 321 aa13.26□□□□□ -0.29
MCF2L-202ENST00000375597 ABHD10Q9NUJ1 306 aa13.26□□□□□ -0.29
MCF2L-202ENST00000375597 CWC15Q9P013 229 aaKnown RBP13.26□□□□□ -0.29
MCF2L-202ENST00000375597 ADD3Q9UEY8 706 aaKnown RBP13.26□□□□□ -0.29
MCF2L-202ENST00000375597 FEZ2Q9UHY8 353 aaPredicted RBP13.26□□□□□ -0.29
MCF2L-202ENST00000375597 RNF40O75150 1001 aa13.25□□□□□ -0.29
MCF2L-202ENST00000375597 LIG3P49916 1009 aa13.25□□□□□ -0.29
MCF2L-202ENST00000375597 CEP112Q8N8E3 955 aa13.25□□□□□ -0.29
MCF2L-202ENST00000375597 SLC4A9Q96Q91 983 aa13.25□□□□□ -0.29
MCF2L-202ENST00000375597 MLXIPQ9HAP2 919 aa13.25□□□□□ -0.29
MCF2L-202ENST00000375597 ZNHIT6Q9NWK9 470 aaKnown RBP13.25□□□□□ -0.29
MCF2L-202ENST00000375597 AKR1B10O60218 316 aa13.25□□□□□ -0.29
MCF2L-202ENST00000375597 DIXDC1Q155Q3 683 aa13.25□□□□□ -0.29
MCF2L-202ENST00000375597 SRBD1Q8N5C6 995 aaKnown RBP13.25□□□□□ -0.29
MCF2L-202ENST00000375597 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.25□□□□□ -0.29
MCF2L-202ENST00000375597 RNF41Q9H4P4 317 aaPredicted RBP13.25□□□□□ -0.29
MCF2L-202ENST00000375597 BACH1O14867 736 aa13.25□□□□□ -0.29
MCF2L-202ENST00000375597 PARP1P09874 1014 aaKnown RBP13.25□□□□□ -0.29
MCF2L-202ENST00000375597 FCER1AP12319 257 aa13.25□□□□□ -0.29
MCF2L-202ENST00000375597 ZNF18P17022 549 aa13.25□□□□□ -0.29
MCF2L-202ENST00000375597 GUCY2FP51841 1108 aa13.25□□□□□ -0.29
MCF2L-202ENST00000375597 LACRTQ9GZZ8 138 aa13.25□□□□□ -0.29
MCF2L-202ENST00000375597 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.25□□□□□ -0.29
MCF2L-202ENST00000375597 BCCIPQ9P287 314 aaKnown RBP eCLIP13.25□□□□□ -0.29
MCF2L-202ENST00000375597 PACSIN2Q9UNF0 486 aaPredicted RBP13.25□□□□□ -0.29
MCF2L-202ENST00000375597 XDHP47989 1333 aa13.24□□□□□ -0.29
MCF2L-202ENST00000375597 NFAT5O94916 1531 aa13.24□□□□□ -0.29
MCF2L-202ENST00000375597 PHRF1Q9P1Y6 1649 aaKnown RBP13.24□□□□□ -0.29
MCF2L-202ENST00000375597 A0A1B0GTH6 734 aa13.24□□□□□ -0.29
MCF2L-202ENST00000375597 RPN1P04843 607 aaKnown RBP13.24□□□□□ -0.29
MCF2L-202ENST00000375597 TECP42680 631 aa13.24□□□□□ -0.29
MCF2L-202ENST00000375597 TXKP42681 527 aa13.24□□□□□ -0.29
MCF2L-202ENST00000375597 C2CD5Q86YS7 1000 aa13.24□□□□□ -0.29
MCF2L-202ENST00000375597 JAKMIP2Q96AA8 810 aa13.24□□□□□ -0.29
MCF2L-202ENST00000375597 RUFY1Q96T51 708 aa13.24□□□□□ -0.29
MCF2L-202ENST00000375597 UBA5Q9GZZ9 404 aa13.24□□□□□ -0.29
MCF2L-202ENST00000375597 CHD2O14647 1828 aaKnown RBP13.24□□□□□ -0.29
MCF2L-202ENST00000375597 PPP1R3GB7ZBB8 358 aa13.24□□□□□ -0.29
MCF2L-202ENST00000375597 TFAP4Q01664 338 aa13.24□□□□□ -0.29
MCF2L-202ENST00000375597 APBA1Q02410 837 aa13.24□□□□□ -0.29
MCF2L-202ENST00000375597 PDE4DQ08499 809 aa13.24□□□□□ -0.29
MCF2L-202ENST00000375597 SPTY2D1Q68D10 685 aaPredicted RBP13.24□□□□□ -0.29
MCF2L-202ENST00000375597 CYP26C1Q6V0L0 522 aa13.24□□□□□ -0.29
MCF2L-202ENST00000375597 DZIP1Q86YF9 867 aaKnown RBP13.24□□□□□ -0.29
MCF2L-202ENST00000375597 CLEC10AQ8IUN9 316 aa13.24□□□□□ -0.29
MCF2L-202ENST00000375597 KSR1Q8IVT5 923 aa13.24□□□□□ -0.29
MCF2L-202ENST00000375597 FOXP1Q9H334 677 aaPredicted RBP13.24□□□□□ -0.29
MCF2L-202ENST00000375597 CCT5P48643 541 aa13.23□□□□□ -0.29
MCF2L-202ENST00000375597 KANK3Q6NY19 840 aa13.23□□□□□ -0.29
MCF2L-202ENST00000375597 C3orf67Q6ZVT6 689 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms