RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 PARP1P09874 1014 aaKnown RBP11.22□□□□□ -0.61
PTCH1-204ENST00000375290 ESRRGP62508 458 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 ANGPTL2Q9UKU9 493 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 USP19O94966 1318 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 IRX1P78414 480 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-204ENST00000375290 ADCY2Q08462 1091 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 PUM3Q15397 648 aaKnown RBP11.22□□□□□ -0.61
PTCH1-204ENST00000375290 ANKRD20A4Q4UJ75 823 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 ANKRD20A8PQ5CZ79 823 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 ANKRD20A2Q5SQ80 823 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 ANKRD20A1Q5TYW2 823 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 PPP1R9AQ9ULJ8 1098 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 HAND2P61296 217 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 PDE11AQ9HCR9 933 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 CARMIL3Q8ND23 1372 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 MYO1CO00159 1063 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 TSPYL2Q9H2G4 693 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-204ENST00000375290 NOC2LQ9Y3T9 749 aaKnown RBP11.22□□□□□ -0.61
PTCH1-204ENST00000375290 PODXLO00592 558 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 MGEA5O60502 916 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 CCT6AP40227 531 aaKnown RBP11.22□□□□□ -0.61
PTCH1-204ENST00000375290 SLC4A8Q2Y0W8 1093 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 MPRIPQ6WCQ1 1025 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 CCDC105Q8IYK2 499 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 NME8Q8N427 588 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 ENOX1Q8TC92 643 aaKnown RBP11.22□□□□□ -0.61
PTCH1-204ENST00000375290 MRPL40Q9NQ50 206 aaKnown RBP11.22□□□□□ -0.61
PTCH1-204ENST00000375290 ASIC3Q9UHC3 531 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 PCDH11XQ9BZA7 1347 aa11.21□□□□□ -0.61
PTCH1-204ENST00000375290 PCDH11YQ9BZA8 1340 aa11.21□□□□□ -0.61
PTCH1-204ENST00000375290 MBD5Q9P267 1494 aa11.21□□□□□ -0.61
PTCH1-204ENST00000375290 OLFM3Q96PB7 478 aa11.21□□□□□ -0.61
PTCH1-204ENST00000375290 SH3GL3Q99963 347 aa11.21□□□□□ -0.61
PTCH1-204ENST00000375290 LMBR1LQ6UX01 489 aa11.21□□□□□ -0.61
PTCH1-204ENST00000375290 OSBPL5Q9H0X9 879 aaPredicted RBP11.21□□□□□ -0.61
PTCH1-204ENST00000375290 DDAH1O94760 285 aa11.21□□□□□ -0.61
PTCH1-204ENST00000375290 CAV1Q03135 178 aa11.21□□□□□ -0.61
PTCH1-204ENST00000375290 PLCD3Q8N3E9 789 aa11.21□□□□□ -0.61
PTCH1-204ENST00000375290 KRT15P19012 456 aa11.21□□□□□ -0.61
PTCH1-204ENST00000375290 CYP7A1P22680 504 aa11.21□□□□□ -0.61
PTCH1-204ENST00000375290 PSMC4P43686 418 aa11.21□□□□□ -0.61
PTCH1-204ENST00000375290 STRN3Q13033 797 aa11.21□□□□□ -0.61
PTCH1-204ENST00000375290 LRRC23Q53EV4 343 aaPredicted RBP11.21□□□□□ -0.61
PTCH1-204ENST00000375290 PPCSQ9HAB8 311 aa11.21□□□□□ -0.61
PTCH1-204ENST00000375290 SMIM24O75264 130 aa11.21□□□□□ -0.62
PTCH1-204ENST00000375290 NR1I2O75469 434 aa11.21□□□□□ -0.62
PTCH1-204ENST00000375290 EEF2P13639 858 aaKnown RBP11.21□□□□□ -0.62
PTCH1-204ENST00000375290 PDE6CP51160 858 aa11.21□□□□□ -0.62
PTCH1-204ENST00000375290 NONOQ15233 471 aaKnown RBP eCLIP11.21□□□□□ -0.62
PTCH1-204ENST00000375290 NRBF2Q96F24 287 aa11.21□□□□□ -0.62
PTCH1-204ENST00000375290 RIPOR2Q9Y4F9 1068 aa11.21□□□□□ -0.62
PTCH1-204ENST00000375290 CEP104O60308 925 aa11.21□□□□□ -0.62
PTCH1-204ENST00000375290 PNMA6AP0CW24 399 aaPredicted RBP11.21□□□□□ -0.62
PTCH1-204ENST00000375290 PFKFB1P16118 471 aa11.21□□□□□ -0.62
PTCH1-204ENST00000375290 VSTM4Q8IW00 320 aa11.21□□□□□ -0.62
PTCH1-204ENST00000375290 SAMM50Q9Y512 469 aa11.21□□□□□ -0.62
PTCH1-204ENST00000375290 SLFN12Q8IYM2 578 aa11.21□□□□□ -0.62
PTCH1-204ENST00000375290 EFHD1Q9BUP0 239 aa11.21□□□□□ -0.62
PTCH1-204ENST00000375290 ASPHQ12797 758 aa11.21□□□□□ -0.62
PTCH1-204ENST00000375290 SKAP1Q86WV1 359 aa11.21□□□□□ -0.62
PTCH1-204ENST00000375290 DDX27Q96GQ7 796 aaKnown RBP11.21□□□□□ -0.62
PTCH1-204ENST00000375290 C19orf44Q9H6X5 657 aa11.21□□□□□ -0.62
PTCH1-204ENST00000375290 ARPP21Q9UBL0 812 aaPredicted RBP11.21□□□□□ -0.62
PTCH1-204ENST00000375290 CDK12Q9NYV4 1490 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-204ENST00000375290 GIPC1O14908 333 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 DBN1Q16643 649 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 MUM1L1Q5H9M0 696 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 SRRM1Q8IYB3 904 aaKnown RBP11.2□□□□□ -0.62
PTCH1-204ENST00000375290 NCAPGQ9BPX3 1015 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 TNRQ92752 1358 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 DDX54Q8TDD1 881 aaKnown RBP11.2□□□□□ -0.62
PTCH1-204ENST00000375290 RCOR1Q9UKL0 485 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 KRT40Q6A162 431 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 GRAMD1AQ96CP6 724 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 SAAL1Q96ER3 474 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 STOML1Q9UBI4 398 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 RWDD2AQ9UIY3 292 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 BPIFB4P59827 614 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 C6orf118Q5T5N4 469 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 ADCY10Q96PN6 1610 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 TET3O43151 1660 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 PDCD2Q16342 344 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-204ENST00000375290 AOC3Q16853 763 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 ARL6IP4Q66PJ3 421 aaKnown RBP11.2□□□□□ -0.62
PTCH1-204ENST00000375290 CADPS2Q86UW7 1296 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 MAP4K1Q92918 833 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 ATG3Q9NT62 314 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 STK17AQ9UEE5 414 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 GRID2IPA4D2P6 1211 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 PGRMC1O00264 195 aaKnown RBP11.2□□□□□ -0.62
PTCH1-204ENST00000375290 PSMD2Q13200 908 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 ME3Q16798 604 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 RNF26Q9BY78 433 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-204ENST00000375290 IQGAP3Q86VI3 1631 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 CLCN6P51797 869 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 CCDC25Q86WR0 208 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 ZNF579Q8NAF0 562 aaKnown RBP11.2□□□□□ -0.62
PTCH1-204ENST00000375290 AGTPBP1Q9UPW5 1226 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 KRIT1O00522 736 aa11.2□□□□□ -0.62
PTCH1-204ENST00000375290 ANXA13P27216 316 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms