RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 NWD2Q9ULI1 1742 aa8.93□□□□□ -0.98
USP48-203ENST00000374732 GOLGA6L10A0A0M3HER8 536 aa8.93□□□□□ -0.98
USP48-203ENST00000374732 MTHFD1P11586 935 aaKnown RBP8.93□□□□□ -0.98
USP48-203ENST00000374732 GCKP35557 465 aa8.93□□□□□ -0.98
USP48-203ENST00000374732 IMMTQ16891 758 aaKnown RBP8.93□□□□□ -0.98
USP48-203ENST00000374732 CDCA7LQ96GN5 454 aa8.93□□□□□ -0.98
USP48-203ENST00000374732 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.93□□□□□ -0.98
USP48-203ENST00000374732 RIMKLBQ9ULI2 386 aa8.93□□□□□ -0.98
USP48-203ENST00000374732 CEP131Q9UPN4 1083 aa8.93□□□□□ -0.98
USP48-203ENST00000374732 RIMS2Q9UQ26 1411 aa8.93□□□□□ -0.98
USP48-203ENST00000374732 ENO4A6NNW6 628 aa8.92□□□□□ -0.98
USP48-203ENST00000374732 AKR1B15C9JRZ8 316 aaPredicted RBP8.92□□□□□ -0.98
USP48-203ENST00000374732 MASP1P48740 699 aa8.92□□□□□ -0.98
USP48-203ENST00000374732 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.92□□□□□ -0.98
USP48-203ENST00000374732 ARHGEF2Q92974 986 aaKnown RBP8.92□□□□□ -0.98
USP48-203ENST00000374732 PCMTD1Q96MG8 357 aaPredicted RBP8.92□□□□□ -0.98
USP48-203ENST00000374732 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.92□□□□□ -0.981e-14■■□□□ 12
USP48-203ENST00000374732 KIF9Q9HAQ2 790 aa8.92□□□□□ -0.98
USP48-203ENST00000374732 PLEKHH1Q9ULM0 1364 aa8.92□□□□□ -0.98
USP48-203ENST00000374732 TECPR2O15040 1411 aa8.92□□□□□ -0.98
USP48-203ENST00000374732 NSD3Q9BZ95 1437 aa8.92□□□□□ -0.98
USP48-203ENST00000374732 CGNL1Q0VF96 1302 aa8.92□□□□□ -0.98
USP48-203ENST00000374732 PPP1R12BO60237 982 aaPredicted RBP8.92□□□□□ -0.98
USP48-203ENST00000374732 PRPF40AO75400 957 aaKnown RBP8.92□□□□□ -0.98
USP48-203ENST00000374732 SH2D4BQ5SQS7 431 aa8.92□□□□□ -0.98
USP48-203ENST00000374732 GIGYF2Q6Y7W6 1299 aaKnown RBP8.92□□□□□ -0.98
USP48-203ENST00000374732 VCX3BQ9H321 246 aa8.92□□□□□ -0.98
USP48-203ENST00000374732 FBXO2Q9UK22 296 aaPredicted RBP8.92□□□□□ -0.98
USP48-203ENST00000374732 DLC1Q96QB1 1528 aa8.92□□□□□ -0.98
USP48-203ENST00000374732 SART1O43290 800 aaKnown RBP8.91□□□□□ -0.98
USP48-203ENST00000374732 ZNF254O75437 659 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 ENDOUP21128 410 aaKnown RBP8.91□□□□□ -0.98
USP48-203ENST00000374732 ELF1P32519 619 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 TNNI3KQ59H18 835 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 EMC10Q5UCC4 262 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 IQCA1Q86XH1 822 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 NBPF15Q8N660 670 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 KIF18AQ8NI77 898 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 SLC35B4Q969S0 331 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 RBM18Q96H35 190 aaKnown RBP8.91□□□□□ -0.98
USP48-203ENST00000374732 OSBPL2Q9H1P3 480 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 KANSL2Q9H9L4 492 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 BCL2L12Q9HB09 334 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 DDX21Q9NR30 783 aaKnown RBP eCLIP8.91□□□□□ -0.98
USP48-203ENST00000374732 FAM177BA6PVY3 158 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 KDM1AO60341 852 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 GCFC2P16383 781 aaKnown RBP8.91□□□□□ -0.98
USP48-203ENST00000374732 DNAJB2P25686 324 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 CDC25CP30307 473 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 MAGEA9P43362 315 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 PPM1FP49593 454 aaPredicted RBP8.91□□□□□ -0.98
USP48-203ENST00000374732 AP2B1P63010 937 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 Q4G0T1 1027 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 VWA3BQ502W6 1294 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 CCDC122Q5T0U0 273 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 PHLDB3Q6NSJ2 640 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 MICALCLQ6ZW33 695 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 NUTM1Q86Y26 1132 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 ANKRD42Q8N9B4 389 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 PPHLN1Q8NEY8 458 aaKnown RBP8.91□□□□□ -0.98
USP48-203ENST00000374732 FAM81AQ8TBF8 368 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 MIPOL1Q8TD10 442 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 TRIM4Q9C037 500 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.91□□□□□ -0.98
USP48-203ENST00000374732 ADGRL3Q9HAR2 1447 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 RTN3O95197 1032 aaPredicted RBP8.91□□□□□ -0.98
USP48-203ENST00000374732 CASP2P42575 452 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 SEPHS1P49903 392 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 SLFN5Q08AF3 891 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 VPS72Q15906 364 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 TMEM132EQ6IEE7 984 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 OSTM1Q86WC4 334 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 BRSK1Q8TDC3 778 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 ATP6V1E2Q96A05 226 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 FAM161BQ96MY7 647 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 FNBP1Q96RU3 617 aa8.91□□□□□ -0.98
USP48-203ENST00000374732 ADGRB2O60241 1585 aa8.9□□□□□ -0.98
USP48-203ENST00000374732 KIF2AO00139 706 aaPredicted RBP8.9□□□□□ -0.98
USP48-203ENST00000374732 NDUFV2P19404 249 aa8.9□□□□□ -0.98
USP48-203ENST00000374732 ARPC4P59998 168 aa8.9□□□□□ -0.98
USP48-203ENST00000374732 WDR45BQ5MNZ6 344 aa8.9□□□□□ -0.98
USP48-203ENST00000374732 FAM83BQ5T0W9 1011 aa8.9□□□□□ -0.98
USP48-203ENST00000374732 NAA16Q6N069 864 aaPredicted RBP8.9□□□□□ -0.98
USP48-203ENST00000374732 CCDC129Q6ZRS4 1044 aa8.9□□□□□ -0.98
USP48-203ENST00000374732 CEP68Q76N32 757 aa8.9□□□□□ -0.98
USP48-203ENST00000374732 FAM9CQ8IZT9 166 aa8.9□□□□□ -0.98
USP48-203ENST00000374732 ANKRD7Q92527 254 aa8.9□□□□□ -0.98
USP48-203ENST00000374732 PRIMPOLQ96LW4 560 aa8.9□□□□□ -0.98
USP48-203ENST00000374732 CCDC114Q96M63 670 aa8.9□□□□□ -0.98
USP48-203ENST00000374732 HELLSQ9NRZ9 838 aa8.9□□□□□ -0.98
USP48-203ENST00000374732 MST1RQ04912 1400 aa8.9□□□□□ -0.98
USP48-203ENST00000374732 TMEM94Q12767 1356 aa8.9□□□□□ -0.98
USP48-203ENST00000374732 FAM221BA6H8Z2 402 aa8.9□□□□□ -0.99
USP48-203ENST00000374732 M0QX08 132 aa8.9□□□□□ -0.99
USP48-203ENST00000374732 FDX1P10109 184 aa8.9□□□□□ -0.99
USP48-203ENST00000374732 NEK2P51955 445 aa8.9□□□□□ -0.99
USP48-203ENST00000374732 LAPTM5Q13571 262 aa8.9□□□□□ -0.99
USP48-203ENST00000374732 RABEP1Q15276 862 aa8.9□□□□□ -0.99
USP48-203ENST00000374732 SLFNL1Q499Z3 407 aa8.9□□□□□ -0.99
USP48-203ENST00000374732 JAMLQ86YT9 394 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms