RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 ASPRV1Q53RT3 343 aa18.13■□□□□ 0.49
NIPAL3-204ENST00000374399 PPP4R3BQ5MIZ7 849 aa18.13■□□□□ 0.49
NIPAL3-204ENST00000374399 ANGEL2Q5VTE6 544 aaKnown RBP18.13■□□□□ 0.49
NIPAL3-204ENST00000374399 PGBD1Q96JS3 809 aa18.13■□□□□ 0.49
NIPAL3-204ENST00000374399 UBA5Q9GZZ9 404 aa18.13■□□□□ 0.49
NIPAL3-204ENST00000374399 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.13■□□□□ 0.49
NIPAL3-204ENST00000374399 ZBTB21Q9ULJ3 1066 aa18.13■□□□□ 0.49
NIPAL3-204ENST00000374399 CAP2P40123 477 aa18.12■□□□□ 0.49
NIPAL3-204ENST00000374399 ATL3Q6DD88 541 aa18.12■□□□□ 0.49
NIPAL3-204ENST00000374399 TTBK2Q6IQ55 1244 aa18.12■□□□□ 0.49
NIPAL3-204ENST00000374399 GPKOWQ92917 476 aaPredicted RBP eCLIP18.12■□□□□ 0.49
NIPAL3-204ENST00000374399 TNFRSF25Q93038 417 aa18.12■□□□□ 0.49
NIPAL3-204ENST00000374399 SPATA32Q96LK8 384 aa18.12■□□□□ 0.49
NIPAL3-204ENST00000374399 FOXP1Q9H334 677 aaPredicted RBP18.12■□□□□ 0.49
NIPAL3-204ENST00000374399 RBM27Q9P2N5 1060 aaKnown RBP18.12■□□□□ 0.49
NIPAL3-204ENST00000374399 CLIC4Q9Y696 253 aa18.12■□□□□ 0.49
NIPAL3-204ENST00000374399 UBE2HP62256 183 aa18.12■□□□□ 0.49
NIPAL3-204ENST00000374399 CEBPZQ03701 1054 aaKnown RBP18.12■□□□□ 0.49
NIPAL3-204ENST00000374399 WWC2Q6AWC2 1192 aa18.12■□□□□ 0.49
NIPAL3-204ENST00000374399 NOSTRINQ8IVI9 506 aa18.12■□□□□ 0.49
NIPAL3-204ENST00000374399 ZNF396Q96N95 335 aaPredicted RBP18.12■□□□□ 0.49
NIPAL3-204ENST00000374399 GZF1Q9H116 711 aaPredicted RBP18.12■□□□□ 0.49
NIPAL3-204ENST00000374399 CABP5Q9NP86 173 aa18.12■□□□□ 0.49
NIPAL3-204ENST00000374399 RTEL1Q9NZ71 1219 aa18.12■□□□□ 0.49
NIPAL3-204ENST00000374399 CFAP45Q9UL16 551 aa18.12■□□□□ 0.49
NIPAL3-204ENST00000374399 ECE1P42892 770 aa18.11■□□□□ 0.49
NIPAL3-204ENST00000374399 TOB1P50616 345 aaPredicted RBP18.11■□□□□ 0.49
NIPAL3-204ENST00000374399 EARS2Q5JPH6 523 aaKnown RBP18.11■□□□□ 0.49
NIPAL3-204ENST00000374399 NBPF12Q5TAG4 269 aaPredicted RBP18.11■□□□□ 0.49
NIPAL3-204ENST00000374399 GMCL1P1Q8NEA9 526 aa18.11■□□□□ 0.49
NIPAL3-204ENST00000374399 ACER1Q8TDN7 264 aa18.11■□□□□ 0.49
NIPAL3-204ENST00000374399 PIGSQ96S52 555 aa18.11■□□□□ 0.49
NIPAL3-204ENST00000374399 GPCPD1Q9NPB8 672 aa18.11■□□□□ 0.49
NIPAL3-204ENST00000374399 F5H6K3 240 aa18.1■□□□□ 0.49
NIPAL3-204ENST00000374399 STXBP3O00186 592 aa18.1■□□□□ 0.49
NIPAL3-204ENST00000374399 NASPP49321 788 aaPredicted RBP18.1■□□□□ 0.49
NIPAL3-204ENST00000374399 KLRC3Q07444 240 aa18.1■□□□□ 0.49
NIPAL3-204ENST00000374399 CSPP1Q1MSJ5 1256 aa18.1■□□□□ 0.49
NIPAL3-204ENST00000374399 NOM1Q5C9Z4 860 aaKnown RBP18.1■□□□□ 0.49
NIPAL3-204ENST00000374399 KIAA1755Q5JYT7 1200 aa18.1■□□□□ 0.49
NIPAL3-204ENST00000374399 KCTD1Q719H9 257 aa18.1■□□□□ 0.49
NIPAL3-204ENST00000374399 SH3GLB2Q9NR46 395 aa18.1■□□□□ 0.49
NIPAL3-204ENST00000374399 POLR3EQ9NVU0 708 aa18.1■□□□□ 0.49
NIPAL3-204ENST00000374399 GGA3Q9NZ52 723 aa18.1■□□□□ 0.49
NIPAL3-204ENST00000374399 SSC5DA1L4H1 1573 aa18.09■□□□□ 0.49
NIPAL3-204ENST00000374399 FAM205CA6NFA0 338 aa18.09■□□□□ 0.49
NIPAL3-204ENST00000374399 MBD3O95983 291 aa18.09■□□□□ 0.49
NIPAL3-204ENST00000374399 PRAMEF18Q5VWM3 479 aa18.09■□□□□ 0.49
NIPAL3-204ENST00000374399 SLFN13Q68D06 897 aa18.09■□□□□ 0.49
NIPAL3-204ENST00000374399 LINC00301Q8NCQ3 95 aa18.09■□□□□ 0.49
NIPAL3-204ENST00000374399 DCAF4Q8WV16 495 aa18.09■□□□□ 0.49
NIPAL3-204ENST00000374399 MTMR8Q96EF0 704 aa18.09■□□□□ 0.49
NIPAL3-204ENST00000374399 JMJD4Q9H9V9 463 aa18.09■□□□□ 0.49
NIPAL3-204ENST00000374399 BARHL2Q9NY43 387 aa18.09■□□□□ 0.49
NIPAL3-204ENST00000374399 TMEM63CQ9P1W3 806 aa18.09■□□□□ 0.49
NIPAL3-204ENST00000374399 NDUFB10O96000 172 aa18.09■□□□□ 0.49
NIPAL3-204ENST00000374399 XBP1P17861 261 aa18.09■□□□□ 0.49
NIPAL3-204ENST00000374399 SAFBQ15424 915 aaKnown RBP eCLIP18.09■□□□□ 0.49
NIPAL3-204ENST00000374399 GPATCH4Q5T3I0 446 aaKnown RBP18.09■□□□□ 0.49
NIPAL3-204ENST00000374399 APOBEC3FQ8IUX4 373 aaKnown RBP18.09■□□□□ 0.49
NIPAL3-204ENST00000374399 GLIS2Q9BZE0 524 aaPredicted RBP18.09■□□□□ 0.49
NIPAL3-204ENST00000374399 VAT1LQ9HCJ6 419 aa18.09■□□□□ 0.49
NIPAL3-204ENST00000374399 SYNPO2Q9UMS6 1093 aa18.09■□□□□ 0.49
NIPAL3-204ENST00000374399 TMX2Q9Y320 296 aa18.09■□□□□ 0.49
NIPAL3-204ENST00000374399 M0R2N6 131 aa18.08■□□□□ 0.48
NIPAL3-204ENST00000374399 KRT2P35908 639 aa18.08■□□□□ 0.48
NIPAL3-204ENST00000374399 SLC16A2P36021 539 aa18.08■□□□□ 0.48
NIPAL3-204ENST00000374399 PTPAQ15257 358 aa18.08■□□□□ 0.48
NIPAL3-204ENST00000374399 ANO1Q5XXA6 986 aa18.08■□□□□ 0.48
NIPAL3-204ENST00000374399 CAVIN1Q6NZI2 390 aaKnown RBP18.08■□□□□ 0.48
NIPAL3-204ENST00000374399 CCDC84Q86UT8 332 aaPredicted RBP18.08■□□□□ 0.48
NIPAL3-204ENST00000374399 ADGRF4Q8IZF3 695 aa18.08■□□□□ 0.48
NIPAL3-204ENST00000374399 GMCL1Q96IK5 515 aa18.08■□□□□ 0.48
NIPAL3-204ENST00000374399 PPP1R11O60927 126 aaPredicted RBP18.07■□□□□ 0.48
NIPAL3-204ENST00000374399 CCDC96Q2M329 555 aa18.07■□□□□ 0.48
NIPAL3-204ENST00000374399 HOMER1Q86YM7 354 aa18.07■□□□□ 0.48
NIPAL3-204ENST00000374399 RRP36Q96EU6 259 aaKnown RBP18.07■□□□□ 0.48
NIPAL3-204ENST00000374399 L3MBTL3Q96JM7 780 aaPredicted RBP18.07■□□□□ 0.48
NIPAL3-204ENST00000374399 NUP88Q99567 741 aaPredicted RBP18.07■□□□□ 0.48
NIPAL3-204ENST00000374399 ADARB2Q9NS39 739 aaKnown RBP18.07■□□□□ 0.48
NIPAL3-204ENST00000374399 YEATS4O95619 227 aa18.06■□□□□ 0.48
NIPAL3-204ENST00000374399 SLC1A4P43007 532 aa18.06■□□□□ 0.48
NIPAL3-204ENST00000374399 GNL2Q13823 731 aaKnown RBP18.06■□□□□ 0.48
NIPAL3-204ENST00000374399 GPR162Q16538 588 aa18.06■□□□□ 0.48
NIPAL3-204ENST00000374399 HEATR3Q7Z4Q2 680 aa18.06■□□□□ 0.48
NIPAL3-204ENST00000374399 ZNF112Q9UJU3 913 aa18.06■□□□□ 0.48
NIPAL3-204ENST00000374399 DOCK1Q14185 1865 aa18.06■□□□□ 0.48
NIPAL3-204ENST00000374399 PITPNM2Q9BZ72 1349 aa18.06■□□□□ 0.48
NIPAL3-204ENST00000374399 USP17L10C9JJH3 530 aa18.06■□□□□ 0.48
NIPAL3-204ENST00000374399 WNT7AO00755 349 aa18.06■□□□□ 0.48
NIPAL3-204ENST00000374399 NLRP5P59047 1200 aa18.06■□□□□ 0.48
NIPAL3-204ENST00000374399 GSE1Q14687 1217 aa18.06■□□□□ 0.48
NIPAL3-204ENST00000374399 SF3A1Q15459 793 aaKnown RBP18.06■□□□□ 0.48
NIPAL3-204ENST00000374399 TPRNQ4KMQ1 711 aa18.06■□□□□ 0.48
NIPAL3-204ENST00000374399 DLK2Q6UY11 383 aa18.06■□□□□ 0.48
NIPAL3-204ENST00000374399 DAGLBQ8NCG7 672 aa18.06■□□□□ 0.48
NIPAL3-204ENST00000374399 FZD1Q9UP38 647 aa18.06■□□□□ 0.48
NIPAL3-204ENST00000374399 ASNSP08243 561 aa18.05■□□□□ 0.48
NIPAL3-204ENST00000374399 LIG1P18858 919 aa18.05■□□□□ 0.48
NIPAL3-204ENST00000374399 INPP5BP32019 993 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms