RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 RHOXF2Q9BQY4 288 aa15.24■□□□□ 0.03
CLIC4-201ENST00000374379 NOC4LQ9BVI4 516 aaKnown RBP15.24■□□□□ 0.03
CLIC4-201ENST00000374379 CD209Q9NNX6 404 aa15.24■□□□□ 0.03
CLIC4-201ENST00000374379 AFF2P51816 1311 aa15.24■□□□□ 0.03
CLIC4-201ENST00000374379 TRAF5O00463 557 aa15.24■□□□□ 0.03
CLIC4-201ENST00000374379 MCM6Q14566 821 aa15.24■□□□□ 0.03
CLIC4-201ENST00000374379 SRPRBQ9Y5M8 271 aaKnown RBP15.24■□□□□ 0.03
CLIC4-201ENST00000374379 NWD1Q149M9 1564 aa15.24■□□□□ 0.03
CLIC4-201ENST00000374379 H0YIN7 160 aa15.24■□□□□ 0.03
CLIC4-201ENST00000374379 ERCC6LQ2NKX8 1250 aa15.24■□□□□ 0.03
CLIC4-201ENST00000374379 RESP18Q5W5W9 173 aa15.24■□□□□ 0.03
CLIC4-201ENST00000374379 KRT25Q7Z3Z0 450 aa15.24■□□□□ 0.03
CLIC4-201ENST00000374379 DHX40Q8IX18 779 aaKnown RBP15.24■□□□□ 0.03
CLIC4-201ENST00000374379 MROH7-TTC4A0A0A0MT08 1334 aa15.23■□□□□ 0.03
CLIC4-201ENST00000374379 SPATA31A5Q5VU36 1347 aa15.23■□□□□ 0.03
CLIC4-201ENST00000374379 SPATA31A7Q8IWB4 1347 aa15.23■□□□□ 0.03
CLIC4-201ENST00000374379 PP2D1A8MPX8 630 aa15.23■□□□□ 0.03
CLIC4-201ENST00000374379 CDK8P49336 464 aa15.23■□□□□ 0.03
CLIC4-201ENST00000374379 IQCB1Q15051 598 aa15.23■□□□□ 0.03
CLIC4-201ENST00000374379 FAM114A1Q8IWE2 563 aa15.23■□□□□ 0.03
CLIC4-201ENST00000374379 SRBD1Q8N5C6 995 aaKnown RBP15.23■□□□□ 0.03
CLIC4-201ENST00000374379 MACROD2A1Z1Q3 448 aa15.23■□□□□ 0.03
CLIC4-201ENST00000374379 PPEF1O14829 653 aaPredicted RBP15.23■□□□□ 0.03
CLIC4-201ENST00000374379 ARHGAP6O43182 974 aa15.23■□□□□ 0.03
CLIC4-201ENST00000374379 ERLIN1O75477 346 aa15.23■□□□□ 0.03
CLIC4-201ENST00000374379 FGFR1OPO95684 399 aaKnown RBP15.23■□□□□ 0.03
CLIC4-201ENST00000374379 SF3B3Q15393 1217 aaKnown RBP15.23■□□□□ 0.03
CLIC4-201ENST00000374379 CENPHQ9H3R5 247 aa15.23■□□□□ 0.03
CLIC4-201ENST00000374379 SLC39A2Q9NP94 309 aa15.23■□□□□ 0.03
CLIC4-201ENST00000374379 NALCNQ8IZF0 1738 aa15.22■□□□□ 0.03
CLIC4-201ENST00000374379 FGFR2P21802 821 aa15.22■□□□□ 0.03
CLIC4-201ENST00000374379 EVCP57679 992 aa15.22■□□□□ 0.03
CLIC4-201ENST00000374379 CNGA4Q8IV77 575 aa15.22■□□□□ 0.03
CLIC4-201ENST00000374379 USP8P40818 1118 aa15.22■□□□□ 0.03
CLIC4-201ENST00000374379 GPSM2P81274 684 aa15.22■□□□□ 0.03
CLIC4-201ENST00000374379 PLA2G4DQ86XP0 818 aa15.22■□□□□ 0.03
CLIC4-201ENST00000374379 DPF2Q92785 391 aa15.22■□□□□ 0.03
CLIC4-201ENST00000374379 CCDC42Q96M95 316 aa15.22■□□□□ 0.03
CLIC4-201ENST00000374379 TIGD1Q96MW7 591 aa15.22■□□□□ 0.03
CLIC4-201ENST00000374379 TMEM47Q9BQJ4 181 aa15.22■□□□□ 0.03
CLIC4-201ENST00000374379 LUC7LQ9NQ29 371 aaKnown RBP15.22■□□□□ 0.03
CLIC4-201ENST00000374379 BCL9O00512 1426 aa15.22■□□□□ 0.03
CLIC4-201ENST00000374379 PNPLA7Q6ZV29 1317 aa15.22■□□□□ 0.03
CLIC4-201ENST00000374379 TBCAO75347 108 aaKnown RBP15.22■□□□□ 0.03
CLIC4-201ENST00000374379 SLFN14P0C7P3 912 aa15.22■□□□□ 0.03
CLIC4-201ENST00000374379 USO1O60763 962 aaKnown RBP15.21■□□□□ 0.03
CLIC4-201ENST00000374379 MMP10P09238 476 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 NOP2P46087 812 aaKnown RBP15.21■□□□□ 0.03
CLIC4-201ENST00000374379 SNAP25P60880 206 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 MORC3Q14149 939 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 KRT27Q7Z3Y8 459 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 METTL16Q86W50 562 aaKnown RBP15.21■□□□□ 0.03
CLIC4-201ENST00000374379 PSMB7Q99436 277 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 VIRMAQ69YN4 1812 aaKnown RBP15.21■□□□□ 0.03
CLIC4-201ENST00000374379 GDF11O95390 407 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 RPN1P04843 607 aaKnown RBP15.21■□□□□ 0.03
CLIC4-201ENST00000374379 SP4Q02446 784 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 MAEAQ7L5Y9 396 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 NEK8Q86SG6 692 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 TICAM2Q86XR7 235 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 C2CD5Q86YS7 1000 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 SPAG5Q96R06 1193 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 MXD3Q9BW11 206 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 ACBD3Q9H3P7 528 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 FAM207AQ9NSI2 230 aaPredicted RBP15.21■□□□□ 0.03
CLIC4-201ENST00000374379 GDAQ9Y2T3 454 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 SETD1AO15047 1707 aaKnown RBP15.21■□□□□ 0.03
CLIC4-201ENST00000374379 PPIP5K2O43314 1243 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 CFBP00751 764 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 OR52Z1P0C646 297 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 SYCP1Q15431 976 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 NCAPH2Q6IBW4 605 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 FNBP4Q8N3X1 1017 aaPredicted RBP15.21■□□□□ 0.03
CLIC4-201ENST00000374379 TBCKQ8TEA7 893 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 PAGE5Q96GU1 130 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 FUCA2Q9BTY2 467 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 PCDHA4Q9UN74 947 aa15.21■□□□□ 0.03
CLIC4-201ENST00000374379 CLRN2A0PK11 232 aa15.21■□□□□ 0.02
CLIC4-201ENST00000374379 TCP10L2B9ZVM9 353 aa15.21■□□□□ 0.02
CLIC4-201ENST00000374379 HERC4Q5GLZ8 1057 aaPredicted RBP15.21■□□□□ 0.02
CLIC4-201ENST00000374379 CCDC122Q5T0U0 273 aa15.21■□□□□ 0.02
CLIC4-201ENST00000374379 CPXCR1Q8N123 301 aa15.21■□□□□ 0.02
CLIC4-201ENST00000374379 ZNF512BQ96KM6 892 aaPredicted RBP15.21■□□□□ 0.02
CLIC4-201ENST00000374379 WDR19Q8NEZ3 1342 aa15.2■□□□□ 0.02
CLIC4-201ENST00000374379 CTAGE9A4FU28 777 aa15.2■□□□□ 0.02
CLIC4-201ENST00000374379 KCNJ18B7U540 433 aa15.2■□□□□ 0.02
CLIC4-201ENST00000374379 KCNJ12Q14500 433 aa15.2■□□□□ 0.02
CLIC4-201ENST00000374379 UBE2SQ16763 222 aa15.2■□□□□ 0.02
CLIC4-201ENST00000374379 SPATA1Q5VX52 437 aa15.2■□□□□ 0.02
CLIC4-201ENST00000374379 SYCP3Q8IZU3 236 aa15.2■□□□□ 0.02
CLIC4-201ENST00000374379 ENGASEQ8NFI3 743 aa15.2■□□□□ 0.02
CLIC4-201ENST00000374379 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.2■□□□□ 0.02
CLIC4-201ENST00000374379 BBOX1O75936 387 aa15.2■□□□□ 0.02
CLIC4-201ENST00000374379 PCP11498 1178 aaKnown RBP15.2■□□□□ 0.02
CLIC4-201ENST00000374379 CASP14P31944 242 aa15.2■□□□□ 0.02
CLIC4-201ENST00000374379 CYLC1P35663 651 aaPredicted RBP15.2■□□□□ 0.02
CLIC4-201ENST00000374379 CACNB1Q02641 598 aaPredicted RBP15.2■□□□□ 0.02
CLIC4-201ENST00000374379 LARGE2Q8N3Y3 721 aa15.2■□□□□ 0.02
CLIC4-201ENST00000374379 GJD4Q96KN9 370 aaPredicted RBP15.2■□□□□ 0.02
CLIC4-201ENST00000374379 PPP1R13BQ96KQ4 1090 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms