RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 SMYD4Q8IYR2 804 aaPredicted RBP19.37■□□□□ 0.69
PTPRU-202ENST00000373779 BICD1Q96G01 975 aa19.37■□□□□ 0.69
PTPRU-202ENST00000373779 HYOU1Q9Y4L1 999 aa19.37■□□□□ 0.69
PTPRU-202ENST00000373779 USP31Q70CQ4 1352 aa19.37■□□□□ 0.69
PTPRU-202ENST00000373779 NR5A1Q13285 461 aa19.36■□□□□ 0.69
PTPRU-202ENST00000373779 RESP18Q5W5W9 173 aa19.36■□□□□ 0.69
PTPRU-202ENST00000373779 REXO1Q8N1G1 1221 aaKnown RBP19.36■□□□□ 0.69
PTPRU-202ENST00000373779 PARD6BQ9BYG5 372 aa19.36■□□□□ 0.69
PTPRU-202ENST00000373779 CALUO43852 315 aaPredicted RBP19.36■□□□□ 0.69
PTPRU-202ENST00000373779 COBLO75128 1261 aa19.36■□□□□ 0.69
PTPRU-202ENST00000373779 GYG1P46976 350 aa19.36■□□□□ 0.69
PTPRU-202ENST00000373779 CEP104O60308 925 aa19.36■□□□□ 0.69
PTPRU-202ENST00000373779 PNMA6AP0CW24 399 aaPredicted RBP19.36■□□□□ 0.69
PTPRU-202ENST00000373779 INF2Q27J81 1249 aa19.36■□□□□ 0.69
PTPRU-202ENST00000373779 HERC4Q5GLZ8 1057 aaPredicted RBP19.36■□□□□ 0.69
PTPRU-202ENST00000373779 RGS22Q8NE09 1264 aa19.36■□□□□ 0.69
PTPRU-202ENST00000373779 PAIP2Q9BPZ3 127 aaKnown RBP19.36■□□□□ 0.69
PTPRU-202ENST00000373779 CERS3Q8IU89 383 aa19.35■□□□□ 0.69
PTPRU-202ENST00000373779 GJB4Q9NTQ9 266 aa19.35■□□□□ 0.69
PTPRU-202ENST00000373779 UTP11Q9Y3A2 253 aaKnown RBP19.35■□□□□ 0.69
PTPRU-202ENST00000373779 SRPRBQ9Y5M8 271 aaKnown RBP19.35■□□□□ 0.69
PTPRU-202ENST00000373779 HEG1Q9ULI3 1381 aa19.35■□□□□ 0.69
PTPRU-202ENST00000373779 CCDC151A5D8V7 595 aa19.35■□□□□ 0.69
PTPRU-202ENST00000373779 NLRC4Q9NPP4 1024 aa19.35■□□□□ 0.69
PTPRU-202ENST00000373779 MTUS1Q9ULD2 1270 aa19.35■□□□□ 0.69
PTPRU-202ENST00000373779 SMCO2A6NFE2 343 aa19.35■□□□□ 0.69
PTPRU-202ENST00000373779 EIF6P56537 245 aaKnown RBP19.35■□□□□ 0.69
PTPRU-202ENST00000373779 SCLT1Q96NL6 688 aa19.35■□□□□ 0.69
PTPRU-202ENST00000373779 PANX2Q96RD6 677 aa19.35■□□□□ 0.69
PTPRU-202ENST00000373779 FRMD4BQ9Y2L6 1034 aa19.35■□□□□ 0.69
PTPRU-202ENST00000373779 PCP11498 1178 aaKnown RBP19.35■□□□□ 0.69
PTPRU-202ENST00000373779 RPS6KA1Q15418 735 aa19.35■□□□□ 0.69
PTPRU-202ENST00000373779 RUFY4Q6ZNE9 571 aa19.35■□□□□ 0.69
PTPRU-202ENST00000373779 TBC1D7Q9P0N9 293 aa19.35■□□□□ 0.69
PTPRU-202ENST00000373779 TERF2Q15554 542 aa19.35■□□□□ 0.69
PTPRU-202ENST00000373779 SEL1L2Q5TEA6 688 aa19.35■□□□□ 0.69
PTPRU-202ENST00000373779 CCDC25Q86WR0 208 aa19.35■□□□□ 0.69
PTPRU-202ENST00000373779 GPKOWQ92917 476 aaPredicted RBP eCLIP19.35■□□□□ 0.69
PTPRU-202ENST00000373779 LIFRP42702 1097 aa19.34■□□□□ 0.69
PTPRU-202ENST00000373779 TRAPPC10P48553 1259 aa19.34■□□□□ 0.69
PTPRU-202ENST00000373779 ZSWIM5Q9P217 1185 aa19.34■□□□□ 0.69
PTPRU-202ENST00000373779 NELFCDQ8IXH7 590 aa19.34■□□□□ 0.69
PTPRU-202ENST00000373779 ADGRB1O14514 1584 aa19.34■□□□□ 0.69
PTPRU-202ENST00000373779 CALCOCO2Q13137 446 aa19.34■□□□□ 0.69
PTPRU-202ENST00000373779 PPP1R7Q15435 360 aa19.34■□□□□ 0.69
PTPRU-202ENST00000373779 IL25Q9H293 177 aa19.34■□□□□ 0.69
PTPRU-202ENST00000373779 PCDHB6Q9Y5E3 794 aa19.34■□□□□ 0.69
PTPRU-202ENST00000373779 GOLGA8KD6RF30 607 aa19.34■□□□□ 0.69
PTPRU-202ENST00000373779 GRIPAP1Q4V328 841 aa19.34■□□□□ 0.69
PTPRU-202ENST00000373779 MAPKAPK5Q8IW41 473 aa19.34■□□□□ 0.69
PTPRU-202ENST00000373779 PNMA1Q8ND90 353 aa19.34■□□□□ 0.69
PTPRU-202ENST00000373779 CDCA7Q9BWT1 371 aaPredicted RBP19.34■□□□□ 0.69
PTPRU-202ENST00000373779 CHRNDQ07001 517 aa19.33■□□□□ 0.69
PTPRU-202ENST00000373779 NAA30Q147X3 362 aaPredicted RBP19.33■□□□□ 0.69
PTPRU-202ENST00000373779 OR52Z1P0C646 297 aa19.33■□□□□ 0.69
PTPRU-202ENST00000373779 TCP1P17987 556 aaKnown RBP19.33■□□□□ 0.69
PTPRU-202ENST00000373779 ARHGAP25P42331 645 aa19.33■□□□□ 0.69
PTPRU-202ENST00000373779 TGFBRAP1Q8WUH2 860 aa19.33■□□□□ 0.69
PTPRU-202ENST00000373779 TNFAIP3P21580 790 aa19.33■□□□□ 0.68
PTPRU-202ENST00000373779 GALNT17Q6IS24 598 aa19.33■□□□□ 0.68
PTPRU-202ENST00000373779 GBP6Q6ZN66 633 aa19.33■□□□□ 0.68
PTPRU-202ENST00000373779 ACRBPQ8NEB7 543 aa19.33■□□□□ 0.68
PTPRU-202ENST00000373779 ZC3H12CQ9C0D7 883 aaKnown RBP19.33■□□□□ 0.68
PTPRU-202ENST00000373779 GLT8D2Q9H1C3 349 aa19.33■□□□□ 0.68
PTPRU-202ENST00000373779 BIN2Q9UBW5 565 aaPredicted RBP19.33■□□□□ 0.68
PTPRU-202ENST00000373779 SWAP70Q9UH65 585 aa19.33■□□□□ 0.68
PTPRU-202ENST00000373779 TECP42680 631 aa19.33■□□□□ 0.68
PTPRU-202ENST00000373779 GNGT1P63211 74 aa19.33■□□□□ 0.68
PTPRU-202ENST00000373779 ENC1O14682 589 aa19.32■□□□□ 0.68
PTPRU-202ENST00000373779 UFL1O94874 794 aa19.32■□□□□ 0.68
PTPRU-202ENST00000373779 PLS1Q14651 629 aa19.32■□□□□ 0.68
PTPRU-202ENST00000373779 GNPATO15228 680 aa19.32■□□□□ 0.68
PTPRU-202ENST00000373779 FLOT1O75955 427 aa19.32■□□□□ 0.68
PTPRU-202ENST00000373779 KMT5BQ4FZB7 885 aa19.32■□□□□ 0.68
PTPRU-202ENST00000373779 ZNF622Q969S3 477 aaKnown RBP eCLIP19.32■□□□□ 0.68
PTPRU-202ENST00000373779 LSM14BQ9BX40 385 aaKnown RBP19.32■□□□□ 0.68
PTPRU-202ENST00000373779 TSPOAP1O95153 1857 aa19.32■□□□□ 0.68
PTPRU-202ENST00000373779 EEF1GP26641 437 aaKnown RBP19.32■□□□□ 0.68
PTPRU-202ENST00000373779 PIH1D3Q9NQM4 214 aaKnown RBP19.32■□□□□ 0.68
PTPRU-202ENST00000373779 ATP6V0A2Q9Y487 856 aa19.32■□□□□ 0.68
PTPRU-202ENST00000373779 CPS1P31327 1500 aa19.32■□□□□ 0.68
PTPRU-202ENST00000373779 ZNF658Q5TYW1 1059 aaPredicted RBP19.32■□□□□ 0.68
PTPRU-202ENST00000373779 FAM204AQ9H8W3 233 aa19.32■□□□□ 0.68
PTPRU-202ENST00000373779 ACTN4O43707 911 aaKnown RBP19.31■□□□□ 0.68
PTPRU-202ENST00000373779 PRKAB2O43741 272 aa19.31■□□□□ 0.68
PTPRU-202ENST00000373779 GNA14O95837 355 aa19.31■□□□□ 0.68
PTPRU-202ENST00000373779 GSTA5Q7RTV2 222 aa19.31■□□□□ 0.68
PTPRU-202ENST00000373779 TUBGCP2Q9BSJ2 902 aa19.31■□□□□ 0.68
PTPRU-202ENST00000373779 B4DLN1 442 aa19.31■□□□□ 0.68
PTPRU-202ENST00000373779 CCDC50Q8IVM0 306 aa19.31■□□□□ 0.68
PTPRU-202ENST00000373779 LCORLQ8N3X6 602 aa19.31■□□□□ 0.68
PTPRU-202ENST00000373779 RWDD2AQ9UIY3 292 aa19.31■□□□□ 0.68
PTPRU-202ENST00000373779 IKBKGQ9Y6K9 419 aa19.31■□□□□ 0.68
PTPRU-202ENST00000373779 RIMBP2O15034 1052 aa19.31■□□□□ 0.68
PTPRU-202ENST00000373779 IRX3P78415 501 aaPredicted RBP19.31■□□□□ 0.68
PTPRU-202ENST00000373779 CNOT6LQ96LI5 555 aaKnown RBP19.31■□□□□ 0.68
PTPRU-202ENST00000373779 TRIM31Q9BZY9 425 aa19.31■□□□□ 0.68
PTPRU-202ENST00000373779 KCNK9Q9NPC2 374 aa19.31■□□□□ 0.68
PTPRU-202ENST00000373779 MTMR3Q13615 1198 aa19.3■□□□□ 0.68
PTPRU-202ENST00000373779 MYOCDQ8IZQ8 938 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms