RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 KCNJ6P48051 423 aa27.07■■□□□ 1.92
CDK9-201ENST00000373264 WWC2Q6AWC2 1192 aa27.07■■□□□ 1.92
CDK9-201ENST00000373264 MAPK8IP1Q9UQF2 711 aa27.07■■□□□ 1.92
CDK9-201ENST00000373264 NHSQ6T4R5 1651 aa27.06■■□□□ 1.92
CDK9-201ENST00000373264 UFL1O94874 794 aa27.06■■□□□ 1.92
CDK9-201ENST00000373264 KIF5BP33176 963 aa27.06■■□□□ 1.92
CDK9-201ENST00000373264 MTF1Q14872 753 aa27.06■■□□□ 1.92
CDK9-201ENST00000373264 PDXDC2PQ6P474 469 aa27.06■■□□□ 1.92
CDK9-201ENST00000373264 C4orf32Q8N8J7 132 aa27.06■■□□□ 1.92
CDK9-201ENST00000373264 DESI2Q9BSY9 194 aa27.06■■□□□ 1.92
CDK9-201ENST00000373264 RTFDC1Q9BY42 306 aaPredicted RBP27.06■■□□□ 1.92
CDK9-201ENST00000373264 CTNND2Q9UQB3 1225 aa27.06■■□□□ 1.92
CDK9-201ENST00000373264 NRDCO43847 1150 aa27.06■■□□□ 1.92
CDK9-201ENST00000373264 ERCC5P28715 1186 aaPredicted RBP27.06■■□□□ 1.92
CDK9-201ENST00000373264 BAG1Q99933 345 aaPredicted RBP27.06■■□□□ 1.92
CDK9-201ENST00000373264 LEMD3Q9Y2U8 911 aa27.06■■□□□ 1.92
CDK9-201ENST00000373264 BTDP43251 543 aa27.05■■□□□ 1.92
CDK9-201ENST00000373264 KARSQ15046 597 aaKnown RBP27.05■■□□□ 1.92
CDK9-201ENST00000373264 HEATR3Q7Z4Q2 680 aa27.05■■□□□ 1.92
CDK9-201ENST00000373264 DGKHQ86XP1 1220 aa27.05■■□□□ 1.92
CDK9-201ENST00000373264 CPLX3Q8WVH0 158 aa27.05■■□□□ 1.92
CDK9-201ENST00000373264 PLIN2Q99541 437 aa27.05■■□□□ 1.92
CDK9-201ENST00000373264 TMEM47Q9BQJ4 181 aa27.05■■□□□ 1.92
CDK9-201ENST00000373264 TMEM60Q9H2L4 133 aa27.05■■□□□ 1.92
CDK9-201ENST00000373264 MYO1BO43795 1136 aa27.05■■□□□ 1.92
CDK9-201ENST00000373264 RASA1P20936 1047 aa27.05■■□□□ 1.92
CDK9-201ENST00000373264 MORC2Q9Y6X9 1032 aaPredicted RBP27.05■■□□□ 1.92
CDK9-201ENST00000373264 BMP15O95972 392 aa27.04■■□□□ 1.92
CDK9-201ENST00000373264 GRM4Q14833 912 aa27.04■■□□□ 1.92
CDK9-201ENST00000373264 ZNF804AQ7Z570 1209 aa27.04■■□□□ 1.92
CDK9-201ENST00000373264 PPP2R2CQ9Y2T4 447 aa27.04■■□□□ 1.92
CDK9-201ENST00000373264 A0A1B0GTH6 734 aa27.04■■□□□ 1.92
CDK9-201ENST00000373264 SLU7O95391 586 aaKnown RBP27.04■■□□□ 1.92
CDK9-201ENST00000373264 ETF1P62495 437 aaKnown RBP27.04■■□□□ 1.92
CDK9-201ENST00000373264 SYCP1Q15431 976 aa27.04■■□□□ 1.92
CDK9-201ENST00000373264 INF2Q27J81 1249 aa27.04■■□□□ 1.92
CDK9-201ENST00000373264 SPATA1Q5VX52 437 aa27.04■■□□□ 1.92
CDK9-201ENST00000373264 CD209Q9NNX6 404 aa27.04■■□□□ 1.92
CDK9-201ENST00000373264 PCDHA4Q9UN74 947 aa27.04■■□□□ 1.92
CDK9-201ENST00000373264 ZNF444Q8N0Y2 327 aaPredicted RBP27.03■■□□□ 1.92
CDK9-201ENST00000373264 RPGRQ92834 1020 aaKnown RBP27.03■■□□□ 1.92
CDK9-201ENST00000373264 GSDMAQ96QA5 445 aa27.03■■□□□ 1.92
CDK9-201ENST00000373264 A0A0U1RQJ8 604 aa27.02■■□□□ 1.92
CDK9-201ENST00000373264 ATRIPQ8WXE1 791 aa27.02■■□□□ 1.92
CDK9-201ENST00000373264 L2HGDHQ9H9P8 463 aa27.02■■□□□ 1.92
CDK9-201ENST00000373264 PCDHA6Q9UN73 950 aa27.02■■□□□ 1.92
CDK9-201ENST00000373264 PCDHA8Q9Y5H6 950 aa27.02■■□□□ 1.92
CDK9-201ENST00000373264 KMT5BQ4FZB7 885 aa27.02■■□□□ 1.92
CDK9-201ENST00000373264 CCDC93Q567U6 631 aa27.02■■□□□ 1.92
CDK9-201ENST00000373264 IQUBQ8NA54 791 aa27.02■■□□□ 1.92
CDK9-201ENST00000373264 M0R2N6 131 aa27.01■■□□□ 1.92
CDK9-201ENST00000373264 KIF2AO00139 706 aaPredicted RBP27.01■■□□□ 1.92
CDK9-201ENST00000373264 BAG3O95817 575 aa27.01■■□□□ 1.92
CDK9-201ENST00000373264 CCT6AP40227 531 aaKnown RBP27.01■■□□□ 1.92
CDK9-201ENST00000373264 ERCC6LQ2NKX8 1250 aa27.01■■□□□ 1.92
CDK9-201ENST00000373264 GDAQ9Y2T3 454 aa27.01■■□□□ 1.92
CDK9-201ENST00000373264 THSD7AQ9UPZ6 1657 aa27.01■■□□□ 1.91
CDK9-201ENST00000373264 CDKAL1Q5VV42 579 aa27.01■■□□□ 1.91
CDK9-201ENST00000373264 RRAGBQ5VZM2 374 aa27.01■■□□□ 1.91
CDK9-201ENST00000373264 ARHGAP6O43182 974 aa27■■□□□ 1.91
CDK9-201ENST00000373264 PPP4CP60510 307 aa27■■□□□ 1.91
CDK9-201ENST00000373264 CREBRFQ8IUR6 639 aa27■■□□□ 1.91
CDK9-201ENST00000373264 LRRC15Q8TF66 581 aa27■■□□□ 1.91
CDK9-201ENST00000373264 ERO1AQ96HE7 468 aa27■■□□□ 1.91
CDK9-201ENST00000373264 LY75O60449 1722 aa27■■□□□ 1.91
CDK9-201ENST00000373264 NAV1Q8NEY1 1877 aa27■■□□□ 1.91
CDK9-201ENST00000373264 SOWAHDA6NJG2 315 aa27■■□□□ 1.91
CDK9-201ENST00000373264 TRAPPC10P48553 1259 aa27■■□□□ 1.91
CDK9-201ENST00000373264 RBL2Q08999 1139 aa27■■□□□ 1.91
CDK9-201ENST00000373264 USP17L2Q6R6M4 530 aa27■■□□□ 1.91
CDK9-201ENST00000373264 ADD3Q9UEY8 706 aaKnown RBP27■■□□□ 1.91
CDK9-201ENST00000373264 POLLQ9UGP5 575 aa27■■□□□ 1.91
CDK9-201ENST00000373264 ROBO3Q96MS0 1386 aa27■■□□□ 1.91
CDK9-201ENST00000373264 STXBP3O00186 592 aa26.99■■□□□ 1.91
CDK9-201ENST00000373264 GYS1P13807 737 aa26.99■■□□□ 1.91
CDK9-201ENST00000373264 FBXO38Q6PIJ6 1188 aa26.99■■□□□ 1.91
CDK9-201ENST00000373264 ANKS1AQ92625 1134 aa26.99■■□□□ 1.91
CDK9-201ENST00000373264 WDR24Q96S15 920 aa26.99■■□□□ 1.91
CDK9-201ENST00000373264 NOL10Q9BSC4 688 aaKnown RBP26.99■■□□□ 1.91
CDK9-201ENST00000373264 CDK8P49336 464 aa26.99■■□□□ 1.91
CDK9-201ENST00000373264 TEX11Q8IYF3 940 aa26.99■■□□□ 1.91
CDK9-201ENST00000373264 CDK5RAP2Q96SN8 1893 aa26.99■■□□□ 1.91
CDK9-201ENST00000373264 SNED1Q8TER0 1413 aa26.99■■□□□ 1.91
CDK9-201ENST00000373264 CCDC194A0A1B0GVG4 234 aa26.98■■□□□ 1.91
CDK9-201ENST00000373264 CALML3P27482 149 aa26.98■■□□□ 1.91
CDK9-201ENST00000373264 GSTO1P78417 241 aa26.98■■□□□ 1.91
CDK9-201ENST00000373264 DHX8Q14562 1220 aaKnown RBP26.98■■□□□ 1.91
CDK9-201ENST00000373264 VAT1LQ9HCJ6 419 aa26.98■■□□□ 1.91
CDK9-201ENST00000373264 KLRF2D3W0D1 207 aa26.98■■□□□ 1.91
CDK9-201ENST00000373264 SERPINB2P05120 415 aa26.98■■□□□ 1.91
CDK9-201ENST00000373264 NAALADL2Q58DX5 795 aa26.98■■□□□ 1.91
CDK9-201ENST00000373264 IGSF22Q8N9C0 903 aa26.98■■□□□ 1.91
CDK9-201ENST00000373264 CCDC34Q96HJ3 373 aa26.98■■□□□ 1.91
CDK9-201ENST00000373264 EYA3Q99504 573 aa26.98■■□□□ 1.91
CDK9-201ENST00000373264 IRX2Q9BZI1 471 aaPredicted RBP26.98■■□□□ 1.91
CDK9-201ENST00000373264 PALM3A6NDB9 673 aaPredicted RBP26.97■■□□□ 1.91
CDK9-201ENST00000373264 MFSD14BQ5SR56 506 aa26.97■■□□□ 1.91
CDK9-201ENST00000373264 GJD4Q96KN9 370 aaPredicted RBP26.97■■□□□ 1.91
CDK9-201ENST00000373264 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.97■■□□□ 1.918e-9■■■■□ 21.5
CDK9-201ENST00000373264 MRPL44Q9H9J2 332 aaKnown RBP26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms