RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 TRIM75PA6NK02 468 aa18.44■□□□□ 0.54
TMEM53-204ENST00000372243 CPLX1O14810 134 aa18.44■□□□□ 0.54
TMEM53-204ENST00000372243 IRF6O14896 467 aa18.44■□□□□ 0.54
TMEM53-204ENST00000372243 CDKL5O76039 1030 aa18.44■□□□□ 0.54
TMEM53-204ENST00000372243 IFNAR1P17181 557 aa18.44■□□□□ 0.54
TMEM53-204ENST00000372243 NTRK3Q16288 839 aa18.44■□□□□ 0.54
TMEM53-204ENST00000372243 CNKSR2Q8WXI2 1034 aa18.44■□□□□ 0.54
TMEM53-204ENST00000372243 TLL2Q9Y6L7 1015 aa18.44■□□□□ 0.54
TMEM53-204ENST00000372243 TMEM88BA6NKF7 163 aa18.43■□□□□ 0.54
TMEM53-204ENST00000372243 WDR46O15213 610 aaKnown RBP18.43■□□□□ 0.54
TMEM53-204ENST00000372243 BMP3P12645 472 aa18.43■□□□□ 0.54
TMEM53-204ENST00000372243 KIAA1755Q5JYT7 1200 aa18.43■□□□□ 0.54
TMEM53-204ENST00000372243 TMTC3Q6ZXV5 915 aa18.43■□□□□ 0.54
TMEM53-204ENST00000372243 RASGRP2Q7LDG7 609 aa18.43■□□□□ 0.54
TMEM53-204ENST00000372243 STAG2Q8N3U4 1231 aa18.43■□□□□ 0.54
TMEM53-204ENST00000372243 EMILIN3Q9NT22 766 aa18.43■□□□□ 0.54
TMEM53-204ENST00000372243 DAXXQ9UER7 740 aaPredicted RBP18.43■□□□□ 0.54
TMEM53-204ENST00000372243 MTMR7Q9Y216 660 aa18.43■□□□□ 0.54
TMEM53-204ENST00000372243 KLRF2D3W0D1 207 aa18.42■□□□□ 0.54
TMEM53-204ENST00000372243 RAD21O60216 631 aa18.42■□□□□ 0.54
TMEM53-204ENST00000372243 CTDNEP1O95476 244 aa18.42■□□□□ 0.54
TMEM53-204ENST00000372243 HSP90AA1P07900 732 aaKnown RBP18.42■□□□□ 0.54
TMEM53-204ENST00000372243 ZBTB48P10074 688 aaPredicted RBP18.42■□□□□ 0.54
TMEM53-204ENST00000372243 ZYXQ15942 572 aaKnown RBP18.42■□□□□ 0.54
TMEM53-204ENST00000372243 SMARCC2Q8TAQ2 1214 aa18.42■□□□□ 0.54
TMEM53-204ENST00000372243 WNK4Q96J92 1243 aa18.42■□□□□ 0.54
TMEM53-204ENST00000372243 HHIPL1Q96JK4 782 aa18.42■□□□□ 0.54
TMEM53-204ENST00000372243 A0A0G2JLL6 359 aaPredicted RBP18.42■□□□□ 0.54
TMEM53-204ENST00000372243 PLA2G6O60733 806 aa18.42■□□□□ 0.54
TMEM53-204ENST00000372243 GOLGA8HP0CJ92 632 aa18.42■□□□□ 0.54
TMEM53-204ENST00000372243 HMGCS2P54868 508 aa18.42■□□□□ 0.54
TMEM53-204ENST00000372243 FUT2Q10981 343 aa18.42■□□□□ 0.54
TMEM53-204ENST00000372243 CCDC96Q2M329 555 aa18.42■□□□□ 0.54
TMEM53-204ENST00000372243 PRRT2Q7Z6L0 340 aaPredicted RBP18.42■□□□□ 0.54
TMEM53-204ENST00000372243 SPICE1Q8N0Z3 855 aa18.42■□□□□ 0.54
TMEM53-204ENST00000372243 PROCA1Q8NCQ7 364 aaPredicted RBP18.42■□□□□ 0.54
TMEM53-204ENST00000372243 NSUN7Q8NE18 718 aaKnown RBP18.42■□□□□ 0.54
TMEM53-204ENST00000372243 SPZ1Q9BXG8 430 aa18.42■□□□□ 0.54
TMEM53-204ENST00000372243 TMOD4Q9NZQ9 345 aa18.42■□□□□ 0.54
TMEM53-204ENST00000372243 LOC285556D6RIA3 1793 aa18.42■□□□□ 0.54
TMEM53-204ENST00000372243 PLEKHA8P1O95397 391 aa18.41■□□□□ 0.54
TMEM53-204ENST00000372243 VCAM1P19320 739 aa18.41■□□□□ 0.54
TMEM53-204ENST00000372243 GJA5P36382 358 aa18.41■□□□□ 0.54
TMEM53-204ENST00000372243 BTNL9Q6UXG8 535 aa18.41■□□□□ 0.54
TMEM53-204ENST00000372243 KCTD1Q719H9 257 aa18.41■□□□□ 0.54
TMEM53-204ENST00000372243 SRBD1Q8N5C6 995 aaKnown RBP18.41■□□□□ 0.54
TMEM53-204ENST00000372243 FRMPD2Q68DX3 1309 aaPredicted RBP18.41■□□□□ 0.54
TMEM53-204ENST00000372243 HMGN5P82970 282 aaKnown RBP18.4■□□□□ 0.54
TMEM53-204ENST00000372243 SNAPC2Q13487 334 aa18.4■□□□□ 0.54
TMEM53-204ENST00000372243 FAM83BQ5T0W9 1011 aa18.4■□□□□ 0.54
TMEM53-204ENST00000372243 SPRYD7Q5W111 196 aa18.4■□□□□ 0.54
TMEM53-204ENST00000372243 RGMBQ6NW40 437 aa18.4■□□□□ 0.54
TMEM53-204ENST00000372243 NBPF11Q86T75 865 aa18.4■□□□□ 0.54
TMEM53-204ENST00000372243 NUP88Q99567 741 aaPredicted RBP18.4■□□□□ 0.54
TMEM53-204ENST00000372243 RNF26Q9BY78 433 aaPredicted RBP18.4■□□□□ 0.54
TMEM53-204ENST00000372243 RIOX1Q9H6W3 641 aa18.4■□□□□ 0.54
TMEM53-204ENST00000372243 GPCPD1Q9NPB8 672 aa18.4■□□□□ 0.54
TMEM53-204ENST00000372243 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.4■□□□□ 0.54
TMEM53-204ENST00000372243 STK36Q9NRP7 1315 aa18.4■□□□□ 0.54
TMEM53-204ENST00000372243 PTPDC1A2A3K4 754 aa18.39■□□□□ 0.53
TMEM53-204ENST00000372243 TMEM232C9JQI7 657 aa18.39■□□□□ 0.53
TMEM53-204ENST00000372243 SLC4A3P48751 1232 aa18.39■□□□□ 0.53
TMEM53-204ENST00000372243 STAT2P52630 851 aa18.39■□□□□ 0.53
TMEM53-204ENST00000372243 FASTKD5Q7L8L6 764 aaKnown RBP18.39■□□□□ 0.53
TMEM53-204ENST00000372243 FAM160B2Q86V87 743 aa18.39■□□□□ 0.53
TMEM53-204ENST00000372243 CHURC1Q8WUH1 139 aa18.39■□□□□ 0.53
TMEM53-204ENST00000372243 RBM27Q9P2N5 1060 aaKnown RBP18.39■□□□□ 0.53
TMEM53-204ENST00000372243 FEM1BQ9UK73 627 aa18.39■□□□□ 0.53
TMEM53-204ENST00000372243 SMC3Q9UQE7 1217 aa18.39■□□□□ 0.53
TMEM53-204ENST00000372243 CNTNAP5Q8WYK1 1306 aa18.39■□□□□ 0.53
TMEM53-204ENST00000372243 PRPF3O43395 683 aaKnown RBP18.38■□□□□ 0.53
TMEM53-204ENST00000372243 CYTH3O43739 400 aa18.38■□□□□ 0.53
TMEM53-204ENST00000372243 FMNL1O95466 1100 aaPredicted RBP18.38■□□□□ 0.53
TMEM53-204ENST00000372243 APLP1P51693 650 aa18.38■□□□□ 0.53
TMEM53-204ENST00000372243 ZNF157P51786 506 aaPredicted RBP18.38■□□□□ 0.53
TMEM53-204ENST00000372243 GTF2A2P52657 109 aa18.38■□□□□ 0.53
TMEM53-204ENST00000372243 SSRP1Q08945 709 aaKnown RBP18.38■□□□□ 0.53
TMEM53-204ENST00000372243 DGKZQ13574 1117 aa18.38■□□□□ 0.53
TMEM53-204ENST00000372243 TRIM22Q8IYM9 498 aa18.38■□□□□ 0.53
TMEM53-204ENST00000372243 CMTR1Q8N1G2 835 aaKnown RBP18.38■□□□□ 0.53
TMEM53-204ENST00000372243 JAK2O60674 1132 aa18.38■□□□□ 0.53
TMEM53-204ENST00000372243 SLC35G1Q2M3R5 365 aa18.38■□□□□ 0.53
TMEM53-204ENST00000372243 TTBK2Q6IQ55 1244 aa18.38■□□□□ 0.53
TMEM53-204ENST00000372243 RASAL3Q86YV0 1011 aa18.38■□□□□ 0.53
TMEM53-204ENST00000372243 MS4A4AQ96JQ5 239 aa18.38■□□□□ 0.53
TMEM53-204ENST00000372243 UBA5Q9GZZ9 404 aa18.38■□□□□ 0.53
TMEM53-204ENST00000372243 RPAP3Q9H6T3 665 aaPredicted RBP18.38■□□□□ 0.53
TMEM53-204ENST00000372243 CWC22Q9HCG8 908 aaKnown RBP18.38■□□□□ 0.53
TMEM53-204ENST00000372243 CREBZFQ9NS37 354 aa18.38■□□□□ 0.53
TMEM53-204ENST00000372243 ABT1Q9ULW3 272 aaKnown RBP18.38■□□□□ 0.53
TMEM53-204ENST00000372243 CETPP11597 493 aa18.37■□□□□ 0.53
TMEM53-204ENST00000372243 FDPSP14324 419 aaKnown RBP18.37■□□□□ 0.53
TMEM53-204ENST00000372243 HOXA7P31268 230 aaPredicted RBP18.37■□□□□ 0.53
TMEM53-204ENST00000372243 MOGSQ13724 837 aa18.37■□□□□ 0.53
TMEM53-204ENST00000372243 CCDC82Q8N4S0 544 aa18.37■□□□□ 0.53
TMEM53-204ENST00000372243 PHKBQ93100 1093 aa18.37■□□□□ 0.53
TMEM53-204ENST00000372243 CCDC102AQ96A19 550 aa18.37■□□□□ 0.53
TMEM53-204ENST00000372243 SLC26A6Q9BXS9 759 aa18.37■□□□□ 0.53
TMEM53-204ENST00000372243 ISY1Q9ULR0 285 aaKnown RBP18.37■□□□□ 0.53
TMEM53-204ENST00000372243 KIF3AQ9Y496 699 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms