RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 FAM114A2Q9NRY5 505 aa26.43■■□□□ 1.82
RAPGEF1-203ENST00000372195 BLMP54132 1417 aaPredicted RBP26.43■■□□□ 1.82
RAPGEF1-203ENST00000372195 HSPD1P10809 573 aaKnown RBP26.43■■□□□ 1.82
RAPGEF1-203ENST00000372195 BAIAP2L1Q9UHR4 511 aa26.43■■□□□ 1.82
RAPGEF1-203ENST00000372195 SCRN1Q12765 414 aa26.43■■□□□ 1.82
RAPGEF1-203ENST00000372195 TTLL7Q6ZT98 887 aa26.43■■□□□ 1.82
RAPGEF1-203ENST00000372195 GAS2L3Q86XJ1 694 aa26.43■■□□□ 1.82
RAPGEF1-203ENST00000372195 AMFRQ9UKV5 643 aa26.42■■□□□ 1.82
RAPGEF1-203ENST00000372195 PRPF6O94906 941 aaKnown RBP26.42■■□□□ 1.82
RAPGEF1-203ENST00000372195 ZSCAN26Q16670 478 aa26.42■■□□□ 1.82
RAPGEF1-203ENST00000372195 USP40Q9NVE5 1235 aa26.42■■□□□ 1.82
RAPGEF1-203ENST00000372195 STK10O94804 968 aaKnown RBP26.42■■□□□ 1.82
RAPGEF1-203ENST00000372195 RILPQ96NA2 401 aa26.42■■□□□ 1.82
RAPGEF1-203ENST00000372195 PANK4Q9NVE7 773 aa26.42■■□□□ 1.82
RAPGEF1-203ENST00000372195 ARHGEF12Q9NZN5 1544 aa26.42■■□□□ 1.82
RAPGEF1-203ENST00000372195 MAST1Q9Y2H9 1570 aa26.41■■□□□ 1.82
RAPGEF1-203ENST00000372195 ZMYM6O95789 1325 aa26.41■■□□□ 1.82
RAPGEF1-203ENST00000372195 CPSF2Q9P2I0 782 aaKnown RBP26.41■■□□□ 1.82
RAPGEF1-203ENST00000372195 KRIT1O00522 736 aa26.41■■□□□ 1.82
RAPGEF1-203ENST00000372195 GTF2IP78347 998 aa26.41■■□□□ 1.82
RAPGEF1-203ENST00000372195 ADCK5Q3MIX3 580 aa26.41■■□□□ 1.82
RAPGEF1-203ENST00000372195 BLIDQ8IZY5 108 aa26.41■■□□□ 1.82
RAPGEF1-203ENST00000372195 MKRN1Q9UHC7 482 aaKnown RBP26.41■■□□□ 1.82
RAPGEF1-203ENST00000372195 POLR2FP61218 127 aaKnown RBP26.41■■□□□ 1.82
RAPGEF1-203ENST00000372195 ZSWIM6Q9HCJ5 1215 aa26.41■■□□□ 1.82
RAPGEF1-203ENST00000372195 ZNF215Q9UL58 517 aaPredicted RBP26.41■■□□□ 1.82
RAPGEF1-203ENST00000372195 ABCC4O15439 1325 aa26.4■■□□□ 1.82
RAPGEF1-203ENST00000372195 EIF4G3O43432 1585 aaKnown RBP26.4■■□□□ 1.82
RAPGEF1-203ENST00000372195 ZBED4O75132 1171 aa26.4■■□□□ 1.82
RAPGEF1-203ENST00000372195 TLR7Q9NYK1 1049 aaKnown RBP26.4■■□□□ 1.82
RAPGEF1-203ENST00000372195 CCDC170Q8IYT3 715 aa26.4■■□□□ 1.82
RAPGEF1-203ENST00000372195 ADCY9O60503 1353 aa26.4■■□□□ 1.82
RAPGEF1-203ENST00000372195 I3L4J1 428 aa26.4■■□□□ 1.82
RAPGEF1-203ENST00000372195 HOXB7P09629 217 aa26.4■■□□□ 1.82
RAPGEF1-203ENST00000372195 PLCB1Q9NQ66 1216 aa26.4■■□□□ 1.82
RAPGEF1-203ENST00000372195 BABAM1Q9NWV8 329 aa26.4■■□□□ 1.82
RAPGEF1-203ENST00000372195 BTBD18B2RXH4 712 aa26.4■■□□□ 1.82
RAPGEF1-203ENST00000372195 CEP128Q6ZU80 1094 aa26.4■■□□□ 1.82
RAPGEF1-203ENST00000372195 ST7Q9NRC1 585 aa26.4■■□□□ 1.82
RAPGEF1-203ENST00000372195 CAPN7Q9Y6W3 813 aa26.4■■□□□ 1.82
RAPGEF1-203ENST00000372195 SEC31AO94979 1220 aaKnown RBP26.4■■□□□ 1.82
RAPGEF1-203ENST00000372195 SYMPKQ92797 1274 aaKnown RBP26.39■■□□□ 1.82
RAPGEF1-203ENST00000372195 NAA35Q5VZE5 725 aa26.39■■□□□ 1.82
RAPGEF1-203ENST00000372195 ZNF274Q96GC6 653 aaPredicted RBP26.39■■□□□ 1.82
RAPGEF1-203ENST00000372195 NOD1Q9Y239 953 aa26.39■■□□□ 1.82
RAPGEF1-203ENST00000372195 PFKFB2O60825 505 aa26.39■■□□□ 1.82
RAPGEF1-203ENST00000372195 SCNN1DP51172 638 aa26.39■■□□□ 1.82
RAPGEF1-203ENST00000372195 PPFIA1Q13136 1202 aa26.39■■□□□ 1.82
RAPGEF1-203ENST00000372195 TBC1D31Q96DN5 1066 aa26.39■■□□□ 1.82
RAPGEF1-203ENST00000372195 AZI2Q9H6S1 392 aa26.39■■□□□ 1.82
RAPGEF1-203ENST00000372195 CFAP65Q6ZU64 1925 aaKnown RBP26.39■■□□□ 1.81
RAPGEF1-203ENST00000372195 RGS16O15492 202 aaPredicted RBP26.39■■□□□ 1.81
RAPGEF1-203ENST00000372195 KIAA0556O60303 1618 aa26.39■■□□□ 1.81
RAPGEF1-203ENST00000372195 CCDC117Q8IWD4 279 aaPredicted RBP26.39■■□□□ 1.81
RAPGEF1-203ENST00000372195 LARGE2Q8N3Y3 721 aa26.39■■□□□ 1.81
RAPGEF1-203ENST00000372195 TESPA1A2RU30 521 aaPredicted RBP26.38■■□□□ 1.81
RAPGEF1-203ENST00000372195 GAS7O60861 476 aa26.38■■□□□ 1.81
RAPGEF1-203ENST00000372195 CTAGE3PQ8IX95 158 aa26.38■■□□□ 1.81
RAPGEF1-203ENST00000372195 IFNB1P01574 187 aa26.38■■□□□ 1.81
RAPGEF1-203ENST00000372195 SCYL2Q6P3W7 929 aa26.38■■□□□ 1.81
RAPGEF1-203ENST00000372195 MYOCDQ8IZQ8 938 aa26.38■■□□□ 1.81
RAPGEF1-203ENST00000372195 TSKSQ9UJT2 592 aa26.38■■□□□ 1.81
RAPGEF1-203ENST00000372195 THRAP3Q9Y2W1 955 aaKnown RBP26.38■■□□□ 1.81
RAPGEF1-203ENST00000372195 MTMR3Q13615 1198 aa26.38■■□□□ 1.81
RAPGEF1-203ENST00000372195 MIER3Q7Z3K6 550 aa26.38■■□□□ 1.81
RAPGEF1-203ENST00000372195 UNC5CLQ8IV45 518 aa26.38■■□□□ 1.81
RAPGEF1-203ENST00000372195 OR8K1Q8NGG5 319 aa26.38■■□□□ 1.81
RAPGEF1-203ENST00000372195 FGAP02671 866 aa26.38■■□□□ 1.81
RAPGEF1-203ENST00000372195 TRIM68Q6AZZ1 485 aa26.38■■□□□ 1.81
RAPGEF1-203ENST00000372195 CCDC13Q8IYE1 715 aa26.38■■□□□ 1.81
RAPGEF1-203ENST00000372195 ANKRD13CQ8N6S4 541 aa26.38■■□□□ 1.81
RAPGEF1-203ENST00000372195 LZTS2Q9BRK4 669 aa26.38■■□□□ 1.81
RAPGEF1-203ENST00000372195 ENC1O14682 589 aa26.37■■□□□ 1.81
RAPGEF1-203ENST00000372195 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.37■■□□□ 1.81
RAPGEF1-203ENST00000372195 WDR62O43379 1518 aa26.37■■□□□ 1.81
RAPGEF1-203ENST00000372195 ABCC10Q5T3U5 1492 aa26.37■■□□□ 1.81
RAPGEF1-203ENST00000372195 XRCC5P13010 732 aaKnown RBP26.37■■□□□ 1.81
RAPGEF1-203ENST00000372195 TBC1D10BQ4KMP7 808 aaPredicted RBP26.37■■□□□ 1.81
RAPGEF1-203ENST00000372195 CEP120Q8N960 986 aa26.37■■□□□ 1.81
RAPGEF1-203ENST00000372195 RPN1P04843 607 aaKnown RBP26.37■■□□□ 1.81
RAPGEF1-203ENST00000372195 STX2P32856 288 aa26.37■■□□□ 1.81
RAPGEF1-203ENST00000372195 SMYD4Q8IYR2 804 aaPredicted RBP26.37■■□□□ 1.81
RAPGEF1-203ENST00000372195 IL17REQ8NFR9 667 aa26.37■■□□□ 1.81
RAPGEF1-203ENST00000372195 TM6SF1Q9BZW5 370 aa26.37■■□□□ 1.81
RAPGEF1-203ENST00000372195 KDRP35968 1356 aa26.37■■□□□ 1.81
RAPGEF1-203ENST00000372195 ADORA1P30542 326 aa26.37■■□□□ 1.81
RAPGEF1-203ENST00000372195 ARHGAP25P42331 645 aa26.37■■□□□ 1.81
RAPGEF1-203ENST00000372195 METTL13Q8N6R0 699 aa26.37■■□□□ 1.81
RAPGEF1-203ENST00000372195 ANO3Q9BYT9 981 aa26.37■■□□□ 1.81
RAPGEF1-203ENST00000372195 KAZNQ674X7 775 aa26.37■■□□□ 1.81
RAPGEF1-203ENST00000372195 RSAD2Q8WXG1 361 aa26.37■■□□□ 1.81
RAPGEF1-203ENST00000372195 TNKSO95271 1327 aa26.36■■□□□ 1.81
RAPGEF1-203ENST00000372195 CD2BP2O95400 341 aaKnown RBP26.36■■□□□ 1.81
RAPGEF1-203ENST00000372195 CDAN1Q8IWY9 1227 aa26.36■■□□□ 1.81
RAPGEF1-203ENST00000372195 PALM2Q8IXS6 379 aa26.36■■□□□ 1.81
RAPGEF1-203ENST00000372195 FANCBQ8NB91 859 aa26.36■■□□□ 1.81
RAPGEF1-203ENST00000372195 ADCY8P40145 1251 aa26.36■■□□□ 1.81
RAPGEF1-203ENST00000372195 ARPP21Q9UBL0 812 aaPredicted RBP26.36■■□□□ 1.81
RAPGEF1-203ENST00000372195 CCDC84Q86UT8 332 aaPredicted RBP26.36■■□□□ 1.81
RAPGEF1-203ENST00000372195 M0R2C6 588 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms