RNA–Protein interactions for RNA: ENST00000371746.7

LHX3-201, Transcript of LIM homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX3, Length 2,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-201ENST00000371746 HOMER1Q86YM7 354 aa27.16■■□□□ 1.94
LHX3-201ENST00000371746 SHMT1P34896 483 aa27.15■■□□□ 1.94
LHX3-201ENST00000371746 ZNF75DP51815 510 aa27.15■■□□□ 1.94
LHX3-201ENST00000371746 KIAA2012Q0VF49 1180 aa27.15■■□□□ 1.94
LHX3-201ENST00000371746 PCDHA4Q9UN74 947 aa27.15■■□□□ 1.94
LHX3-201ENST00000371746 PLIN4Q96Q06 1357 aa27.15■■□□□ 1.94
LHX3-201ENST00000371746 PTGDRQ13258 359 aa27.15■■□□□ 1.94
LHX3-201ENST00000371746 PLA2G4DQ86XP0 818 aa27.15■■□□□ 1.94
LHX3-201ENST00000371746 FOXP4Q8IVH2 680 aaPredicted RBP27.15■■□□□ 1.94
LHX3-201ENST00000371746 LZTS2Q9BRK4 669 aa27.15■■□□□ 1.94
LHX3-201ENST00000371746 TUBE1Q9UJT0 475 aa27.15■■□□□ 1.94
LHX3-201ENST00000371746 STXBP3O00186 592 aa27.14■■□□□ 1.94
LHX3-201ENST00000371746 NLRP12P59046 1061 aa27.14■■□□□ 1.94
LHX3-201ENST00000371746 EPSTI1Q96J88 318 aa27.14■■□□□ 1.94
LHX3-201ENST00000371746 SPZ1Q9BXG8 430 aa27.14■■□□□ 1.94
LHX3-201ENST00000371746 BARHL2Q9NY43 387 aa27.14■■□□□ 1.94
LHX3-201ENST00000371746 FRMPD2Q68DX3 1309 aaPredicted RBP27.14■■□□□ 1.93
LHX3-201ENST00000371746 MCM7P33993 719 aa27.14■■□□□ 1.93
LHX3-201ENST00000371746 UBA5Q9GZZ9 404 aa27.14■■□□□ 1.93
LHX3-201ENST00000371746 VAT1LQ9HCJ6 419 aa27.14■■□□□ 1.93
LHX3-201ENST00000371746 PPIP5K2O43314 1243 aa27.13■■□□□ 1.93
LHX3-201ENST00000371746 HLA-DOAP06340 250 aa27.13■■□□□ 1.93
LHX3-201ENST00000371746 SERTAD1Q9UHV2 236 aa27.13■■□□□ 1.93
LHX3-201ENST00000371746 FAM196BA6NMK8 535 aa27.12■■□□□ 1.93
LHX3-201ENST00000371746 PDHBP11177 359 aa27.12■■□□□ 1.93
LHX3-201ENST00000371746 SWAP70Q9UH65 585 aa27.12■■□□□ 1.93
LHX3-201ENST00000371746 IGKV6D-41A0A0C4DH26 115 aa27.12■■□□□ 1.93
LHX3-201ENST00000371746 CLIP2Q9UDT6 1046 aa27.12■■□□□ 1.93
LHX3-201ENST00000371746 PCDHA5Q9Y5H7 936 aa27.12■■□□□ 1.93
LHX3-201ENST00000371746 VWA3AA6NCI4 1184 aa27.11■■□□□ 1.93
LHX3-201ENST00000371746 YDJCA8MPS7 323 aa27.11■■□□□ 1.93
LHX3-201ENST00000371746 BMP15O95972 392 aa27.11■■□□□ 1.93
LHX3-201ENST00000371746 FKBP1AP62942 108 aaKnown RBP27.11■■□□□ 1.93
LHX3-201ENST00000371746 ATP2C1P98194 919 aaPredicted RBP27.11■■□□□ 1.93
LHX3-201ENST00000371746 GRAMD1CQ8IYS0 662 aa27.11■■□□□ 1.93
LHX3-201ENST00000371746 A0A087X0B3 334 aa27.11■■□□□ 1.93
LHX3-201ENST00000371746 MPHOSPH10O00566 681 aaKnown RBP27.11■■□□□ 1.93
LHX3-201ENST00000371746 TRAPPC10P48553 1259 aa27.11■■□□□ 1.93
LHX3-201ENST00000371746 MDM2Q00987 491 aaPredicted RBP27.11■■□□□ 1.93
LHX3-201ENST00000371746 SF3B2Q13435 895 aaKnown RBP27.11■■□□□ 1.93
LHX3-201ENST00000371746 DNAJC18Q9H819 358 aa27.11■■□□□ 1.93
LHX3-201ENST00000371746 FAM198AQ9UFP1 575 aa27.11■■□□□ 1.93
LHX3-201ENST00000371746 MORC2Q9Y6X9 1032 aaPredicted RBP27.11■■□□□ 1.93
LHX3-201ENST00000371746 M0R2N6 131 aa27.1■■□□□ 1.93
LHX3-201ENST00000371746 CCDC148Q8NFR7 591 aa27.1■■□□□ 1.93
LHX3-201ENST00000371746 SYMPKQ92797 1274 aaKnown RBP27.1■■□□□ 1.93
LHX3-201ENST00000371746 DDTLA6NHG4 134 aaPredicted RBP27.1■■□□□ 1.93
LHX3-201ENST00000371746 ZNF500O60304 480 aaPredicted RBP27.1■■□□□ 1.93
LHX3-201ENST00000371746 BAG6P46379 1132 aa27.1■■□□□ 1.93
LHX3-201ENST00000371746 DRC7Q8IY82 874 aa27.1■■□□□ 1.93
LHX3-201ENST00000371746 FERMT2Q96AC1 680 aa27.1■■□□□ 1.93
LHX3-201ENST00000371746 PIGSQ96S52 555 aa27.1■■□□□ 1.93
LHX3-201ENST00000371746 MRIQ9BWK5 157 aa27.1■■□□□ 1.93
LHX3-201ENST00000371746 PCDHA6Q9UN73 950 aa27.1■■□□□ 1.93
LHX3-201ENST00000371746 PCDHA8Q9Y5H6 950 aa27.1■■□□□ 1.93
LHX3-201ENST00000371746 TTLL1O95922 423 aa27.09■■□□□ 1.93
LHX3-201ENST00000371746 PRR29P0C7W0 189 aa27.09■■□□□ 1.93
LHX3-201ENST00000371746 SARM1Q6SZW1 724 aa27.09■■□□□ 1.93
LHX3-201ENST00000371746 RRP36Q96EU6 259 aaKnown RBP27.09■■□□□ 1.93
LHX3-201ENST00000371746 ACTN4O43707 911 aaKnown RBP27.09■■□□□ 1.93
LHX3-201ENST00000371746 NAPAP54920 295 aa27.09■■□□□ 1.93
LHX3-201ENST00000371746 ATP2B2Q01814 1243 aa27.09■■□□□ 1.93
LHX3-201ENST00000371746 POSTNQ15063 836 aa27.09■■□□□ 1.93
LHX3-201ENST00000371746 SHROOM1Q2M3G4 852 aaPredicted RBP27.09■■□□□ 1.93
LHX3-201ENST00000371746 SERPINA10Q9UK55 444 aa27.09■■□□□ 1.93
LHX3-201ENST00000371746 CCDC194A0A1B0GVG4 234 aa27.08■■□□□ 1.93
LHX3-201ENST00000371746 HDLBPQ00341 1268 aaKnown RBP27.08■■□□□ 1.93
LHX3-201ENST00000371746 CC2D2BQ6DHV5 1058 aa27.08■■□□□ 1.93
LHX3-201ENST00000371746 C10orf71Q711Q0 1435 aa27.08■■□□□ 1.93
LHX3-201ENST00000371746 ZSCAN29Q8IWY8 852 aaPredicted RBP27.08■■□□□ 1.93
LHX3-201ENST00000371746 DHX58Q96C10 678 aa27.08■■□□□ 1.93
LHX3-201ENST00000371746 BPIFA3Q9BQP9 254 aa27.08■■□□□ 1.93
LHX3-201ENST00000371746 NRBP1Q9UHY1 535 aa27.08■■□□□ 1.93
LHX3-201ENST00000371746 SH3BP5LQ7L8J4 393 aa27.08■■□□□ 1.93
LHX3-201ENST00000371746 TTLL6Q8N841 843 aa27.08■■□□□ 1.93
LHX3-201ENST00000371746 SEC63Q9UGP8 760 aaKnown RBP27.08■■□□□ 1.93
LHX3-201ENST00000371746 KCNF1Q9H3M0 494 aa27.07■■□□□ 1.92
LHX3-201ENST00000371746 MYO3BQ8WXR4 1341 aa27.07■■□□□ 1.92
LHX3-201ENST00000371746 PTGS1P23219 599 aa27.07■■□□□ 1.92
LHX3-201ENST00000371746 IL17AQ16552 155 aa27.07■■□□□ 1.92
LHX3-201ENST00000371746 INF2Q27J81 1249 aa27.07■■□□□ 1.92
LHX3-201ENST00000371746 DAGLBQ8NCG7 672 aa27.07■■□□□ 1.92
LHX3-201ENST00000371746 SUPT20HQ8NEM7 779 aa27.07■■□□□ 1.92
LHX3-201ENST00000371746 IDI2Q9BXS1 227 aa27.07■■□□□ 1.92
LHX3-201ENST00000371746 EHD4Q9H223 541 aa27.07■■□□□ 1.92
LHX3-201ENST00000371746 TDRD3Q9H7E2 651 aaKnown RBP27.07■■□□□ 1.92
LHX3-201ENST00000371746 GPCPD1Q9NPB8 672 aa27.07■■□□□ 1.92
LHX3-201ENST00000371746 GOLGA6L6A8MZA4 724 aa27.06■■□□□ 1.92
LHX3-201ENST00000371746 BMP6P22004 513 aa27.06■■□□□ 1.92
LHX3-201ENST00000371746 ZMYND12Q9H0C1 365 aa27.06■■□□□ 1.92
LHX3-201ENST00000371746 HOOK1Q9UJC3 728 aaKnown RBP27.06■■□□□ 1.92
LHX3-201ENST00000371746 SNHG28P0DPA3 235 aa27.05■■□□□ 1.92
LHX3-201ENST00000371746 NCAPHQ15003 741 aa27.05■■□□□ 1.92
LHX3-201ENST00000371746 GALNT17Q6IS24 598 aa27.05■■□□□ 1.92
LHX3-201ENST00000371746 ELOA2Q8IYF1 753 aaPredicted RBP27.05■■□□□ 1.92
LHX3-201ENST00000371746 RIOX1Q9H6W3 641 aa27.05■■□□□ 1.92
LHX3-201ENST00000371746 ZNF646O15015 1829 aaPredicted RBP27.05■■□□□ 1.92
LHX3-201ENST00000371746 DPEP1P16444 411 aa27.05■■□□□ 1.92
LHX3-201ENST00000371746 CCDC186Q7Z3E2 898 aa27.05■■□□□ 1.92
LHX3-201ENST00000371746 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms