RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 P2RX7Q99572 595 aaKnown RBP16.14■□□□□ 0.17
SSR4-202ENST00000370085 USP26Q9BXU7 913 aa16.14■□□□□ 0.17
SSR4-202ENST00000370085 CPA4Q9UI42 421 aa16.14■□□□□ 0.17
SSR4-202ENST00000370085 FEM1BQ9UK73 627 aa16.14■□□□□ 0.17
SSR4-202ENST00000370085 PRC1O43663 620 aa16.13■□□□□ 0.17
SSR4-202ENST00000370085 CCNA1P78396 465 aa16.13■□□□□ 0.17
SSR4-202ENST00000370085 FGD1P98174 961 aa16.13■□□□□ 0.17
SSR4-202ENST00000370085 CCDC96Q2M329 555 aa16.13■□□□□ 0.17
SSR4-202ENST00000370085 LBX2Q6XYB7 198 aa16.13■□□□□ 0.17
SSR4-202ENST00000370085 CYB5R4Q7L1T6 521 aa16.13■□□□□ 0.17
SSR4-202ENST00000370085 FAM160B2Q86V87 743 aa16.13■□□□□ 0.17
SSR4-202ENST00000370085 PRPF38AQ8NAV1 312 aaKnown RBP16.13■□□□□ 0.17
SSR4-202ENST00000370085 PNMA1Q8ND90 353 aa16.13■□□□□ 0.17
SSR4-202ENST00000370085 ZNF296Q8WUU4 475 aaPredicted RBP16.13■□□□□ 0.17
SSR4-202ENST00000370085 SLF1Q9BQI6 1058 aa16.13■□□□□ 0.17
SSR4-202ENST00000370085 UPF2Q9HAU5 1272 aaKnown RBP16.13■□□□□ 0.17
SSR4-202ENST00000370085 MTMR7Q9Y216 660 aa16.13■□□□□ 0.17
SSR4-202ENST00000370085 RABGAP1Q9Y3P9 1069 aa16.13■□□□□ 0.17
SSR4-202ENST00000370085 WDR19Q8NEZ3 1342 aa16.13■□□□□ 0.17
SSR4-202ENST00000370085 FDX1P10109 184 aa16.12■□□□□ 0.17
SSR4-202ENST00000370085 STAT2P52630 851 aa16.12■□□□□ 0.17
SSR4-202ENST00000370085 KIAA1755Q5JYT7 1200 aa16.12■□□□□ 0.17
SSR4-202ENST00000370085 GPATCH4Q5T3I0 446 aaKnown RBP16.12■□□□□ 0.17
SSR4-202ENST00000370085 SAMD1Q6SPF0 538 aaPredicted RBP16.12■□□□□ 0.17
SSR4-202ENST00000370085 CATIPQ7Z7H3 387 aa16.12■□□□□ 0.17
SSR4-202ENST00000370085 ANKRD13CQ8N6S4 541 aa16.12■□□□□ 0.17
SSR4-202ENST00000370085 GPRC5AQ8NFJ5 357 aa16.12■□□□□ 0.17
SSR4-202ENST00000370085 KCNB2Q92953 911 aa16.12■□□□□ 0.17
SSR4-202ENST00000370085 TAF6LQ9Y6J9 622 aa16.12■□□□□ 0.17
SSR4-202ENST00000370085 ADGRA2Q96PE1 1338 aa16.12■□□□□ 0.17
SSR4-202ENST00000370085 CASP8AP2Q9UKL3 1982 aa16.11■□□□□ 0.17
SSR4-202ENST00000370085 GNRH1P01148 92 aa16.11■□□□□ 0.17
SSR4-202ENST00000370085 BCRP11274 1271 aa16.11■□□□□ 0.17
SSR4-202ENST00000370085 DSG3P32926 999 aa16.11■□□□□ 0.17
SSR4-202ENST00000370085 BLOC1S2Q6QNY1 142 aa16.11■□□□□ 0.17
SSR4-202ENST00000370085 NFXL1Q6ZNB6 911 aa16.11■□□□□ 0.17
SSR4-202ENST00000370085 DHX32Q7L7V1 743 aaKnown RBP16.11■□□□□ 0.17
SSR4-202ENST00000370085 RASEFQ8IZ41 740 aa16.11■□□□□ 0.17
SSR4-202ENST00000370085 JAKMIP1Q96N16 626 aaKnown RBP16.11■□□□□ 0.17
SSR4-202ENST00000370085 NUP88Q99567 741 aaPredicted RBP16.11■□□□□ 0.17
SSR4-202ENST00000370085 PAGR1Q9BTK6 254 aa16.11■□□□□ 0.17
SSR4-202ENST00000370085 R3HDMLQ9H3Y0 253 aa16.11■□□□□ 0.17
SSR4-202ENST00000370085 CWC22Q9HCG8 908 aaKnown RBP16.11■□□□□ 0.17
SSR4-202ENST00000370085 PPP1R9AQ9ULJ8 1098 aa16.11■□□□□ 0.17
SSR4-202ENST00000370085 SNX14Q9Y5W7 946 aa16.11■□□□□ 0.17
SSR4-202ENST00000370085 CCDC69A6NI79 296 aa16.1■□□□□ 0.17
SSR4-202ENST00000370085 SPDYE16A6NNV3 312 aaPredicted RBP16.1■□□□□ 0.17
SSR4-202ENST00000370085 TMEM232C9JQI7 657 aa16.1■□□□□ 0.17
SSR4-202ENST00000370085 PLA2G6O60733 806 aa16.1■□□□□ 0.17
SSR4-202ENST00000370085 ZBED4O75132 1171 aa16.1■□□□□ 0.17
SSR4-202ENST00000370085 PDHBP11177 359 aa16.1■□□□□ 0.17
SSR4-202ENST00000370085 HOXD10P28358 340 aa16.1■□□□□ 0.17
SSR4-202ENST00000370085 FCGRTP55899 365 aa16.1■□□□□ 0.17
SSR4-202ENST00000370085 ANAPC15P60006 121 aa16.1■□□□□ 0.17
SSR4-202ENST00000370085 LACTBP83111 547 aaPredicted RBP16.1■□□□□ 0.17
SSR4-202ENST00000370085 SEC23AQ15436 765 aa16.1■□□□□ 0.17
SSR4-202ENST00000370085 SYNE3Q6ZMZ3 975 aa16.1■□□□□ 0.17
SSR4-202ENST00000370085 CHST3Q7LGC8 479 aa16.1■□□□□ 0.17
SSR4-202ENST00000370085 MORF4L1Q9UBU8 362 aa16.1■□□□□ 0.17
SSR4-202ENST00000370085 LIFRP42702 1097 aa16.09■□□□□ 0.17
SSR4-202ENST00000370085 ERVK-9P63128 1117 aa16.09■□□□□ 0.17
SSR4-202ENST00000370085 ERVK-24P63145 666 aa16.09■□□□□ 0.17
SSR4-202ENST00000370085 ASPRV1Q53RT3 343 aa16.09■□□□□ 0.17
SSR4-202ENST00000370085 KCTD1Q719H9 257 aa16.09■□□□□ 0.17
SSR4-202ENST00000370085 IGDCC4Q8TDY8 1250 aa16.09■□□□□ 0.17
SSR4-202ENST00000370085 KIFC2Q96AC6 838 aa16.09■□□□□ 0.17
SSR4-202ENST00000370085 FMNL1O95466 1100 aaPredicted RBP16.08■□□□□ 0.16
SSR4-202ENST00000370085 PARP1P09874 1014 aaKnown RBP16.08■□□□□ 0.16
SSR4-202ENST00000370085 CALM1P0DP23 149 aa16.08■□□□□ 0.16
SSR4-202ENST00000370085 CALM2P0DP24 149 aa16.08■□□□□ 0.16
SSR4-202ENST00000370085 CALM3P0DP25 149 aa16.08■□□□□ 0.16
SSR4-202ENST00000370085 CASTP20810 708 aaKnown RBP16.08■□□□□ 0.16
SSR4-202ENST00000370085 MAPK4P31152 587 aa16.08■□□□□ 0.16
SSR4-202ENST00000370085 COPB2P35606 906 aa16.08■□□□□ 0.16
SSR4-202ENST00000370085 ANTXR2P58335 489 aa16.08■□□□□ 0.16
SSR4-202ENST00000370085 ZNF543Q08ER8 600 aa16.08■□□□□ 0.16
SSR4-202ENST00000370085 PKN2Q16513 984 aaKnown RBP16.08■□□□□ 0.16
SSR4-202ENST00000370085 ADCK5Q3MIX3 580 aa16.08■□□□□ 0.16
SSR4-202ENST00000370085 C8orf34Q49A92 452 aa16.08■□□□□ 0.16
SSR4-202ENST00000370085 NKX2-3Q8TAU0 364 aa16.08■□□□□ 0.16
SSR4-202ENST00000370085 CD99L2Q8TCZ2 262 aa16.08■□□□□ 0.16
SSR4-202ENST00000370085 COA7Q96BR5 231 aa16.08■□□□□ 0.16
SSR4-202ENST00000370085 ATG4CQ96DT6 458 aa16.08■□□□□ 0.16
SSR4-202ENST00000370085 TM6SF1Q9BZW5 370 aa16.08■□□□□ 0.16
SSR4-202ENST00000370085 EFCC1Q9HA90 598 aa16.08■□□□□ 0.16
SSR4-202ENST00000370085 FBXO28Q9NVF7 368 aa16.08■□□□□ 0.16
SSR4-202ENST00000370085 RBPJLQ9UBG7 517 aa16.08■□□□□ 0.16
SSR4-202ENST00000370085 PNMA2Q9UL42 364 aa16.08■□□□□ 0.16
SSR4-202ENST00000370085 CYP46A1Q9Y6A2 500 aa16.08■□□□□ 0.16
SSR4-202ENST00000370085 PARP14Q460N5 1801 aa16.08■□□□□ 0.16
SSR4-202ENST00000370085 VWA5AO00534 786 aa16.07■□□□□ 0.16
SSR4-202ENST00000370085 SH2B2O14492 632 aaPredicted RBP16.07■□□□□ 0.16
SSR4-202ENST00000370085 SNHG28P0DPA3 235 aa16.07■□□□□ 0.16
SSR4-202ENST00000370085 KIF5BP33176 963 aa16.07■□□□□ 0.16
SSR4-202ENST00000370085 PSMC4P43686 418 aa16.07■□□□□ 0.16
SSR4-202ENST00000370085 PRMT2P55345 433 aa16.07■□□□□ 0.16
SSR4-202ENST00000370085 PLS1Q14651 629 aa16.07■□□□□ 0.16
SSR4-202ENST00000370085 CTU1Q7Z7A3 348 aaKnown RBP16.07■□□□□ 0.16
SSR4-202ENST00000370085 CHMP4CQ96CF2 233 aa16.07■□□□□ 0.16
SSR4-202ENST00000370085 MAP3K14Q99558 947 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms