RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 FSIP1Q8NA03 581 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 MRPS27Q92552 414 aaKnown RBP11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 MXD3Q9BW11 206 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 IL17RBQ9NRM6 502 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 USP40Q9NVE5 1235 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 BTBD18B2RXH4 712 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 FUT2Q10981 343 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 SLC39A14Q15043 492 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 STRIP1Q5VSL9 837 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 EP400NLQ6ZTU2 488 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 PNMA1Q8ND90 353 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 DRC1Q96MC2 740 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 MAP3K14Q99558 947 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 USP17L3A6NCW0 530 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 USP17L4A6NCW7 530 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 CTAGE5O15320 804 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 ECE2O60344 883 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 KINO60870 393 aaKnown RBP11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 GNAQP50148 359 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 FKBP1AP62942 108 aaKnown RBP11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 FAM160A1Q05DH4 1040 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 USP17L1Q7RTZ2 530 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 LRRC8AQ8IWT6 810 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 PNMA6AP0CW24 399 aaPredicted RBP11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 PTPN21Q16825 1174 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 GRIPAP1Q4V328 841 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 SLC16A10Q8TF71 515 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 ERO1AQ96HE7 468 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 BRMS1Q9HCU9 246 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 STX8Q9UNK0 236 aa11.38□□□□□ -0.59
PRPF38B-203ENST00000370025 ATP2B1P20020 1258 aa11.37□□□□□ -0.59
PRPF38B-203ENST00000370025 NEDD1Q8NHV4 660 aa11.37□□□□□ -0.59
PRPF38B-203ENST00000370025 C7orf43Q8WVR3 580 aa11.37□□□□□ -0.59
PRPF38B-203ENST00000370025 MYO1CO00159 1063 aa11.37□□□□□ -0.59
PRPF38B-203ENST00000370025 PKN1Q16512 942 aa11.37□□□□□ -0.59
PRPF38B-203ENST00000370025 TMCO3Q6UWJ1 677 aa11.37□□□□□ -0.59
PRPF38B-203ENST00000370025 SRBD1Q8N5C6 995 aaKnown RBP11.37□□□□□ -0.59
PRPF38B-203ENST00000370025 MRIQ9BWK5 157 aa11.37□□□□□ -0.59
PRPF38B-203ENST00000370025 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.37□□□□□ -0.59
PRPF38B-203ENST00000370025 PRR29P0C7W0 189 aa11.37□□□□□ -0.59
PRPF38B-203ENST00000370025 CRKP46108 304 aa11.37□□□□□ -0.59
PRPF38B-203ENST00000370025 E2F4Q16254 413 aa11.37□□□□□ -0.59
PRPF38B-203ENST00000370025 ZSCAN26Q16670 478 aa11.37□□□□□ -0.59
PRPF38B-203ENST00000370025 RILPL1Q5EBL4 403 aa11.37□□□□□ -0.59
PRPF38B-203ENST00000370025 TTLL6Q8N841 843 aa11.37□□□□□ -0.59
PRPF38B-203ENST00000370025 GOLPH3LQ9H4A5 285 aa11.37□□□□□ -0.59
PRPF38B-203ENST00000370025 ZSWIM4Q9H7M6 989 aa11.37□□□□□ -0.59
PRPF38B-203ENST00000370025 VPS54Q9P1Q0 977 aa11.37□□□□□ -0.59
PRPF38B-203ENST00000370025 FHOD1Q9Y613 1164 aa11.37□□□□□ -0.59
PRPF38B-203ENST00000370025 CNTNAP5Q8WYK1 1306 aa11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 FOCADQ5VW36 1801 aa11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 PPP6R2O75170 966 aa11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 PLA2G4AP47712 749 aa11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 SNW1Q13573 536 aaKnown RBP11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 AOC3Q16853 763 aa11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 KCNQ5Q9NR82 932 aa11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 hCG_1642624A0A1W2PR95 340 aa11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 C21orf2O43822 256 aa11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 WDHD1O75717 1129 aaPredicted RBP11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 KRT2P35908 639 aa11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 RBM5P52756 815 aaKnown RBP eCLIP11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 HDLBPQ00341 1268 aaKnown RBP11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 CDC42EP5Q6NZY7 148 aa11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 RBM43Q6ZSC3 357 aaKnown RBP11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 KIAA0825Q8IV33 1275 aa11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 UBXN4Q92575 508 aa11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 PDGFDQ9GZP0 370 aaPredicted RBP11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 HLA-DOAP06340 250 aa11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 GRM4Q14833 912 aa11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 HSP90AA4PQ58FG1 418 aa11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 DACT2Q5SW24 774 aa11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 MNS1Q8NEH6 495 aa11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 ENGASEQ8NFI3 743 aa11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 ZDHHC15Q96MV8 337 aa11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 TMEM47Q9BQJ4 181 aa11.36□□□□□ -0.59
PRPF38B-203ENST00000370025 DDX60LQ5H9U9 1706 aaKnown RBP11.35□□□□□ -0.59
PRPF38B-203ENST00000370025 BIN1O00499 593 aa11.35□□□□□ -0.59
PRPF38B-203ENST00000370025 PPIP5K2O43314 1243 aa11.35□□□□□ -0.59
PRPF38B-203ENST00000370025 URI1O94763 535 aaPredicted RBP11.35□□□□□ -0.59
PRPF38B-203ENST00000370025 SCG2P13521 617 aa11.35□□□□□ -0.59
PRPF38B-203ENST00000370025 MARCKSP29966 332 aaPredicted RBP11.35□□□□□ -0.59
PRPF38B-203ENST00000370025 SYCP1Q15431 976 aa11.35□□□□□ -0.59
PRPF38B-203ENST00000370025 APOBEC3HQ6NTF7 200 aaKnown RBP11.35□□□□□ -0.59
PRPF38B-203ENST00000370025 PHF20Q9BVI0 1012 aa11.35□□□□□ -0.59
PRPF38B-203ENST00000370025 PLEKHA4Q9H4M7 779 aa11.35□□□□□ -0.59
PRPF38B-203ENST00000370025 DNAI1Q9UI46 699 aa11.35□□□□□ -0.59
PRPF38B-203ENST00000370025 A0A1B0GVL5 298 aa11.35□□□□□ -0.59
PRPF38B-203ENST00000370025 CMA1P23946 247 aa11.35□□□□□ -0.59
PRPF38B-203ENST00000370025 OAS2P29728 719 aaKnown RBP11.35□□□□□ -0.59
PRPF38B-203ENST00000370025 RTKN2Q8IZC4 609 aa11.35□□□□□ -0.59
PRPF38B-203ENST00000370025 LZTS2Q9BRK4 669 aa11.35□□□□□ -0.59
PRPF38B-203ENST00000370025 SWAP70Q9UH65 585 aa11.35□□□□□ -0.59
PRPF38B-203ENST00000370025 CEP131Q9UPN4 1083 aa11.35□□□□□ -0.59
PRPF38B-203ENST00000370025 NR5A1Q13285 461 aa11.34□□□□□ -0.59
PRPF38B-203ENST00000370025 PTPAQ15257 358 aa11.34□□□□□ -0.59
PRPF38B-203ENST00000370025 CCDC93Q567U6 631 aa11.34□□□□□ -0.59
PRPF38B-203ENST00000370025 SDF4Q9BRK5 362 aa11.34□□□□□ -0.59
PRPF38B-203ENST00000370025 OSBPL5Q9H0X9 879 aaPredicted RBP11.34□□□□□ -0.59
PRPF38B-203ENST00000370025 DDX4Q9NQI0 724 aaKnown RBP11.34□□□□□ -0.59
PRPF38B-203ENST00000370025 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms