RNA–Protein interactions for RNA: ENST00000369220.8

CCNC-203, Transcript of cyclin C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCNC, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-203ENST00000369220 USP17L15C9J2P7 530 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 USP17L13C9JLJ4 530 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 USP17L11C9JVI0 530 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 USP17L18D6R9N7 530 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 USP17L22D6RA61 530 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 USP17L17D6RBQ6 530 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 USP17L19D6RCP7 530 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 USP17L20D6RJB6 530 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 SH2B2O14492 632 aaPredicted RBP12.11□□□□□ -0.47
CCNC-203ENST00000369220 HSPA8P11142 646 aaKnown RBP12.11□□□□□ -0.47
CCNC-203ENST00000369220 EXOSC10Q01780 885 aaKnown RBP12.11□□□□□ -0.47
CCNC-203ENST00000369220 USP17L24Q0WX57 530 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 KRT32Q14532 448 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 DHX32Q7L7V1 743 aaKnown RBP12.11□□□□□ -0.47
CCNC-203ENST00000369220 RAB11FIP4Q86YS3 637 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 ANKRD13CQ8N6S4 541 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 KAT14Q9H8E8 782 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 ZFYVE28Q9HCC9 887 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 ZCCHC17Q9NP64 241 aaKnown RBP12.11□□□□□ -0.47
CCNC-203ENST00000369220 SLC45A1Q9Y2W3 748 aa12.11□□□□□ -0.47
CCNC-203ENST00000369220 RXRAP19793 462 aa12.1□□□□□ -0.47
CCNC-203ENST00000369220 SLC16A2P36021 539 aa12.1□□□□□ -0.47
CCNC-203ENST00000369220 NT5C2P49902 561 aa12.1□□□□□ -0.47
CCNC-203ENST00000369220 WTAPQ15007 396 aa12.1□□□□□ -0.47
CCNC-203ENST00000369220 TTBK2Q6IQ55 1244 aa12.1□□□□□ -0.47
CCNC-203ENST00000369220 ZNF296Q8WUU4 475 aaPredicted RBP12.1□□□□□ -0.47
CCNC-203ENST00000369220 ANKS1AQ92625 1134 aa12.1□□□□□ -0.47
CCNC-203ENST00000369220 ATG4CQ96DT6 458 aa12.1□□□□□ -0.47
CCNC-203ENST00000369220 GMCL1Q96IK5 515 aa12.1□□□□□ -0.47
CCNC-203ENST00000369220 CFHR5Q9BXR6 569 aa12.1□□□□□ -0.47
CCNC-203ENST00000369220 SYNPO2Q9UMS6 1093 aa12.1□□□□□ -0.47
CCNC-203ENST00000369220 ERICH2A1L162 156 aa12.1□□□□□ -0.47
CCNC-203ENST00000369220 GPR25O00155 361 aa12.1□□□□□ -0.47
CCNC-203ENST00000369220 BMP3P12645 472 aa12.1□□□□□ -0.47
CCNC-203ENST00000369220 SART3Q15020 963 aaKnown RBP12.1□□□□□ -0.47
CCNC-203ENST00000369220 BLOC1S2Q6QNY1 142 aa12.1□□□□□ -0.47
CCNC-203ENST00000369220 C17orf99Q6UX52 265 aa12.1□□□□□ -0.47
CCNC-203ENST00000369220 PAGR1Q9BTK6 254 aa12.1□□□□□ -0.47
CCNC-203ENST00000369220 PNMA3Q9UL41 463 aa12.1□□□□□ -0.47
CCNC-203ENST00000369220 PARP14Q460N5 1801 aa12.09□□□□□ -0.47
CCNC-203ENST00000369220 TMEM232C9JQI7 657 aa12.09□□□□□ -0.47
CCNC-203ENST00000369220 SNHG28P0DPA3 235 aa12.09□□□□□ -0.47
CCNC-203ENST00000369220 BCRP11274 1271 aa12.09□□□□□ -0.47
CCNC-203ENST00000369220 OSBPP22059 807 aa12.09□□□□□ -0.47
CCNC-203ENST00000369220 CTGFP29279 349 aa12.09□□□□□ -0.47
CCNC-203ENST00000369220 TROAPQ12815 778 aa12.09□□□□□ -0.47
CCNC-203ENST00000369220 PABPC4Q13310 644 aaKnown RBP eCLIP12.09□□□□□ -0.477e-7■■■■■ 67.8
CCNC-203ENST00000369220 COG2Q14746 738 aa12.09□□□□□ -0.47
CCNC-203ENST00000369220 CCDC96Q2M329 555 aa12.09□□□□□ -0.47
CCNC-203ENST00000369220 KIFC2Q96AC6 838 aa12.09□□□□□ -0.47
CCNC-203ENST00000369220 LARP6Q9BRS8 491 aaKnown RBP12.09□□□□□ -0.47
CCNC-203ENST00000369220 BACH2Q9BYV9 841 aa12.09□□□□□ -0.47
CCNC-203ENST00000369220 ARHGAP39Q9C0H5 1083 aa12.09□□□□□ -0.47
CCNC-203ENST00000369220 GPCPD1Q9NPB8 672 aa12.09□□□□□ -0.47
CCNC-203ENST00000369220 BTBD7Q9P203 1132 aa12.09□□□□□ -0.47
CCNC-203ENST00000369220 RBPJLQ9UBG7 517 aa12.09□□□□□ -0.47
CCNC-203ENST00000369220 ZSWIM8A7E2V4 1837 aa12.09□□□□□ -0.47
CCNC-203ENST00000369220 BAZ2BQ9UIF8 2168 aaKnown RBP12.09□□□□□ -0.47
CCNC-203ENST00000369220 RPS6KB1P23443 525 aa12.08□□□□□ -0.47
CCNC-203ENST00000369220 SNAP25P60880 206 aa12.08□□□□□ -0.47
CCNC-203ENST00000369220 Q3C1V9 767 aa12.08□□□□□ -0.47
CCNC-203ENST00000369220 PPP4R3BQ5MIZ7 849 aa12.08□□□□□ -0.47
CCNC-203ENST00000369220 STAG2Q8N3U4 1231 aa12.08□□□□□ -0.47
CCNC-203ENST00000369220 TMEM87BQ96K49 555 aa12.08□□□□□ -0.47
CCNC-203ENST00000369220 ZSWIM6Q9HCJ5 1215 aa12.08□□□□□ -0.47
CCNC-203ENST00000369220 PPP1R9AQ9ULJ8 1098 aa12.08□□□□□ -0.47
CCNC-203ENST00000369220 STAT2P52630 851 aa12.08□□□□□ -0.48
CCNC-203ENST00000369220 ZNF543Q08ER8 600 aa12.08□□□□□ -0.48
CCNC-203ENST00000369220 IKQ13123 557 aaPredicted RBP12.08□□□□□ -0.48
CCNC-203ENST00000369220 Q6ZUG5 572 aa12.08□□□□□ -0.48
CCNC-203ENST00000369220 RUFY3Q7L099 469 aa12.08□□□□□ -0.48
CCNC-203ENST00000369220 CCDC144CPQ8IYA2 1237 aa12.08□□□□□ -0.48
CCNC-203ENST00000369220 BRF1Q92994 677 aa12.08□□□□□ -0.48
CCNC-203ENST00000369220 KIF2CQ99661 725 aa12.08□□□□□ -0.48
CCNC-203ENST00000369220 UBA5Q9GZZ9 404 aa12.08□□□□□ -0.48
CCNC-203ENST00000369220 BRPF3Q9ULD4 1205 aa12.08□□□□□ -0.48
CCNC-203ENST00000369220 CNMDO75829 334 aa12.07□□□□□ -0.48
CCNC-203ENST00000369220 HMGB1P09429 215 aaKnown RBP12.07□□□□□ -0.48
CCNC-203ENST00000369220 TAL1P17542 331 aaPredicted RBP12.07□□□□□ -0.48
CCNC-203ENST00000369220 DSG3P32926 999 aa12.07□□□□□ -0.48
CCNC-203ENST00000369220 CCDC178Q5BJE1 867 aa12.07□□□□□ -0.48
CCNC-203ENST00000369220 LBX2Q6XYB7 198 aa12.07□□□□□ -0.48
CCNC-203ENST00000369220 NFXL1Q6ZNB6 911 aa12.07□□□□□ -0.48
CCNC-203ENST00000369220 MICU3Q86XE3 530 aa12.07□□□□□ -0.48
CCNC-203ENST00000369220 ZNF654Q8IZM8 581 aa12.07□□□□□ -0.48
CCNC-203ENST00000369220 NUP133Q8WUM0 1156 aa12.07□□□□□ -0.48
CCNC-203ENST00000369220 SLF1Q9BQI6 1058 aa12.07□□□□□ -0.48
CCNC-203ENST00000369220 C22orf23Q9BZE7 217 aa12.07□□□□□ -0.48
CCNC-203ENST00000369220 PORCNQ9H237 461 aa12.07□□□□□ -0.48
CCNC-203ENST00000369220 VWA5AO00534 786 aa12.07□□□□□ -0.48
CCNC-203ENST00000369220 PSMA5P28066 241 aa12.07□□□□□ -0.48
CCNC-203ENST00000369220 LIFRP42702 1097 aa12.07□□□□□ -0.48
CCNC-203ENST00000369220 CTCFP49711 727 aaPredicted RBP12.07□□□□□ -0.48
CCNC-203ENST00000369220 ANAPC15P60006 121 aa12.07□□□□□ -0.48
CCNC-203ENST00000369220 SP3Q02447 781 aa12.07□□□□□ -0.48
CCNC-203ENST00000369220 TMEM132BQ14DG7 1078 aa12.07□□□□□ -0.48
CCNC-203ENST00000369220 FAM110CQ1W6H9 321 aa12.07□□□□□ -0.48
CCNC-203ENST00000369220 SLC35G1Q2M3R5 365 aa12.07□□□□□ -0.48
CCNC-203ENST00000369220 APOA5Q6Q788 366 aa12.07□□□□□ -0.48
CCNC-203ENST00000369220 NBPF11Q86T75 865 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms