RNA–Protein interactions for RNA: ENST00000368984.7

HTRA1-201, Transcript of HtrA serine peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTRA1, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA1-201ENST00000368984 USP17L2Q6R6M4 530 aa28.09■■■□□ 2.09
HTRA1-201ENST00000368984 PDILTQ8N807 584 aa28.09■■■□□ 2.09
HTRA1-201ENST00000368984 OSBPL5Q9H0X9 879 aaPredicted RBP28.09■■■□□ 2.09
HTRA1-201ENST00000368984 BARHL2Q9NY43 387 aa28.09■■■□□ 2.09
HTRA1-201ENST00000368984 HOOK1Q9UJC3 728 aaKnown RBP28.09■■■□□ 2.09
HTRA1-201ENST00000368984 EN1Q05925 392 aaPredicted RBP28.09■■■□□ 2.09
HTRA1-201ENST00000368984 POSTNQ15063 836 aa28.09■■■□□ 2.09
HTRA1-201ENST00000368984 EPSTI1Q96J88 318 aa28.09■■■□□ 2.09
HTRA1-201ENST00000368984 CPVLQ9H3G5 476 aa28.09■■■□□ 2.09
HTRA1-201ENST00000368984 STXBP3O00186 592 aa28.08■■■□□ 2.09
HTRA1-201ENST00000368984 CRKP46108 304 aa28.08■■■□□ 2.09
HTRA1-201ENST00000368984 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.08■■■□□ 2.09
HTRA1-201ENST00000368984 MTMR4Q9NYA4 1195 aa28.08■■■□□ 2.09
HTRA1-201ENST00000368984 SERPINB13Q9UIV8 391 aa28.08■■■□□ 2.09
HTRA1-201ENST00000368984 AKR1B1P15121 316 aa28.07■■■□□ 2.08
HTRA1-201ENST00000368984 NT5DC1Q5TFE4 455 aa28.07■■■□□ 2.08
HTRA1-201ENST00000368984 STRIP1Q5VSL9 837 aa28.07■■■□□ 2.08
HTRA1-201ENST00000368984 HEATR3Q7Z4Q2 680 aa28.07■■■□□ 2.08
HTRA1-201ENST00000368984 DAGLBQ8NCG7 672 aa28.07■■■□□ 2.08
HTRA1-201ENST00000368984 C7orf43Q8WVR3 580 aa28.07■■■□□ 2.08
HTRA1-201ENST00000368984 A0A087X0B3 334 aa28.07■■■□□ 2.08
HTRA1-201ENST00000368984 IGKV6D-41A0A0C4DH26 115 aa28.07■■■□□ 2.08
HTRA1-201ENST00000368984 PRR29P0C7W0 189 aa28.07■■■□□ 2.08
HTRA1-201ENST00000368984 BMP6P22004 513 aa28.07■■■□□ 2.08
HTRA1-201ENST00000368984 POTEAQ6S8J7 498 aa28.07■■■□□ 2.08
HTRA1-201ENST00000368984 CCDC148Q8NFR7 591 aa28.07■■■□□ 2.08
HTRA1-201ENST00000368984 SYMPKQ92797 1274 aaKnown RBP28.07■■■□□ 2.08
HTRA1-201ENST00000368984 CNKSR1Q969H4 720 aa28.07■■■□□ 2.08
HTRA1-201ENST00000368984 ZDHHC15Q96MV8 337 aa28.07■■■□□ 2.08
HTRA1-201ENST00000368984 ZNF219Q9P2Y4 722 aaPredicted RBP28.07■■■□□ 2.08
HTRA1-201ENST00000368984 SMTNL1A8MU46 457 aa28.06■■■□□ 2.08
HTRA1-201ENST00000368984 IKBKBO14920 756 aa28.06■■■□□ 2.08
HTRA1-201ENST00000368984 SMARCA1P28370 1054 aa28.06■■■□□ 2.08
HTRA1-201ENST00000368984 SARSP49591 514 aaKnown RBP28.06■■■□□ 2.08
HTRA1-201ENST00000368984 FKBP1AP62942 108 aaKnown RBP28.06■■■□□ 2.08
HTRA1-201ENST00000368984 DACT2Q5SW24 774 aa28.06■■■□□ 2.08
HTRA1-201ENST00000368984 GALNT17Q6IS24 598 aa28.06■■■□□ 2.08
HTRA1-201ENST00000368984 RASGRP4Q8TDF6 673 aa28.06■■■□□ 2.08
HTRA1-201ENST00000368984 MRIQ9BWK5 157 aa28.06■■■□□ 2.08
HTRA1-201ENST00000368984 SWAP70Q9UH65 585 aa28.06■■■□□ 2.08
HTRA1-201ENST00000368984 ECE2O60344 883 aa28.06■■■□□ 2.08
HTRA1-201ENST00000368984 NFIAQ12857 509 aa28.06■■■□□ 2.08
HTRA1-201ENST00000368984 CCDC144BQ3MJ40 725 aa28.06■■■□□ 2.08
HTRA1-201ENST00000368984 KANK3Q6NY19 840 aa28.06■■■□□ 2.08
HTRA1-201ENST00000368984 PYCARDQ9ULZ3 195 aa28.06■■■□□ 2.08
HTRA1-201ENST00000368984 PCDHA6Q9UN73 950 aa28.06■■■□□ 2.08
HTRA1-201ENST00000368984 PCDHA8Q9Y5H6 950 aa28.06■■■□□ 2.08
HTRA1-201ENST00000368984 SCN9AQ15858 1988 aa28.05■■■□□ 2.08
HTRA1-201ENST00000368984 MCM7P33993 719 aa28.05■■■□□ 2.08
HTRA1-201ENST00000368984 KIAA0825Q8IV33 1275 aa28.05■■■□□ 2.08
HTRA1-201ENST00000368984 FAM177A1Q8N128 213 aaPredicted RBP28.05■■■□□ 2.08
HTRA1-201ENST00000368984 KIAA1524Q8TCG1 905 aa28.05■■■□□ 2.08
HTRA1-201ENST00000368984 STK32BQ9NY57 414 aa28.05■■■□□ 2.08
HTRA1-201ENST00000368984 VWA3AA6NCI4 1184 aa28.04■■■□□ 2.08
HTRA1-201ENST00000368984 USP17L5A8MUK1 530 aa28.04■■■□□ 2.08
HTRA1-201ENST00000368984 NOLC1Q14978 699 aaKnown RBP eCLIP28.04■■■□□ 2.08
HTRA1-201ENST00000368984 GRAMD1CQ8IYS0 662 aa28.04■■■□□ 2.08
HTRA1-201ENST00000368984 HSD3B7Q9H2F3 369 aa28.04■■■□□ 2.08
HTRA1-201ENST00000368984 MAN1B1Q9UKM7 699 aa28.04■■■□□ 2.08
HTRA1-201ENST00000368984 MYO3BQ8WXR4 1341 aa28.04■■■□□ 2.08
HTRA1-201ENST00000368984 PDHBP11177 359 aa28.04■■■□□ 2.08
HTRA1-201ENST00000368984 SHMT1P34896 483 aa28.04■■■□□ 2.08
HTRA1-201ENST00000368984 C17orf53Q8N3J3 647 aaPredicted RBP28.04■■■□□ 2.08
HTRA1-201ENST00000368984 C4orf32Q8N8J7 132 aa28.04■■■□□ 2.08
HTRA1-201ENST00000368984 IL17AQ16552 155 aa28.03■■■□□ 2.08
HTRA1-201ENST00000368984 DHX58Q96C10 678 aa28.03■■■□□ 2.08
HTRA1-201ENST00000368984 PCDHAC2Q9Y5I4 1007 aa28.03■■■□□ 2.08
HTRA1-201ENST00000368984 ZFPM1Q8IX07 1006 aa28.03■■■□□ 2.08
HTRA1-201ENST00000368984 SPATA20Q8TB22 786 aa28.03■■■□□ 2.08
HTRA1-201ENST00000368984 ZMYND12Q9H0C1 365 aa28.03■■■□□ 2.08
HTRA1-201ENST00000368984 NAP1L5Q96NT1 182 aaPredicted RBP28.02■■■□□ 2.08
HTRA1-201ENST00000368984 SPTLC3Q9NUV7 552 aa28.02■■■□□ 2.08
HTRA1-201ENST00000368984 ZNF646O15015 1829 aaPredicted RBP28.02■■■□□ 2.08
HTRA1-201ENST00000368984 SLFN14P0C7P3 912 aa28.01■■■□□ 2.08
HTRA1-201ENST00000368984 TPM4P67936 248 aa28.01■■■□□ 2.08
HTRA1-201ENST00000368984 SMARCE1Q969G3 411 aa28.01■■■□□ 2.08
HTRA1-201ENST00000368984 RRP36Q96EU6 259 aaKnown RBP28.01■■■□□ 2.08
HTRA1-201ENST00000368984 MYH8P13535 1937 aa28.01■■■□□ 2.07
HTRA1-201ENST00000368984 CCDC194A0A1B0GVG4 234 aa28.01■■■□□ 2.07
HTRA1-201ENST00000368984 HLA-DOAP06340 250 aa28.01■■■□□ 2.07
HTRA1-201ENST00000368984 HDLBPQ00341 1268 aaKnown RBP28.01■■■□□ 2.07
HTRA1-201ENST00000368984 LRMPQ12912 555 aa28.01■■■□□ 2.07
HTRA1-201ENST00000368984 ARL6IP4Q66PJ3 421 aaKnown RBP28.01■■■□□ 2.07
HTRA1-201ENST00000368984 SH3RF1Q7Z6J0 888 aa28.01■■■□□ 2.07
HTRA1-201ENST00000368984 HOMER1Q86YM7 354 aa28.01■■■□□ 2.07
HTRA1-201ENST00000368984 CLEC10AQ8IUN9 316 aa28.01■■■□□ 2.07
HTRA1-201ENST00000368984 LRRC47Q8N1G4 583 aaKnown RBP28.01■■■□□ 2.07
HTRA1-201ENST00000368984 RIOX1Q9H6W3 641 aa28.01■■■□□ 2.07
HTRA1-201ENST00000368984 SNHG28P0DPA3 235 aa28■■■□□ 2.07
HTRA1-201ENST00000368984 EIF6P56537 245 aaKnown RBP28■■■□□ 2.07
HTRA1-201ENST00000368984 MYL5Q02045 173 aa28■■■□□ 2.07
HTRA1-201ENST00000368984 MORC3Q14149 939 aa28■■■□□ 2.07
HTRA1-201ENST00000368984 AOC3Q16853 763 aa28■■■□□ 2.07
HTRA1-201ENST00000368984 UBA5Q9GZZ9 404 aa28■■■□□ 2.07
HTRA1-201ENST00000368984 CACTINQ8WUQ7 758 aaKnown RBP28■■■□□ 2.07
HTRA1-201ENST00000368984 PIGSQ96S52 555 aa28■■■□□ 2.07
HTRA1-201ENST00000368984 EHD4Q9H223 541 aa28■■■□□ 2.07
HTRA1-201ENST00000368984 VAT1LQ9HCJ6 419 aa28■■■□□ 2.07
HTRA1-201ENST00000368984 TTLL1O95922 423 aa27.99■■■□□ 2.07
HTRA1-201ENST00000368984 LMOD1P29536 600 aaPredicted RBP27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms