RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 C16orf86Q6ZW13 317 aa12.19□□□□□ -0.46
TPM3-212ENST00000368533 MIGA2Q7L4E1 593 aa12.19□□□□□ -0.46
TPM3-212ENST00000368533 CDK5RAP2Q96SN8 1893 aa12.19□□□□□ -0.46
TPM3-212ENST00000368533 SH3BP5LQ7L8J4 393 aa12.19□□□□□ -0.46
TPM3-212ENST00000368533 NIM1KQ8IY84 436 aa12.19□□□□□ -0.46
TPM3-212ENST00000368533 SLC16A10Q8TF71 515 aa12.19□□□□□ -0.46
TPM3-212ENST00000368533 GPCPD1Q9NPB8 672 aa12.19□□□□□ -0.46
TPM3-212ENST00000368533 ZNF75DP51815 510 aa12.18□□□□□ -0.46
TPM3-212ENST00000368533 PKN1Q16512 942 aa12.18□□□□□ -0.46
TPM3-212ENST00000368533 CCDC84Q86UT8 332 aaPredicted RBP12.18□□□□□ -0.46
TPM3-212ENST00000368533 SECISBP2LQ93073 1101 aaKnown RBP12.18□□□□□ -0.46
TPM3-212ENST00000368533 CLIC6Q96NY7 704 aa12.18□□□□□ -0.46
TPM3-212ENST00000368533 GOLPH3LQ9H4A5 285 aa12.18□□□□□ -0.46
TPM3-212ENST00000368533 DNAJC18Q9H819 358 aa12.18□□□□□ -0.46
TPM3-212ENST00000368533 CABP5Q9NP86 173 aa12.18□□□□□ -0.46
TPM3-212ENST00000368533 CCDC196A0A1B0GTZ2 297 aa12.18□□□□□ -0.46
TPM3-212ENST00000368533 USP17L5A8MUK1 530 aa12.18□□□□□ -0.46
TPM3-212ENST00000368533 CXCL9Q07325 125 aa12.18□□□□□ -0.46
TPM3-212ENST00000368533 TMTC3Q6ZXV5 915 aa12.18□□□□□ -0.46
TPM3-212ENST00000368533 RTKN2Q8IZC4 609 aa12.18□□□□□ -0.46
TPM3-212ENST00000368533 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.18□□□□□ -0.46
TPM3-212ENST00000368533 SNED1Q8TER0 1413 aa12.18□□□□□ -0.46
TPM3-212ENST00000368533 DEXIO95424 95 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 TNNT1P13805 278 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 SLC16A2P36021 539 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 SLC35G1Q2M3R5 365 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 NBPF9Q3BBW0 867 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 KMT5BQ4FZB7 885 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 HHIPL2Q6UWX4 724 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 C11orf57Q6ZUT1 292 aaPredicted RBP12.17□□□□□ -0.46
TPM3-212ENST00000368533 FILIP1Q7Z7B0 1213 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 ZDHHC15Q96MV8 337 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 TAOK3Q9H2K8 898 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 RGPD3A6NKT7 1758 aaPredicted RBP12.17□□□□□ -0.46
TPM3-212ENST00000368533 RGPD4Q7Z3J3 1758 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 WNT7AO00755 349 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 HEATR3Q7Z4Q2 680 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 RCOR1Q9UKL0 485 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 PCDHA7Q9UN72 937 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 ASTN2O75129 1339 aaPredicted RBP12.17□□□□□ -0.46
TPM3-212ENST00000368533 CNTNAP5Q8WYK1 1306 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 NFKBIEO00221 500 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 HLA-DOAP06340 250 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 TAL1P17542 331 aaPredicted RBP12.17□□□□□ -0.46
TPM3-212ENST00000368533 SHMT1P34896 483 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 HNRNPH2P55795 449 aaKnown RBP12.17□□□□□ -0.46
TPM3-212ENST00000368533 SNAP25P60880 206 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 OGFOD1Q8N543 542 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 SUPT20HQ8NEM7 779 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 FZD1Q9UP38 647 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 LAMB1P07942 1786 aa12.17□□□□□ -0.46
TPM3-212ENST00000368533 DDX60LQ5H9U9 1706 aaKnown RBP12.17□□□□□ -0.46
TPM3-212ENST00000368533 BIN1O00499 593 aa12.16□□□□□ -0.46
TPM3-212ENST00000368533 CYTH3O43739 400 aa12.16□□□□□ -0.46
TPM3-212ENST00000368533 FUT2Q10981 343 aa12.16□□□□□ -0.46
TPM3-212ENST00000368533 ZYXQ15942 572 aaKnown RBP12.16□□□□□ -0.46
TPM3-212ENST00000368533 STX1AQ16623 288 aa12.16□□□□□ -0.46
TPM3-212ENST00000368533 PRAMEF18Q5VWM3 479 aa12.16□□□□□ -0.46
TPM3-212ENST00000368533 RSBN1LQ6PCB5 846 aaPredicted RBP12.16□□□□□ -0.46
TPM3-212ENST00000368533 KCTD1Q719H9 257 aa12.16□□□□□ -0.46
TPM3-212ENST00000368533 KRT222Q8N1A0 295 aa12.16□□□□□ -0.46
TPM3-212ENST00000368533 JDP2Q8WYK2 163 aa12.16□□□□□ -0.46
TPM3-212ENST00000368533 CSRNP1Q96S65 589 aa12.16□□□□□ -0.46
TPM3-212ENST00000368533 TMEM39BQ9GZU3 492 aa12.16□□□□□ -0.46
TPM3-212ENST00000368533 MORC2Q9Y6X9 1032 aaPredicted RBP12.16□□□□□ -0.46
TPM3-212ENST00000368533 MMP1P03956 469 aa12.16□□□□□ -0.46
TPM3-212ENST00000368533 GRIN1Q05586 938 aa12.16□□□□□ -0.46
TPM3-212ENST00000368533 DLGAP5Q15398 846 aa12.16□□□□□ -0.46
TPM3-212ENST00000368533 SAFBQ15424 915 aaKnown RBP eCLIP12.16□□□□□ -0.46
TPM3-212ENST00000368533 TTBK2Q6IQ55 1244 aa12.16□□□□□ -0.46
TPM3-212ENST00000368533 SAMD7Q7Z3H4 446 aa12.16□□□□□ -0.46
TPM3-212ENST00000368533 UIMC1Q96RL1 719 aa12.16□□□□□ -0.46
TPM3-212ENST00000368533 MAD2L2Q9UI95 211 aa12.16□□□□□ -0.46
TPM3-212ENST00000368533 PCDHB6Q9Y5E3 794 aa12.16□□□□□ -0.46
TPM3-212ENST00000368533 KLRF2D3W0D1 207 aa12.15□□□□□ -0.46
TPM3-212ENST00000368533 CTAGE5O15320 804 aa12.15□□□□□ -0.46
TPM3-212ENST00000368533 PRELPP51888 382 aa12.15□□□□□ -0.46
TPM3-212ENST00000368533 NLRP5P59047 1200 aa12.15□□□□□ -0.46
TPM3-212ENST00000368533 JAG1P78504 1218 aa12.15□□□□□ -0.46
TPM3-212ENST00000368533 FAM160A1Q05DH4 1040 aa12.15□□□□□ -0.46
TPM3-212ENST00000368533 ANO1Q5XXA6 986 aa12.15□□□□□ -0.46
TPM3-212ENST00000368533 ISM2Q6H9L7 571 aa12.15□□□□□ -0.46
TPM3-212ENST00000368533 TYW1BQ6NUM6 668 aa12.15□□□□□ -0.46
TPM3-212ENST00000368533 SPICE1Q8N0Z3 855 aa12.15□□□□□ -0.46
TPM3-212ENST00000368533 NUP88Q99567 741 aaPredicted RBP12.15□□□□□ -0.46
TPM3-212ENST00000368533 DDAH1O94760 285 aa12.15□□□□□ -0.46
TPM3-212ENST00000368533 PCP11498 1178 aaKnown RBP12.15□□□□□ -0.46
TPM3-212ENST00000368533 SEPT2Q15019 361 aa12.15□□□□□ -0.46
TPM3-212ENST00000368533 TPD52L1Q16890 204 aaPredicted RBP12.15□□□□□ -0.46
TPM3-212ENST00000368533 CCDC96Q2M329 555 aa12.15□□□□□ -0.46
TPM3-212ENST00000368533 CCDC112Q8NEF3 446 aa12.15□□□□□ -0.46
TPM3-212ENST00000368533 NEDD1Q8NHV4 660 aa12.15□□□□□ -0.46
TPM3-212ENST00000368533 MYH6P13533 1939 aa12.15□□□□□ -0.46
TPM3-212ENST00000368533 SPTLC2O15270 562 aa12.15□□□□□ -0.47
TPM3-212ENST00000368533 RRP1BQ14684 758 aaKnown RBP12.15□□□□□ -0.47
TPM3-212ENST00000368533 TBC1D10BQ4KMP7 808 aaPredicted RBP12.15□□□□□ -0.47
TPM3-212ENST00000368533 DGKHQ86XP1 1220 aa12.15□□□□□ -0.47
TPM3-212ENST00000368533 AOPEPQ8N6M6 819 aa12.15□□□□□ -0.47
TPM3-212ENST00000368533 LINC00301Q8NCQ3 95 aa12.15□□□□□ -0.47
TPM3-212ENST00000368533 RGS22Q8NE09 1264 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms