RNA–Protein interactions for RNA: ENST00000368453.8

SHC1-205, Transcript of SHC adaptor protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHC1, Length 3,062 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-205ENST00000368453 RCCD1A6NED2 376 aa16.79■□□□□ 0.28
SHC1-205ENST00000368453 NEBLO76041 1014 aa16.79■□□□□ 0.28
SHC1-205ENST00000368453 HPDP32754 393 aaPredicted RBP16.79■□□□□ 0.28
SHC1-205ENST00000368453 TRIM14Q14142 442 aa16.79■□□□□ 0.28
SHC1-205ENST00000368453 CCDC57Q2TAC2 916 aa16.79■□□□□ 0.28
SHC1-205ENST00000368453 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.79■□□□□ 0.281e-6■■■■■ 31.5
SHC1-205ENST00000368453 PPANQ9NQ55 473 aaKnown RBP16.79■□□□□ 0.28
SHC1-205ENST00000368453 KLC4Q9NSK0 619 aa16.79■□□□□ 0.28
SHC1-205ENST00000368453 TRIM49BA6NDI0 452 aa16.79■□□□□ 0.28
SHC1-205ENST00000368453 ELF1P32519 619 aa16.79■□□□□ 0.28
SHC1-205ENST00000368453 CYLC1P35663 651 aaPredicted RBP16.79■□□□□ 0.28
SHC1-205ENST00000368453 CCDC40Q4G0X9 1142 aa16.79■□□□□ 0.28
SHC1-205ENST00000368453 KIRREL3Q8IZU9 778 aa16.79■□□□□ 0.28
SHC1-205ENST00000368453 AENQ8WTP8 325 aaKnown RBP16.79■□□□□ 0.28
SHC1-205ENST00000368453 VEZTQ9HBM0 779 aa16.79■□□□□ 0.28
SHC1-205ENST00000368453 STRN4Q9NRL3 753 aa16.79■□□□□ 0.28
SHC1-205ENST00000368453 ZSWIM5Q9P217 1185 aa16.79■□□□□ 0.28
SHC1-205ENST00000368453 TMEM2Q9UHN6 1383 aa16.79■□□□□ 0.28
SHC1-205ENST00000368453 E7EVH7 732 aa16.78■□□□□ 0.28
SHC1-205ENST00000368453 FMNL1O95466 1100 aaPredicted RBP16.78■□□□□ 0.28
SHC1-205ENST00000368453 CFAP58Q5T655 872 aa16.78■□□□□ 0.28
SHC1-205ENST00000368453 SPATA20Q8TB22 786 aa16.78■□□□□ 0.28
SHC1-205ENST00000368453 NOC3LQ8WTT2 800 aaKnown RBP16.78■□□□□ 0.28
SHC1-205ENST00000368453 TMEM87BQ96K49 555 aa16.78■□□□□ 0.28
SHC1-205ENST00000368453 RNPC3Q96LT9 517 aaKnown RBP16.78■□□□□ 0.28
SHC1-205ENST00000368453 LY9Q9HBG7 655 aa16.78■□□□□ 0.28
SHC1-205ENST00000368453 SLC24A3Q9HC58 644 aa16.78■□□□□ 0.28
SHC1-205ENST00000368453 GDAQ9Y2T3 454 aa16.78■□□□□ 0.28
SHC1-205ENST00000368453 SLIT1O75093 1534 aa16.78■□□□□ 0.28
SHC1-205ENST00000368453 PXDNQ92626 1479 aa16.78■□□□□ 0.28
SHC1-205ENST00000368453 ZPR1O75312 459 aa16.78■□□□□ 0.28
SHC1-205ENST00000368453 GUCY2FP51841 1108 aa16.78■□□□□ 0.28
SHC1-205ENST00000368453 ZNF579Q8NAF0 562 aaKnown RBP16.78■□□□□ 0.28
SHC1-205ENST00000368453 IGDCC4Q8TDY8 1250 aa16.78■□□□□ 0.28
SHC1-205ENST00000368453 CCDC43Q96MW1 224 aaKnown RBP16.78■□□□□ 0.28
SHC1-205ENST00000368453 LIMA1Q9UHB6 759 aaKnown RBP16.78■□□□□ 0.28
SHC1-205ENST00000368453 SPA17Q15506 151 aa16.78■□□□□ 0.28
SHC1-205ENST00000368453 ZIM3Q96PE6 472 aa16.78■□□□□ 0.28
SHC1-205ENST00000368453 SH3GL2Q99962 352 aa16.78■□□□□ 0.28
SHC1-205ENST00000368453 AGPAT5Q9NUQ2 364 aa16.78■□□□□ 0.28
SHC1-205ENST00000368453 ESYT3A0FGR9 886 aa16.77■□□□□ 0.28
SHC1-205ENST00000368453 SEMA3EO15041 775 aa16.77■□□□□ 0.28
SHC1-205ENST00000368453 SNRPA1P09661 255 aaKnown RBP16.77■□□□□ 0.28
SHC1-205ENST00000368453 LSP1P33241 339 aa16.77■□□□□ 0.28
SHC1-205ENST00000368453 NAA35Q5VZE5 725 aa16.77■□□□□ 0.28
SHC1-205ENST00000368453 KRT26Q7Z3Y9 468 aa16.77■□□□□ 0.28
SHC1-205ENST00000368453 FOXP1Q9H334 677 aaPredicted RBP16.77■□□□□ 0.28
SHC1-205ENST00000368453 CWC25Q9NXE8 425 aaPredicted RBP16.77■□□□□ 0.28
SHC1-205ENST00000368453 GOLGA6L7A0A1B0GV03 622 aa16.77■□□□□ 0.27
SHC1-205ENST00000368453 PRDM1O75626 825 aa16.77■□□□□ 0.27
SHC1-205ENST00000368453 PARP1P09874 1014 aaKnown RBP16.77■□□□□ 0.27
SHC1-205ENST00000368453 FNTAP49354 379 aa16.77■□□□□ 0.27
SHC1-205ENST00000368453 MAGEC2Q9UBF1 373 aaPredicted RBP16.77■□□□□ 0.27
SHC1-205ENST00000368453 ERICH2A1L162 156 aa16.76■□□□□ 0.27
SHC1-205ENST00000368453 RPSAP08865 295 aaKnown RBP16.76■□□□□ 0.27
SHC1-205ENST00000368453 MAATS1Q7Z4T9 603 aa16.76■□□□□ 0.27
SHC1-205ENST00000368453 ANKRD13CQ8N6S4 541 aa16.76■□□□□ 0.27
SHC1-205ENST00000368453 UBAC1Q9BSL1 405 aa16.76■□□□□ 0.27
SHC1-205ENST00000368453 GPR108Q9NPR9 543 aa16.76■□□□□ 0.27
SHC1-205ENST00000368453 LRWD1Q9UFC0 647 aa16.76■□□□□ 0.27
SHC1-205ENST00000368453 PAFAH1B1P43034 410 aa16.76■□□□□ 0.27
SHC1-205ENST00000368453 EPHB4P54760 987 aa16.76■□□□□ 0.27
SHC1-205ENST00000368453 HDLBPQ00341 1268 aaKnown RBP16.76■□□□□ 0.27
SHC1-205ENST00000368453 SF3A3Q12874 501 aaKnown RBP eCLIP16.76■□□□□ 0.272e-7■■■□□ 15.9
SHC1-205ENST00000368453 C8orf74Q6P047 294 aa16.76■□□□□ 0.27
SHC1-205ENST00000368453 IQCA1Q86XH1 822 aa16.76■□□□□ 0.27
SHC1-205ENST00000368453 SPATA4Q8NEY3 305 aa16.76■□□□□ 0.27
SHC1-205ENST00000368453 NAPBQ9H115 298 aa16.76■□□□□ 0.27
SHC1-205ENST00000368453 NHEJ1Q9H9Q4 299 aaPredicted RBP16.76■□□□□ 0.27
SHC1-205ENST00000368453 PHF8Q9UPP1 1060 aa16.76■□□□□ 0.27
SHC1-205ENST00000368453 IFNAR1P17181 557 aa16.76■□□□□ 0.27
SHC1-205ENST00000368453 VAV2P52735 878 aa16.76■□□□□ 0.27
SHC1-205ENST00000368453 RNASE9P60153 205 aaKnown RBP16.76■□□□□ 0.27
SHC1-205ENST00000368453 NFRKBQ6P4R8 1299 aa16.76■□□□□ 0.27
SHC1-205ENST00000368453 CCDC121Q6ZUS5 278 aa16.76■□□□□ 0.27
SHC1-205ENST00000368453 MB21D1Q8N884 522 aa16.76■□□□□ 0.27
SHC1-205ENST00000368453 ZNF473Q8WTR7 871 aaKnown RBP16.76■□□□□ 0.27
SHC1-205ENST00000368453 RAPGEF4Q8WZA2 1011 aa16.76■□□□□ 0.27
SHC1-205ENST00000368453 TRIM47Q96LD4 638 aa16.76■□□□□ 0.27
SHC1-205ENST00000368453 OVOS2A0A0G2JMS6 1433 aa16.75■□□□□ 0.27
SHC1-205ENST00000368453 ADAMTS13Q76LX8 1427 aa16.75■□□□□ 0.27
SHC1-205ENST00000368453 HEG1Q9ULI3 1381 aa16.75■□□□□ 0.27
SHC1-205ENST00000368453 FECHP22830 423 aa16.75■□□□□ 0.27
SHC1-205ENST00000368453 CCDC13Q8IYE1 715 aa16.75■□□□□ 0.27
SHC1-205ENST00000368453 CCDC42Q96M95 316 aa16.75■□□□□ 0.27
SHC1-205ENST00000368453 MLXIPQ9HAP2 919 aa16.75■□□□□ 0.27
SHC1-205ENST00000368453 BCCIPQ9P287 314 aaKnown RBP eCLIP16.75■□□□□ 0.27
SHC1-205ENST00000368453 MRC1P22897 1456 aa16.75■□□□□ 0.27
SHC1-205ENST00000368453 B4DLN1 442 aa16.75■□□□□ 0.27
SHC1-205ENST00000368453 BACH1O14867 736 aa16.75■□□□□ 0.27
SHC1-205ENST00000368453 TACC1O75410 805 aa16.75■□□□□ 0.27
SHC1-205ENST00000368453 FSBPO95073 299 aa16.75■□□□□ 0.27
SHC1-205ENST00000368453 MOCS3O95396 460 aa16.75■□□□□ 0.27
SHC1-205ENST00000368453 DEXIO95424 95 aa16.75■□□□□ 0.27
SHC1-205ENST00000368453 CLNS1AP54105 237 aaKnown RBP16.75■□□□□ 0.27
SHC1-205ENST00000368453 WTAPQ15007 396 aa16.75■□□□□ 0.27
SHC1-205ENST00000368453 WDR59Q6PJI9 974 aa16.75■□□□□ 0.27
SHC1-205ENST00000368453 TTLL7Q6ZT98 887 aa16.75■□□□□ 0.27
SHC1-205ENST00000368453 CCT8L2Q96SF2 557 aa16.75■□□□□ 0.27
SHC1-205ENST00000368453 NLRP2Q9NX02 1062 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms