RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 MFSD6Q6ZSS7 791 aa30.31■■■□□ 2.44
EFNA1-202ENST00000368407 USP50Q70EL3 339 aaPredicted RBP30.31■■■□□ 2.44
EFNA1-202ENST00000368407 SDF4Q9BRK5 362 aa30.31■■■□□ 2.44
EFNA1-202ENST00000368407 DHX36Q9H2U1 1008 aaKnown RBP30.31■■■□□ 2.44
EFNA1-202ENST00000368407 LAMB1P07942 1786 aa30.31■■■□□ 2.44
EFNA1-202ENST00000368407 ROBO3Q96MS0 1386 aa30.3■■■□□ 2.44
EFNA1-202ENST00000368407 SLFN14P0C7P3 912 aa30.3■■■□□ 2.44
EFNA1-202ENST00000368407 NLRP12P59046 1061 aa30.3■■■□□ 2.44
EFNA1-202ENST00000368407 ZRSR1Q15695 479 aaKnown RBP30.3■■■□□ 2.44
EFNA1-202ENST00000368407 HLA-DOAP06340 250 aa30.3■■■□□ 2.44
EFNA1-202ENST00000368407 FDPSP14324 419 aaKnown RBP30.3■■■□□ 2.44
EFNA1-202ENST00000368407 TNFAIP1Q13829 316 aa30.3■■■□□ 2.44
EFNA1-202ENST00000368407 ZNF526Q8TF50 670 aaPredicted RBP30.3■■■□□ 2.44
EFNA1-202ENST00000368407 RRAGCQ9HB90 399 aa30.3■■■□□ 2.44
EFNA1-202ENST00000368407 TNNI2P48788 182 aa30.29■■■□□ 2.44
EFNA1-202ENST00000368407 EAPPQ56P03 285 aaPredicted RBP30.29■■■□□ 2.44
EFNA1-202ENST00000368407 CSRNP1Q96S65 589 aa30.29■■■□□ 2.44
EFNA1-202ENST00000368407 DEFB129Q9H1M3 183 aa30.29■■■□□ 2.44
EFNA1-202ENST00000368407 TOMM22Q9NS69 142 aa30.29■■■□□ 2.44
EFNA1-202ENST00000368407 PGAP2Q9UHJ9 254 aa30.29■■■□□ 2.44
EFNA1-202ENST00000368407 SCN4AP35499 1836 aa30.29■■■□□ 2.44
EFNA1-202ENST00000368407 NAA30Q147X3 362 aaPredicted RBP30.28■■■□□ 2.44
EFNA1-202ENST00000368407 RRP12Q5JTH9 1297 aaKnown RBP30.28■■■□□ 2.44
EFNA1-202ENST00000368407 E4F1Q66K89 784 aaPredicted RBP30.28■■■□□ 2.44
EFNA1-202ENST00000368407 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.28■■■□□ 2.44
EFNA1-202ENST00000368407 COL2A1P02458 1487 aaPredicted RBP30.28■■■□□ 2.44
EFNA1-202ENST00000368407 B4E1Z4 1266 aa30.28■■■□□ 2.44
EFNA1-202ENST00000368407 SLC3A2P08195 630 aaKnown RBP30.28■■■□□ 2.44
EFNA1-202ENST00000368407 FGRP09769 529 aa30.28■■■□□ 2.44
EFNA1-202ENST00000368407 H2AFXP16104 143 aaPredicted RBP30.28■■■□□ 2.44
EFNA1-202ENST00000368407 GABPAQ06546 454 aa30.28■■■□□ 2.44
EFNA1-202ENST00000368407 APOBEC3FQ8IUX4 373 aaKnown RBP30.28■■■□□ 2.44
EFNA1-202ENST00000368407 RNF41Q9H4P4 317 aaPredicted RBP30.28■■■□□ 2.44
EFNA1-202ENST00000368407 PI4KBQ9UBF8 816 aa30.28■■■□□ 2.44
EFNA1-202ENST00000368407 SERPINB13Q9UIV8 391 aa30.28■■■□□ 2.44
EFNA1-202ENST00000368407 FAM196BA6NMK8 535 aa30.27■■■□□ 2.44
EFNA1-202ENST00000368407 SFPQP23246 707 aaKnown RBP eCLIP30.27■■■□□ 2.44
EFNA1-202ENST00000368407 STK38Q15208 465 aa30.27■■■□□ 2.44
EFNA1-202ENST00000368407 C16orf86Q6ZW13 317 aa30.27■■■□□ 2.44
EFNA1-202ENST00000368407 NCOA7Q8NI08 942 aa30.27■■■□□ 2.44
EFNA1-202ENST00000368407 PPP1R13BQ96KQ4 1090 aa30.27■■■□□ 2.44
EFNA1-202ENST00000368407 CCT2P78371 535 aaKnown RBP30.26■■■□□ 2.44
EFNA1-202ENST00000368407 TRDNQ13061 729 aa30.26■■■□□ 2.44
EFNA1-202ENST00000368407 TERF2Q15554 542 aa30.26■■■□□ 2.44
EFNA1-202ENST00000368407 FBXO38Q6PIJ6 1188 aa30.26■■■□□ 2.44
EFNA1-202ENST00000368407 FBXO18Q8NFZ0 1043 aa30.26■■■□□ 2.44
EFNA1-202ENST00000368407 TEPSINQ96N21 525 aa30.26■■■□□ 2.44
EFNA1-202ENST00000368407 DNAJC18Q9H819 358 aa30.26■■■□□ 2.44
EFNA1-202ENST00000368407 PHLPP2Q6ZVD8 1323 aa30.26■■■□□ 2.43
EFNA1-202ENST00000368407 SPTLC2O15270 562 aa30.26■■■□□ 2.43
EFNA1-202ENST00000368407 POTEIP0CG38 1075 aa30.26■■■□□ 2.43
EFNA1-202ENST00000368407 POTEJP0CG39 1038 aa30.26■■■□□ 2.43
EFNA1-202ENST00000368407 CMA1P23946 247 aa30.26■■■□□ 2.43
EFNA1-202ENST00000368407 CDK8P49336 464 aa30.26■■■□□ 2.43
EFNA1-202ENST00000368407 NDUFA8P51970 172 aa30.26■■■□□ 2.43
EFNA1-202ENST00000368407 PDE4BQ07343 736 aa30.26■■■□□ 2.43
EFNA1-202ENST00000368407 CHST3Q7LGC8 479 aa30.26■■■□□ 2.43
EFNA1-202ENST00000368407 RALYLQ86SE5 291 aaKnown RBP30.26■■■□□ 2.43
EFNA1-202ENST00000368407 MB21D2Q8IYB1 491 aaPredicted RBP30.26■■■□□ 2.43
EFNA1-202ENST00000368407 NMRK2Q9NPI5 230 aa30.26■■■□□ 2.43
EFNA1-202ENST00000368407 PRAMEF18Q5VWM3 479 aa30.25■■■□□ 2.43
EFNA1-202ENST00000368407 ZNF771Q7L3S4 317 aaPredicted RBP30.25■■■□□ 2.43
EFNA1-202ENST00000368407 FCHSD1Q86WN1 690 aa30.25■■■□□ 2.43
EFNA1-202ENST00000368407 C8orf76Q96K31 380 aa30.25■■■□□ 2.43
EFNA1-202ENST00000368407 SRRTQ9BXP5 876 aaKnown RBP30.25■■■□□ 2.43
EFNA1-202ENST00000368407 EHD4Q9H223 541 aa30.25■■■□□ 2.43
EFNA1-202ENST00000368407 PITPNM2Q9BZ72 1349 aa30.25■■■□□ 2.43
EFNA1-202ENST00000368407 SIPA1L1O43166 1804 aa30.24■■■□□ 2.43
EFNA1-202ENST00000368407 VEGFAP15692 232 aaPredicted RBP30.24■■■□□ 2.43
EFNA1-202ENST00000368407 MYSM1Q5VVJ2 828 aa30.24■■■□□ 2.43
EFNA1-202ENST00000368407 XPO4Q9C0E2 1151 aaKnown RBP30.24■■■□□ 2.43
EFNA1-202ENST00000368407 CNNM2Q9H8M5 875 aa30.24■■■□□ 2.43
EFNA1-202ENST00000368407 SF3A1Q15459 793 aaKnown RBP30.24■■■□□ 2.43
EFNA1-202ENST00000368407 ELF2Q15723 593 aa30.24■■■□□ 2.43
EFNA1-202ENST00000368407 DPCR1Q3MIW9 517 aa30.24■■■□□ 2.43
EFNA1-202ENST00000368407 ARMCX5Q6P1M9 558 aa30.24■■■□□ 2.43
EFNA1-202ENST00000368407 DLK2Q6UY11 383 aa30.24■■■□□ 2.43
EFNA1-202ENST00000368407 CYB5R4Q7L1T6 521 aa30.24■■■□□ 2.43
EFNA1-202ENST00000368407 PNMA8AQ86V59 439 aaPredicted RBP30.24■■■□□ 2.43
EFNA1-202ENST00000368407 DCPSQ96C86 337 aaKnown RBP30.24■■■□□ 2.43
EFNA1-202ENST00000368407 NCOA5Q9HCD5 579 aaKnown RBP30.24■■■□□ 2.43
EFNA1-202ENST00000368407 FAM237AA0A1B0GTK4 181 aa30.23■■■□□ 2.43
EFNA1-202ENST00000368407 ORC4O43929 436 aa30.23■■■□□ 2.43
EFNA1-202ENST00000368407 BMS1Q14692 1282 aaKnown RBP30.23■■■□□ 2.43
EFNA1-202ENST00000368407 NCAPHQ15003 741 aa30.23■■■□□ 2.43
EFNA1-202ENST00000368407 CRACR2BQ8N4Y2 399 aaPredicted RBP30.23■■■□□ 2.43
EFNA1-202ENST00000368407 KRT23Q9C075 422 aa30.23■■■□□ 2.43
EFNA1-202ENST00000368407 MKNK2Q9HBH9 465 aa30.23■■■□□ 2.43
EFNA1-202ENST00000368407 TRMT1Q9NXH9 659 aaKnown RBP30.23■■■□□ 2.43
EFNA1-202ENST00000368407 CBFA2T2O43439 604 aa30.22■■■□□ 2.43
EFNA1-202ENST00000368407 PCP11498 1178 aaKnown RBP30.22■■■□□ 2.43
EFNA1-202ENST00000368407 ANTXR2P58335 489 aa30.22■■■□□ 2.43
EFNA1-202ENST00000368407 ZC3H15Q8WU90 426 aaKnown RBP30.22■■■□□ 2.43
EFNA1-202ENST00000368407 ZSWIM5Q9P217 1185 aa30.22■■■□□ 2.43
EFNA1-202ENST00000368407 A0A1B0GVL5 298 aa30.22■■■□□ 2.43
EFNA1-202ENST00000368407 RANBP6O60518 1105 aaKnown RBP30.22■■■□□ 2.43
EFNA1-202ENST00000368407 METTL16Q86W50 562 aaKnown RBP30.22■■■□□ 2.43
EFNA1-202ENST00000368407 IFNKQ9P0W0 207 aa30.22■■■□□ 2.43
EFNA1-202ENST00000368407 TUBE1Q9UJT0 475 aa30.22■■■□□ 2.43
EFNA1-202ENST00000368407 RASA1P20936 1047 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms