RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 USP17L19D6RCP7 530 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 USP17L20D6RJB6 530 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 E7EWF7 191 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 SLC27A2O14975 620 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 REC8O95072 547 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 HOXA7P31268 230 aaPredicted RBP11.64□□□□□ -0.55
NUP43-202ENST00000367402 NT5C2P49902 561 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 USP17L24Q0WX57 530 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 NECTIN1Q15223 517 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 KIAA1755Q5JYT7 1200 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 RNF20Q5VTR2 975 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 CREB3L3Q68CJ9 461 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 CATSPERGQ6ZRH7 1159 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 RALYLQ86SE5 291 aaKnown RBP11.64□□□□□ -0.55
NUP43-202ENST00000367402 IQCA1Q86XH1 822 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 LRRC47Q8N1G4 583 aaKnown RBP11.64□□□□□ -0.55
NUP43-202ENST00000367402 NKX2-3Q8TAU0 364 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 ZNF296Q8WUU4 475 aaPredicted RBP11.64□□□□□ -0.55
NUP43-202ENST00000367402 LPAR1Q92633 364 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 MKL1Q969V6 931 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 P2RX7Q99572 595 aaKnown RBP11.64□□□□□ -0.55
NUP43-202ENST00000367402 ZKSCAN3Q9BRR0 538 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 KRTAP3-3Q9BYR6 98 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 KRTAP3-2Q9BYR7 98 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 RPAP3Q9H6T3 665 aaPredicted RBP11.64□□□□□ -0.55
NUP43-202ENST00000367402 TCP11L1Q9NUJ3 509 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 ZSWIM5Q9P217 1185 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 CPA4Q9UI42 421 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 POTEB3A0JP26 581 aa11.63□□□□□ -0.55
NUP43-202ENST00000367402 F5H6K3 240 aa11.63□□□□□ -0.55
NUP43-202ENST00000367402 KLRC3Q07444 240 aa11.63□□□□□ -0.55
NUP43-202ENST00000367402 CCDC178Q5BJE1 867 aa11.63□□□□□ -0.55
NUP43-202ENST00000367402 POTEBQ6S5H4 581 aa11.63□□□□□ -0.55
NUP43-202ENST00000367402 NCOA7Q8NI08 942 aa11.63□□□□□ -0.55
NUP43-202ENST00000367402 CHMP4CQ96CF2 233 aa11.63□□□□□ -0.55
NUP43-202ENST00000367402 ZSCAN10Q96SZ4 725 aaPredicted RBP11.63□□□□□ -0.55
NUP43-202ENST00000367402 UBAC1Q9BSL1 405 aa11.63□□□□□ -0.55
NUP43-202ENST00000367402 TANGO6Q9C0B7 1094 aa11.63□□□□□ -0.55
NUP43-202ENST00000367402 TAF6LQ9Y6J9 622 aa11.63□□□□□ -0.55
NUP43-202ENST00000367402 LAMB1P07942 1786 aa11.63□□□□□ -0.55
NUP43-202ENST00000367402 ATAD5Q96QE3 1844 aa11.63□□□□□ -0.55
NUP43-202ENST00000367402 WDR46O15213 610 aaKnown RBP11.62□□□□□ -0.55
NUP43-202ENST00000367402 FKTNO75072 461 aa11.62□□□□□ -0.55
NUP43-202ENST00000367402 NDUFB10O96000 172 aa11.62□□□□□ -0.55
NUP43-202ENST00000367402 ZKSCAN1P17029 563 aaPredicted RBP11.62□□□□□ -0.55
NUP43-202ENST00000367402 SP3Q02447 781 aa11.62□□□□□ -0.55
NUP43-202ENST00000367402 NOM1Q5C9Z4 860 aaKnown RBP11.62□□□□□ -0.55
NUP43-202ENST00000367402 FAM83BQ5T0W9 1011 aa11.62□□□□□ -0.55
NUP43-202ENST00000367402 SLFN13Q68D06 897 aa11.62□□□□□ -0.55
NUP43-202ENST00000367402 C17orf99Q6UX52 265 aa11.62□□□□□ -0.55
NUP43-202ENST00000367402 STOX1Q6ZVD7 989 aa11.62□□□□□ -0.55
NUP43-202ENST00000367402 ANKRD13CQ8N6S4 541 aa11.62□□□□□ -0.55
NUP43-202ENST00000367402 TTC14Q96N46 770 aa11.62□□□□□ -0.55
NUP43-202ENST00000367402 PRDM10Q9NQV6 1147 aa11.62□□□□□ -0.55
NUP43-202ENST00000367402 ISY1Q9ULR0 285 aaKnown RBP11.62□□□□□ -0.55
NUP43-202ENST00000367402 SYNPO2Q9UMS6 1093 aa11.62□□□□□ -0.55
NUP43-202ENST00000367402 MTMR7Q9Y216 660 aa11.62□□□□□ -0.55
NUP43-202ENST00000367402 PHIPQ8WWQ0 1821 aa11.62□□□□□ -0.55
NUP43-202ENST00000367402 FLOT1O75955 427 aa11.61□□□□□ -0.55
NUP43-202ENST00000367402 ECM2O94769 699 aaPredicted RBP11.61□□□□□ -0.55
NUP43-202ENST00000367402 TOP1P11387 765 aaKnown RBP11.61□□□□□ -0.55
NUP43-202ENST00000367402 MCCP23508 829 aa11.61□□□□□ -0.55
NUP43-202ENST00000367402 GCLCP48506 637 aaPredicted RBP11.61□□□□□ -0.55
NUP43-202ENST00000367402 NOVP48745 357 aa11.61□□□□□ -0.55
NUP43-202ENST00000367402 HERVK_113P62684 666 aa11.61□□□□□ -0.55
NUP43-202ENST00000367402 COG2Q14746 738 aa11.61□□□□□ -0.55
NUP43-202ENST00000367402 KIF22Q14807 665 aa11.61□□□□□ -0.55
NUP43-202ENST00000367402 CYB5R4Q7L1T6 521 aa11.61□□□□□ -0.55
NUP43-202ENST00000367402 CHST3Q7LGC8 479 aa11.61□□□□□ -0.55
NUP43-202ENST00000367402 DGKHQ86XP1 1220 aa11.61□□□□□ -0.55
NUP43-202ENST00000367402 GMCL1P1Q8NEA9 526 aa11.61□□□□□ -0.55
NUP43-202ENST00000367402 NUP88Q99567 741 aaPredicted RBP11.61□□□□□ -0.55
NUP43-202ENST00000367402 TMEM47Q9BQJ4 181 aa11.61□□□□□ -0.55
NUP43-202ENST00000367402 HOXC10Q9NYD6 342 aa11.61□□□□□ -0.55
NUP43-202ENST00000367402 TNKSO95271 1327 aa11.6□□□□□ -0.55
NUP43-202ENST00000367402 ADGRA2Q96PE1 1338 aa11.6□□□□□ -0.55
NUP43-202ENST00000367402 ERICH2A1L162 156 aa11.6□□□□□ -0.55
NUP43-202ENST00000367402 HOXB3P14651 431 aaPredicted RBP11.6□□□□□ -0.55
NUP43-202ENST00000367402 HSPA4P34932 840 aa11.6□□□□□ -0.55
NUP43-202ENST00000367402 SLC1A4P43007 532 aa11.6□□□□□ -0.55
NUP43-202ENST00000367402 RCSD1Q6JBY9 416 aa11.6□□□□□ -0.55
NUP43-202ENST00000367402 ERO1AQ96HE7 468 aa11.6□□□□□ -0.55
NUP43-202ENST00000367402 PAGR1Q9BTK6 254 aa11.6□□□□□ -0.55
NUP43-202ENST00000367402 KAT14Q9H8E8 782 aa11.6□□□□□ -0.55
NUP43-202ENST00000367402 IFIT3O14879 490 aaKnown RBP11.59□□□□□ -0.55
NUP43-202ENST00000367402 PEX10O60683 326 aa11.59□□□□□ -0.55
NUP43-202ENST00000367402 BCRP11274 1271 aa11.59□□□□□ -0.55
NUP43-202ENST00000367402 BMP3P12645 472 aa11.59□□□□□ -0.55
NUP43-202ENST00000367402 HOXB1P14653 301 aaPredicted RBP11.59□□□□□ -0.55
NUP43-202ENST00000367402 MCM5P33992 734 aa11.59□□□□□ -0.55
NUP43-202ENST00000367402 LACTBP83111 547 aaPredicted RBP11.59□□□□□ -0.55
NUP43-202ENST00000367402 KRT32Q14532 448 aa11.59□□□□□ -0.55
NUP43-202ENST00000367402 SART3Q15020 963 aaKnown RBP11.59□□□□□ -0.55
NUP43-202ENST00000367402 ARHGEF6Q15052 776 aa11.59□□□□□ -0.55
NUP43-202ENST00000367402 IFIT1BQ5T764 474 aaKnown RBP11.59□□□□□ -0.55
NUP43-202ENST00000367402 MB21D2Q8IYB1 491 aaPredicted RBP11.59□□□□□ -0.55
NUP43-202ENST00000367402 ENAHQ8N8S7 591 aaPredicted RBP11.59□□□□□ -0.55
NUP43-202ENST00000367402 GPRC5AQ8NFJ5 357 aa11.59□□□□□ -0.55
NUP43-202ENST00000367402 CD99L2Q8TCZ2 262 aa11.59□□□□□ -0.55
NUP43-202ENST00000367402 GTF3C2Q8WUA4 911 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms