RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 SAP30BPQ9UHR5 308 aaKnown RBP9.98□□□□□ -0.81
SYNE1-205ENST00000367251 CFAP65Q6ZU64 1925 aaKnown RBP9.98□□□□□ -0.81
SYNE1-205ENST00000367251 PHLPP2Q6ZVD8 1323 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 TMEM110-MUSTN1A8MSY1 372 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 BCRP11274 1271 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 APBA1Q02410 837 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 GABPAQ06546 454 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 DNAJC21Q5F1R6 531 aaKnown RBP9.98□□□□□ -0.81
SYNE1-205ENST00000367251 FAM47CQ5HY64 1035 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 MYL10Q9BUA6 226 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 TRIM7Q9C029 511 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 TXNDC16Q9P2K2 825 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 DBNLQ9UJU6 430 aaKnown RBP9.98□□□□□ -0.81
SYNE1-205ENST00000367251 hCG_1984214I3L0E3 225 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 ATXN8OSP0DMR3 200 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 SCG2P13521 617 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 TAOK1Q7L7X3 1001 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 C17orf53Q8N3J3 647 aaPredicted RBP9.98□□□□□ -0.81
SYNE1-205ENST00000367251 ZNF713Q8N859 430 aaPredicted RBP9.98□□□□□ -0.81
SYNE1-205ENST00000367251 SUPT20HQ8NEM7 779 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 VPS54Q9P1Q0 977 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 ROBO2Q9HCK4 1378 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 TFAP4Q01664 338 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 MAP7D1Q3KQU3 841 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 DPY19L2Q6NUT2 758 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 CCDC63Q8NA47 563 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 IWS1Q96ST2 819 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 PNPLA6Q8IY17 1366 aa9.98□□□□□ -0.81
SYNE1-205ENST00000367251 GAS8O95995 478 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 NDUFA8P51970 172 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 PLCB3Q01970 1234 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 GOLGA5Q8TBA6 731 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 ALDH8A1Q9H2A2 487 aaPredicted RBP9.97□□□□□ -0.81
SYNE1-205ENST00000367251 CCNL1Q9UK58 526 aaPredicted RBP9.97□□□□□ -0.81
SYNE1-205ENST00000367251 PNMA2Q9UL42 364 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 GOLGA8KD6RF30 607 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 ZEB2O60315 1214 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 CNGA1P29973 690 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 KLHL30Q0D2K2 578 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 RPS6KA1Q15418 735 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 SLFN12Q8IYM2 578 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 RETREG2Q8NC44 543 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 HOOK2Q96ED9 719 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 IFIH1Q9BYX4 1025 aaKnown RBP9.97□□□□□ -0.81
SYNE1-205ENST00000367251 NBPF3Q9H094 633 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 HYOU1Q9Y4L1 999 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 PPFIA4O75335 1185 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 OAS2P29728 719 aaKnown RBP9.97□□□□□ -0.81
SYNE1-205ENST00000367251 CCDC6Q16204 474 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 ZBTB33Q86T24 672 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 SMC6Q96SB8 1091 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 MED4Q9NPJ6 270 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 WDR19Q8NEZ3 1342 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 PDE8BO95263 885 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 TCP1P17987 556 aaKnown RBP9.97□□□□□ -0.81
SYNE1-205ENST00000367251 ADCK5Q3MIX3 580 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 PI4K2BQ8TCG2 481 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 AK8Q96MA6 479 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 SLF1Q9BQI6 1058 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 RAB17Q9H0T7 212 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 FAM169AQ9Y6X4 670 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 TNKSO95271 1327 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 ARHGEF35A5YM69 484 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 RASA3Q14644 834 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 NECTIN1Q15223 517 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 HERC4Q5GLZ8 1057 aaPredicted RBP9.97□□□□□ -0.81
SYNE1-205ENST00000367251 CCT6BQ92526 530 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 RABGGTAQ92696 567 aa9.97□□□□□ -0.81
SYNE1-205ENST00000367251 ABCA6Q8N139 1617 aa9.96□□□□□ -0.81
SYNE1-205ENST00000367251 SPOPO43791 374 aa9.96□□□□□ -0.81
SYNE1-205ENST00000367251 RPS8P62241 208 aaKnown RBP9.96□□□□□ -0.81
SYNE1-205ENST00000367251 UNC5CLQ8IV45 518 aa9.96□□□□□ -0.81
SYNE1-205ENST00000367251 EDC3Q96F86 508 aaKnown RBP9.96□□□□□ -0.81
SYNE1-205ENST00000367251 NDUFB9Q9Y6M9 179 aa9.96□□□□□ -0.81
SYNE1-205ENST00000367251 SMCO2A6NFE2 343 aa9.96□□□□□ -0.81
SYNE1-205ENST00000367251 NOP56O00567 594 aaKnown RBP9.96□□□□□ -0.81
SYNE1-205ENST00000367251 CD2BP2O95400 341 aaKnown RBP9.96□□□□□ -0.81
SYNE1-205ENST00000367251 CYP21A2P08686 494 aa9.96□□□□□ -0.81
SYNE1-205ENST00000367251 OR52Z1P0C646 297 aa9.96□□□□□ -0.81
SYNE1-205ENST00000367251 ZNF526Q8TF50 670 aaPredicted RBP9.96□□□□□ -0.81
SYNE1-205ENST00000367251 FNBP1Q96RU3 617 aa9.96□□□□□ -0.81
SYNE1-205ENST00000367251 N4BP1O75113 896 aaKnown RBP9.96□□□□□ -0.82
SYNE1-205ENST00000367251 PRDM1O75626 825 aa9.96□□□□□ -0.82
SYNE1-205ENST00000367251 HARSP12081 509 aaKnown RBP9.96□□□□□ -0.82
SYNE1-205ENST00000367251 EEF1GP26641 437 aaKnown RBP9.96□□□□□ -0.82
SYNE1-205ENST00000367251 TPD52P55327 224 aaPredicted RBP9.96□□□□□ -0.82
SYNE1-205ENST00000367251 LACTBP83111 547 aaPredicted RBP9.96□□□□□ -0.82
SYNE1-205ENST00000367251 MYOCDQ8IZQ8 938 aa9.96□□□□□ -0.82
SYNE1-205ENST00000367251 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.96□□□□□ -0.82
SYNE1-205ENST00000367251 FEZ2Q9UHY8 353 aaPredicted RBP9.96□□□□□ -0.82
SYNE1-205ENST00000367251 CLIC4Q9Y696 253 aa9.96□□□□□ -0.82
SYNE1-205ENST00000367251 GEN1Q17RS7 908 aa9.96□□□□□ -0.82
SYNE1-205ENST00000367251 UTP14CQ5TAP6 766 aaKnown RBP9.96□□□□□ -0.82
SYNE1-205ENST00000367251 SEC62Q99442 399 aaKnown RBP9.96□□□□□ -0.82
SYNE1-205ENST00000367251 PAIP2Q9BPZ3 127 aaKnown RBP9.96□□□□□ -0.82
SYNE1-205ENST00000367251 NDUFAB1O14561 156 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 RPN1P04843 607 aaKnown RBP9.95□□□□□ -0.82
SYNE1-205ENST00000367251 ATP2B4P23634 1241 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 GBP1P32455 592 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 NEK8Q86SG6 692 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms