RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 IFNL3Q8IZI9 196 aa13.08□□□□□ -0.32
CDC42BPA-202ENST00000366764 ZBTB16Q05516 673 aa13.08□□□□□ -0.32
CDC42BPA-202ENST00000366764 DDB1Q16531 1140 aa13.08□□□□□ -0.32
CDC42BPA-202ENST00000366764 BLIDQ8IZY5 108 aa13.08□□□□□ -0.32
CDC42BPA-202ENST00000366764 TBC1D22AQ8WUA7 517 aa13.08□□□□□ -0.32
CDC42BPA-202ENST00000366764 ZKSCAN3Q9BRR0 538 aa13.08□□□□□ -0.32
CDC42BPA-202ENST00000366764 KCNJ14Q9UNX9 436 aa13.08□□□□□ -0.32
CDC42BPA-202ENST00000366764 CLTCQ00610 1675 aaKnown RBP13.08□□□□□ -0.32
CDC42BPA-202ENST00000366764 RPN1P04843 607 aaKnown RBP13.08□□□□□ -0.32
CDC42BPA-202ENST00000366764 HELBQ8NG08 1087 aaPredicted RBP13.08□□□□□ -0.32
CDC42BPA-202ENST00000366764 CAPS2Q9BXY5 557 aa13.08□□□□□ -0.32
CDC42BPA-202ENST00000366764 RWDD2AQ9UIY3 292 aa13.08□□□□□ -0.32
CDC42BPA-202ENST00000366764 CLIC4Q9Y696 253 aa13.08□□□□□ -0.32
CDC42BPA-202ENST00000366764 KLHL30Q0D2K2 578 aa13.07□□□□□ -0.32
CDC42BPA-202ENST00000366764 TERF2Q15554 542 aa13.07□□□□□ -0.32
CDC42BPA-202ENST00000366764 BICD1Q96G01 975 aa13.07□□□□□ -0.32
CDC42BPA-202ENST00000366764 PDE11AQ9HCR9 933 aa13.07□□□□□ -0.32
CDC42BPA-202ENST00000366764 VPS54Q9P1Q0 977 aa13.07□□□□□ -0.32
CDC42BPA-202ENST00000366764 GAS8O95995 478 aa13.07□□□□□ -0.32
CDC42BPA-202ENST00000366764 CABS1Q96KC9 395 aa13.07□□□□□ -0.32
CDC42BPA-202ENST00000366764 COPB1P53618 953 aaKnown RBP13.07□□□□□ -0.32
CDC42BPA-202ENST00000366764 MAIP1Q8WWC4 291 aa13.07□□□□□ -0.32
CDC42BPA-202ENST00000366764 BCRP11274 1271 aa13.07□□□□□ -0.32
CDC42BPA-202ENST00000366764 INTS8Q75QN2 995 aaKnown RBP13.07□□□□□ -0.32
CDC42BPA-202ENST00000366764 SH2D4AQ9H788 454 aa13.07□□□□□ -0.32
CDC42BPA-202ENST00000366764 ADD1P35611 737 aaKnown RBP13.07□□□□□ -0.32
CDC42BPA-202ENST00000366764 GKAP1Q5VSY0 366 aaPredicted RBP13.07□□□□□ -0.32
CDC42BPA-202ENST00000366764 CNKSR2Q8WXI2 1034 aa13.07□□□□□ -0.32
CDC42BPA-202ENST00000366764 FBXO38Q6PIJ6 1188 aa13.07□□□□□ -0.32
CDC42BPA-202ENST00000366764 USP31Q70CQ4 1352 aa13.07□□□□□ -0.32
CDC42BPA-202ENST00000366764 CLCN6P51797 869 aa13.07□□□□□ -0.32
CDC42BPA-202ENST00000366764 DCAF17Q5H9S7 520 aaPredicted RBP13.07□□□□□ -0.32
CDC42BPA-202ENST00000366764 DDIT3P35638 169 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 C10orf76Q5T2E6 689 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 HIBADHP31937 336 aaKnown RBP13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 SLC8A1P32418 973 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 SMTNP53814 917 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 ALS2CLQ60I27 953 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 ARL6IP4Q66PJ3 421 aaKnown RBP13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 GSTA5Q7RTV2 222 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 RUBCNQ92622 972 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 TSNARE1Q96NA8 513 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 SYNCQ9H7C4 482 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 KCNG1Q9UIX4 513 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 CHAMP1Q96JM3 812 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 B4DLN1 442 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 EPHB4P54760 987 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 RESP18Q5W5W9 173 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 MROH2AA6NES4 1674 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 hCG_1984214I3L0E3 225 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 TEX11Q8IYF3 940 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 ZNF713Q8N859 430 aaPredicted RBP13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 EDC3Q96F86 508 aaKnown RBP13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 NDUFB9Q9Y6M9 179 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 RASSF2P50749 326 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 TSNAXIP1Q2TAA8 658 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 RUNDC3BQ96NL0 473 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 FYB2Q5VWT5 728 aa13.06□□□□□ -0.32
CDC42BPA-202ENST00000366764 BTBD18B2RXH4 712 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 MYL10Q9BUA6 226 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 MMP1P03956 469 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 IWS1Q96ST2 819 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 HOMER3Q9NSC5 361 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 TNKSO95271 1327 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 SOS2Q07890 1332 aaPredicted RBP13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 PDE8BO95263 885 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 XRCC5P13010 732 aaKnown RBP13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 KRT71Q3SY84 523 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 SNX29Q8TEQ0 813 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 EXOC7Q9UPT5 735 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 ADGRB1O14514 1584 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 MYH10P35580 1976 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 DLG5Q8TDM6 1919 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 SPOPO43791 374 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 OR52Z1P0C646 297 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 RRAGAQ7L523 313 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 ARHGAP24Q8N264 748 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 JRKLQ9Y4A0 524 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 ERCC6L2Q5T890 1561 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 NEBLO76041 1014 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 CTDSPL2Q05D32 466 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 SYMPKQ92797 1274 aaKnown RBP13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 SH2B2O14492 632 aaPredicted RBP13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 METTL14Q9HCE5 456 aaKnown RBP13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 ATP2C2O75185 946 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 PTGDRQ13258 359 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 EMBQ6PCB8 327 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 CABP7Q86V35 215 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 SH3BGRP55822 239 aaPredicted RBP13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 DNM3Q9UQ16 869 aa13.05□□□□□ -0.32
CDC42BPA-202ENST00000366764 HERC4Q5GLZ8 1057 aaPredicted RBP13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 RBM26Q5T8P6 1007 aaKnown RBP13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 FAM184BQ9ULE4 1060 aa13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 NSFL1CQ9UNZ2 370 aaKnown RBP13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 SRPRBQ9Y5M8 271 aaKnown RBP13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 N4BP1O75113 896 aaKnown RBP13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 TYW1BQ6NUM6 668 aa13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 MYOCDQ8IZQ8 938 aa13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 CACNA2D3Q8IZS8 1091 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms